From MAILER-DAEMON Tue Apr 15 03:46:35 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WZy4h-0000Mg-0B for mharc-espressomd-maintainer@gnu.org; Tue, 15 Apr 2014 03:46:35 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:46178) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WZy4e-0000MT-DS for espressomd-maintainer@nongnu.org; Tue, 15 Apr 2014 03:46:33 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WZy4d-000237-7c for espressomd-maintainer@nongnu.org; Tue, 15 Apr 2014 03:46:32 -0400 Received: from mail-yh0-x231.google.com ([2607:f8b0:4002:c01::231]:57504) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WZy4d-00022z-3K for espressomd-maintainer@nongnu.org; Tue, 15 Apr 2014 03:46:31 -0400 Received: by mail-yh0-f49.google.com with SMTP id z6so9053379yhz.36 for ; Tue, 15 Apr 2014 00:46:30 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20120113; h=mime-version:sender:in-reply-to:references:date:message-id:subject :from:to:content-type; bh=wylmhLVq5MsSznPv+ixZAoIFYIODZwBa7g0P0JnXlOI=; b=bl2bjaGhliCWIx0+bLz1aGZUyA8APHwOZ55I/IZNtq3+jqGpdR3ly1yHb4tuWysFYj AgTfHcgu9DUgPlJpzEMN9gfvx7aQjSK/C/VIE1Y2/clE0aG/KcHSukRS6M2QXASLjm2n Ezr8gFSiefpFHbHY4fU5FOXD4N7snZtZ53VgaM8ivZdcaAqHyKNz0qW0/ih8tckJaipA RwmWGR5wdebW02/pNMILv+s+YRYSPkvLWekMk5hA4eEs6dyA2upDhpsd7eD8JbFO37UC 3DObF7MPiZhomNM8M5ADdcBjQJhwFvZ0EiFojQ2rMAvr36PC0lL/0JrnceD2BXUmyzlu 9ilA== MIME-Version: 1.0 X-Received: by 10.236.163.8 with SMTP id z8mr298342yhk.43.1397547990561; Tue, 15 Apr 2014 00:46:30 -0700 (PDT) Sender: florianweik@gmail.com Received: by 10.170.216.11 with HTTP; Tue, 15 Apr 2014 00:46:30 -0700 (PDT) In-Reply-To: References: Date: Tue, 15 Apr 2014 09:46:30 +0200 X-Google-Sender-Auth: gLGcvqkqWOY_TDXGcyt0cu8JLiA Message-ID: From: Florian Weik To: ESPResSo maintainers Content-Type: multipart/alternative; boundary=20cf304353a288bdf004f70fffd0 X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2607:f8b0:4002:c01::231 Subject: [Espressomd-maintainer] Fwd: LB Checkpointing X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Tue, 15 Apr 2014 07:46:33 -0000 --20cf304353a288bdf004f70fffd0 Content-Type: text/plain; charset=UTF-8 Und nochmal von der richtigen Adresse: Hallo, ich wollte mal nachfragen wie das jetzt mit dem LB checkpointing ist. Das is ja scheinbar kaputt, und die Loesung die Joost vorgeschlagen hat ist auch nicht gut (https://github.com/espressomd/espresso/pull/140). Wie geht das denn jetzt weiter, weis jemand wie man das richtig fixed? Sonst muessen wir halt das feature rausnehmen :-) Gruss Florian -- Florian Weik florianweik@gmail.com ++49 157 85939252 --20cf304353a288bdf004f70fffd0 Content-Type: text/html; charset=UTF-8 Content-Transfer-Encoding: quoted-printable
Und nochmal von der richtigen Adresse:

Hallo,
ich wollte mal nachfrag= en wie das jetzt mit dem LB checkpointing ist. Das is ja scheinbar kaputt, = und die Loesung die Joost vorgeschlagen hat ist auch nicht gut (https://= github.com/espressomd/espresso/pull/140). Wie geht das denn jetzt weite= r, weis jemand wie man das richtig fixed? Sonst muessen wir halt das featur= e rausnehmen :-)

Gruss Florian

--20cf304353a288bdf004f70fffd0-- From MAILER-DAEMON Tue Apr 15 04:10:39 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WZyRz-0001Ta-PK for mharc-espressomd-maintainer@gnu.org; Tue, 15 Apr 2014 04:10:39 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:51651) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WZyRs-0001T8-T9 for espressomd-maintainer@nongnu.org; Tue, 15 Apr 2014 04:10:38 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WZyRn-00041y-4e for espressomd-maintainer@nongnu.org; Tue, 15 Apr 2014 04:10:32 -0400 Received: from hydra.rus.uni-stuttgart.de ([129.69.192.3]:47013) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WZyRm-00041D-Tr for espressomd-maintainer@nongnu.org; Tue, 15 Apr 2014 04:10:27 -0400 Received: from localhost (localhost [127.0.0.1]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP id 5306312C7FE for ; Tue, 15 Apr 2014 10:10:24 +0200 (CEST) X-Virus-Scanned: by amavisd-new at hydra.rus.uni-stuttgart.de Received: from hydra.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (hydra.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id EuRhODJ96p73 for ; Tue, 15 Apr 2014 10:10:20 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (smtp.icp.uni-stuttgart.de [129.69.120.76]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Tue, 15 Apr 2014 10:10:20 +0200 (CEST) Received: from caribou.icp.uni-stuttgart.de (caribou.icp.uni-stuttgart.de [129.69.120.56]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTPS id 3DBB3A40D1; Tue, 15 Apr 2014 10:10:20 +0200 (CEST) Message-ID: <534CE96C.1040905@icp.uni-stuttgart.de> Date: Tue, 15 Apr 2014 10:10:20 +0200 From: Axel Arnold User-Agent: Mozilla/5.0 (X11; Linux x86_64; rv:24.0) Gecko/20100101 Thunderbird/24.3.0 MIME-Version: 1.0 To: Florian Weik , espressomd-maintainer@nongnu.org References: In-Reply-To: Content-Type: text/plain; charset=ISO-8859-1 Content-Transfer-Encoding: quoted-printable X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.3 Subject: Re: [Espressomd-maintainer] Fwd: LB Checkpointing X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Tue, 15 Apr 2014 08:10:38 -0000 On 04/15/2014 09:46 AM, Florian Weik wrote: > Und nochmal von der richtigen Adresse: > > Hallo, > ich wollte mal nachfragen wie das jetzt mit dem LB checkpointing ist. > Das is ja scheinbar kaputt, und die Loesung die Joost vorgeschlagen > hat ist auch nicht gut > (https://github.com/espressomd/espresso/pull/140). Wie geht das denn > jetzt weiter, weis jemand wie man das richtig fixed? Sonst muessen wir > halt das feature rausnehmen :-) Der Fix ist einfach - wir machen einen manuellen reuse-forces-Flag fuer integrate, damit der Benutzer die Verantwortung uebernimmt. Alles andere ist unrealistisch, weil wir nie sicher rauskriegen koennen, ob sich nicht nach dem Setzen der Kraefte doch noch was getan hat, was diese unsinnig macht. Dann kann auch das ganze Gehacke aus dem LB raus. Und ja, benutzen sollte man das auf gar keinen Fall. In der aktuellen Version gibt es keine Verletlisten, bis ein Teilchen das erste Mal ueber den Skin diffundiert ist... Axel --=20 JP Dr. Axel Arnold ICP, Universit=E4t Stuttgart Allmandring 3 70569 Stuttgart, Germany Email: arnolda@icp.uni-stuttgart.de Tel: +49 711 685 67609 From MAILER-DAEMON Tue Apr 15 04:15:04 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WZyWG-0002Nt-3t for mharc-espressomd-maintainer@gnu.org; Tue, 15 Apr 2014 04:15:04 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:53107) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WZyWE-0002Ki-6F for espressomd-maintainer@nongnu.org; Tue, 15 Apr 2014 04:15:03 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WZyWD-000681-3v for espressomd-maintainer@nongnu.org; Tue, 15 Apr 2014 04:15:02 -0400 Received: from mail-yh0-x22c.google.com ([2607:f8b0:4002:c01::22c]:55864) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WZyWC-00067s-VX for espressomd-maintainer@nongnu.org; Tue, 15 Apr 2014 04:15:01 -0400 Received: by mail-yh0-f44.google.com with SMTP id f10so9066572yha.17 for ; Tue, 15 Apr 2014 01:15:00 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20120113; h=mime-version:sender:in-reply-to:references:date:message-id:subject :from:to:cc:content-type; bh=aucyU/AfrcBuvXsYr8+ehvbf/DCp548xLo63EypgTyQ=; b=w6jVcsnmVPO+e/+ccyIric3KLQK24jaj1lokmnPKzhqUkt+fdRBs/3F6obGZoI2j22 1dZXjbmaTYIQKuuH8/SJ2jTEiEiFamQlyahPpeKo8iczCkPi6kFvS+Sl3yZzA3LSfry0 hrGy7SvhHM5jeIxZePCQqcVd9HZUaVglaEeCmUKURwpUmqkLuLemZA4r0Uh4q3UlnFiG KyZ5Z+/4Lx2pfjLHCbC+bNA1LzvKcjKuWLvRI3SyEfgrZwm1rnBHzAeemZyeUIx570sE iXCXtl8gDV1Lklm+4M+GIw/QqZXPKqFerBl8T5AfHa12T8tnyxevs+hJBlHug5SNuyyE MLFQ== MIME-Version: 1.0 X-Received: by 10.236.62.195 with SMTP id y43mr377257yhc.137.1397549700407; Tue, 15 Apr 2014 01:15:00 -0700 (PDT) Sender: florianweik@gmail.com Received: by 10.170.216.11 with HTTP; Tue, 15 Apr 2014 01:15:00 -0700 (PDT) In-Reply-To: <534CE96C.1040905@icp.uni-stuttgart.de> References: <534CE96C.1040905@icp.uni-stuttgart.de> Date: Tue, 15 Apr 2014 10:15:00 +0200 X-Google-Sender-Auth: OUkkObNlyWOmUyt8K6ihYMTG1LY Message-ID: From: Florian Weik To: Axel Arnold Content-Type: multipart/alternative; boundary=089e0115efaa72e6e104f71065f8 X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2607:f8b0:4002:c01::22c Cc: ESPResSo maintainers Subject: Re: [Espressomd-maintainer] Fwd: LB Checkpointing X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Tue, 15 Apr 2014 08:15:03 -0000 --089e0115efaa72e6e104f71065f8 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: quoted-printable Ok, dann ist noch die Frage wie das passiert. Ich hab da nicht genug Ahnung vom lb code um das zu machen. 2014-04-15 10:10 GMT+02:00 Axel Arnold : > On 04/15/2014 09:46 AM, Florian Weik wrote: > > Und nochmal von der richtigen Adresse: > > > > Hallo, > > ich wollte mal nachfragen wie das jetzt mit dem LB checkpointing ist. > > Das is ja scheinbar kaputt, und die Loesung die Joost vorgeschlagen > > hat ist auch nicht gut > > (https://github.com/espressomd/espresso/pull/140). Wie geht das denn > > jetzt weiter, weis jemand wie man das richtig fixed? Sonst muessen wir > > halt das feature rausnehmen :-) > > Der Fix ist einfach - wir machen einen manuellen reuse-forces-Flag fuer > integrate, damit der Benutzer die Verantwortung uebernimmt. Alles andere > ist unrealistisch, weil wir nie sicher rauskriegen koennen, ob sich > nicht nach dem Setzen der Kraefte doch noch was getan hat, was diese > unsinnig macht. Dann kann auch das ganze Gehacke aus dem LB raus. > > Und ja, benutzen sollte man das auf gar keinen Fall. In der aktuellen > Version gibt es keine Verletlisten, bis ein Teilchen das erste Mal ueber > den Skin diffundiert ist... > > Axel > > -- > JP Dr. Axel Arnold > ICP, Universit=C3=A4t Stuttgart > Allmandring 3 > 70569 Stuttgart, Germany > Email: arnolda@icp.uni-stuttgart.de > Tel: +49 711 685 67609 > > --089e0115efaa72e6e104f71065f8 Content-Type: text/html; charset=UTF-8 Content-Transfer-Encoding: quoted-printable
Ok, dann ist noch die Frage wie das passiert. Ich hab da n= icht genug Ahnung vom lb code um das zu machen.



2014-04-15 10:10 GMT+02:00 = Axel Arnold <arnolda@icp.uni-stuttgart.de>:
On 04/15/2014 09:46 AM, Flor= ian Weik wrote:
> Und nochmal von der richtigen Adresse:
>
> Hallo,
> ich wollte mal nachfragen wie das jetzt mit dem LB checkpointing ist.<= br> > Das is ja scheinbar kaputt, und die Loesung die Joost vorgeschlagen > hat ist auch nicht gut
> (https://github.com/espressomd/espresso/pull/140). Wie geht das= denn
> jetzt weiter, weis jemand wie man das richtig fixed? Sonst muessen wir=
> halt das feature rausnehmen :-)

Der Fix ist einfach - wir machen einen manuellen reuse-forces-Flag fu= er
integrate, damit der Benutzer die Verantwortung uebernimmt. Alles andere ist unrealistisch, weil wir nie sicher rauskriegen koennen, ob sich
nicht nach dem Setzen der Kraefte doch noch was getan hat, was diese
unsinnig macht. Dann kann auch das ganze Gehacke aus dem LB raus.

Und ja, benutzen sollte man das auf gar keinen Fall. In der aktuellen
Version gibt es keine Verletlisten, bis ein Teilchen das erste Mal ueber den Skin diffundiert ist...

Axel

--
JP Dr. Axel Arnold
ICP, Universit=C3=A4t Stuttgart
Allmandring 3
70569 Stuttgart, Germany
Email: arnolda@icp.uni-stut= tgart.de
Tel: +49= 711 685 67609


--089e0115efaa72e6e104f71065f8-- From MAILER-DAEMON Tue Apr 15 04:17:36 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WZyYi-0003WO-Et for mharc-espressomd-maintainer@gnu.org; Tue, 15 Apr 2014 04:17:36 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:53380) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WZyYb-0003VM-VL for espressomd-maintainer@nongnu.org; Tue, 15 Apr 2014 04:17:35 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WZyYV-0007TZ-Su for espressomd-maintainer@nongnu.org; Tue, 15 Apr 2014 04:17:29 -0400 Received: from medousa.rus.uni-stuttgart.de ([129.69.192.4]:42954) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WZyYV-0007TQ-Jr for espressomd-maintainer@nongnu.org; Tue, 15 Apr 2014 04:17:23 -0400 Received: from localhost (localhost [127.0.0.1]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP id A5ACC37F07 for ; Tue, 15 Apr 2014 10:17:22 +0200 (CEST) X-Virus-Scanned: by amavisd-new at medousa.rus.uni-stuttgart.de Received: from medousa.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (medousa.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id tklvkVEhGbwB for ; Tue, 15 Apr 2014 10:17:18 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (imap.icp.uni-stuttgart.de [129.69.120.76]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Tue, 15 Apr 2014 10:17:18 +0200 (CEST) Received: from caribou.icp.uni-stuttgart.de (caribou.icp.uni-stuttgart.de [129.69.120.56]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTPS id 88D43A40D1; Tue, 15 Apr 2014 10:17:18 +0200 (CEST) Message-ID: <534CEB0E.5000900@icp.uni-stuttgart.de> Date: Tue, 15 Apr 2014 10:17:18 +0200 From: Axel Arnold User-Agent: Mozilla/5.0 (X11; Linux x86_64; rv:24.0) Gecko/20100101 Thunderbird/24.3.0 MIME-Version: 1.0 To: Florian Weik References: <534CE96C.1040905@icp.uni-stuttgart.de> In-Reply-To: Content-Type: multipart/alternative; boundary="------------060303030709010103000902" X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.4 Cc: ESPResSo maintainers Subject: Re: [Espressomd-maintainer] Fwd: LB Checkpointing X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Tue, 15 Apr 2014 08:17:35 -0000 This is a multi-part message in MIME format. --------------060303030709010103000902 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: quoted-printable On 04/15/2014 10:15 AM, Florian Weik wrote: > Ok, dann ist noch die Frage wie das passiert. Ich hab da nicht genug > Ahnung vom lb code um das zu machen. > Ich mach das, wenn ich Zeit habe. War Owen und Joost zu kompliziert, dann muessen sie halt warten. Allerdings aendere ich wohl nur den Integrator, und raeume bei der Gelegenheit mal wieder die Kraftberechnungsteile dorthin, wo sie gehoeren, naemlich forces.c. Viele Gruesse, Axel > > 2014-04-15 10:10 GMT+02:00 Axel Arnold >: > > On 04/15/2014 09:46 AM, Florian Weik wrote: > > Und nochmal von der richtigen Adresse: > > > > Hallo, > > ich wollte mal nachfragen wie das jetzt mit dem LB checkpointing > ist. > > Das is ja scheinbar kaputt, und die Loesung die Joost vorgeschlag= en > > hat ist auch nicht gut > > (https://github.com/espressomd/espresso/pull/140). Wie geht das d= enn > > jetzt weiter, weis jemand wie man das richtig fixed? Sonst > muessen wir > > halt das feature rausnehmen :-) > > Der Fix ist einfach - wir machen einen manuellen reuse-forces-Flag > fuer > integrate, damit der Benutzer die Verantwortung uebernimmt. Alles > andere > ist unrealistisch, weil wir nie sicher rauskriegen koennen, ob sich > nicht nach dem Setzen der Kraefte doch noch was getan hat, was dies= e > unsinnig macht. Dann kann auch das ganze Gehacke aus dem LB raus. > > Und ja, benutzen sollte man das auf gar keinen Fall. In der aktuell= en > Version gibt es keine Verletlisten, bis ein Teilchen das erste Mal > ueber > den Skin diffundiert ist... > > Axel > > -- > JP Dr. Axel Arnold > ICP, Universit=C3=A4t Stuttgart > Allmandring 3 > 70569 Stuttgart, Germany > Email: arnolda@icp.uni-stuttgart.de > > Tel: +49 711 685 67609 > > --=20 JP Dr. Axel Arnold ICP, Universit=C3=A4t Stuttgart Allmandring 3 70569 Stuttgart, Germany Email: arnolda@icp.uni-stuttgart.de Tel: +49 711 685 67609 --------------060303030709010103000902 Content-Type: text/html; charset=UTF-8 Content-Transfer-Encoding: quoted-printable
On 04/15/2014 10:15 AM, Florian Weik wrote:
Ok, dann ist noch die Frage wie das passiert. Ich hab da nicht genug Ahnung vom lb code um das zu machen.


Ich mach das, wenn ich Zeit habe. War Owen und Joost zu kompliziert, dann muessen sie halt warten. Allerdings aendere ich wohl nur den Integrator, und raeume bei der Gelegenheit mal wieder die Kraftberechnungsteile dorthin, wo sie gehoeren, naemlich forces.c.
Viele Gruesse,
Axel


2014-04-15 10:10 GMT+02:00 Axel Arnold <arnolda@icp.uni-stuttgart.de>:
On 04/15/2014 09:46 AM, Florian Weik wrote: > Und nochmal von der richtigen Adresse:
>
> Hallo,
> ich wollte mal nachfragen wie das jetzt mit dem LB checkpointing ist.
> Das is ja scheinbar kaputt, und die Loesung die Joost vorgeschlagen
> hat ist auch nicht gut
> (https://github.com/espressomd/espresso/= pull/140). Wie geht das denn
> jetzt weiter, weis jemand wie man das richtig fixed? Sonst muessen wir
> halt das feature rausnehmen :-)

Der Fix ist einfach - wir machen einen manuellen reuse-forces-Flag fuer
integrate, damit der Benutzer die Verantwortung uebernimmt. Alles andere
ist unrealistisch, weil wir nie sicher rauskriegen koennen, ob sich
nicht nach dem Setzen der Kraefte doch noch was getan hat, was diese
unsinnig macht. Dann kann auch das ganze Gehacke aus dem LB raus.

Und ja, benutzen sollte man das auf gar keinen Fall. In der aktuellen
Version gibt es keine Verletlisten, bis ein Teilchen das erste Mal ueber
den Skin diffundiert ist...

Axel

--
JP Dr. Axel Arnold
ICP, Universit=C3=A4t Stuttgart
Allmandring 3
70569 Stuttgart, Germany
Email: arnolda@ic= p.uni-stuttgart.de
Tel: +49 711 685 67609




--=20
JP Dr. Axel Arnold
ICP, Universit=C3=A4t Stuttgart
Allmandring 3
70569 Stuttgart, Germany
Email: arnolda@icp.uni-stuttgart.de
Tel: +49 711 685 67609
--------------060303030709010103000902-- From MAILER-DAEMON Tue Apr 22 07:43:55 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WcZ7D-0006pj-8R for mharc-espressomd-maintainer@gnu.org; Tue, 22 Apr 2014 07:43:55 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:45009) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WZxxm-0004oa-Q0 for espressomd-maintainer@nongnu.org; Tue, 15 Apr 2014 03:39:27 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WZxxl-0007lk-SS for espressomd-maintainer@nongnu.org; Tue, 15 Apr 2014 03:39:26 -0400 Received: from mail-yh0-x235.google.com ([2607:f8b0:4002:c01::235]:48765) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WZxxl-0007lg-Mm for espressomd-maintainer@nongnu.org; Tue, 15 Apr 2014 03:39:25 -0400 Received: by mail-yh0-f53.google.com with SMTP id i57so7448424yha.40 for ; Tue, 15 Apr 2014 00:39:24 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20120113; h=mime-version:date:message-id:subject:from:to:content-type; bh=Lx62JP0pWSeDmYn8iQb/L1jMMLfYKazFUMaqHA+Lb4c=; b=imv4yjEhQaKbs0uUAviAtOoD7YJQCxzn4E0buY7K9g0YGXCr4VRFQi0ssvrnYni6ih gwARLJ8XShAFBWW0JDn39KCVi998bWimNm74Hzbf1uPzvlu9ewttW8mqTFGNKFUWcrVT XLPDzejcX2v2ZAEs/hMLdYgSJEONVzoMAXhGRfSFQqyrPgwX6yQYxPFgQkdo1DWy/Zxf RTY6zVZD0gSyWQ5mGzvSF4qvgEf7xG/MBB9snNZuouM4ABDL6gL74uQ3SnM5hysJ6j7b pTIwsbWTPS4TSvLZw8i2FvDF4JEAwx/7oOy5Ql/+QiwO81ShG8eI21c834+ekgEMDT4u xs7A== MIME-Version: 1.0 X-Received: by 10.236.132.134 with SMTP id o6mr166186yhi.147.1397547564724; Tue, 15 Apr 2014 00:39:24 -0700 (PDT) Received: by 10.170.216.11 with HTTP; Tue, 15 Apr 2014 00:39:24 -0700 (PDT) Date: Tue, 15 Apr 2014 09:39:24 +0200 Message-ID: From: Florian Weik To: ESPResSo maintainers Content-Type: multipart/alternative; boundary=14dae907fe6026f88804f70fe631 X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2607:f8b0:4002:c01::235 X-Mailman-Approved-At: Tue, 22 Apr 2014 07:43:54 -0400 Subject: [Espressomd-maintainer] LB Checkpointing X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Tue, 15 Apr 2014 07:39:27 -0000 --14dae907fe6026f88804f70fe631 Content-Type: text/plain; charset=UTF-8 Hallo, ich wollte mal nachfragen wie das jetzt mit dem LB checkpointing ist. Das is ja scheinbar kaputt, und die Loesung die Joost vorgeschlagen hat ist auch nicht gut (https://github.com/espressomd/espresso/pull/140). Wie geht das denn jetzt weiter, weis jemand wie man das richtig fixed? Sonst muessen wir halt das feature rausnehmen :-) Gruss Florian -- Florian Weik florianweik@gmail.com ++49 157 85939252 --14dae907fe6026f88804f70fe631 Content-Type: text/html; charset=UTF-8 Content-Transfer-Encoding: quoted-printable
Hallo,
ich wollte mal nachfragen wie das jetzt mit= dem LB checkpointing ist. Das is ja scheinbar kaputt, und die Loesung die = Joost vorgeschlagen hat ist auch nicht gut (https://github.com/espressomd/espresso/pull/14= 0). Wie geht das denn jetzt weiter, weis jemand wie man das richtig fix= ed? Sonst muessen wir halt das feature rausnehmen :-)

Gruss Florian

--
Florian Weik<= br>
florianwe= ik@gmail.com
++49 157 85939252

--14dae907fe6026f88804f70fe631-- From MAILER-DAEMON Tue Apr 22 07:52:47 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WcZFn-0002Ai-A2 for mharc-espressomd-maintainer@gnu.org; Tue, 22 Apr 2014 07:52:47 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:37344) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WcZFk-0002Ac-RV for espressomd-maintainer@nongnu.org; Tue, 22 Apr 2014 07:52:46 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WcZFi-00083R-Sy for espressomd-maintainer@nongnu.org; Tue, 22 Apr 2014 07:52:44 -0400 Received: from mail-la0-x234.google.com ([2a00:1450:4010:c03::234]:45688) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WcZFi-000839-Jp for espressomd-maintainer@nongnu.org; Tue, 22 Apr 2014 07:52:42 -0400 Received: by mail-la0-f52.google.com with SMTP id el20so782696lab.25 for ; Tue, 22 Apr 2014 04:52:40 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20120113; h=mime-version:sender:in-reply-to:references:from:date:message-id :subject:to:cc:content-type; bh=WK2r9nwrxUOB0zSBO+2xSFVAxRk0FsICkKAHSOOvG3Q=; b=JYZv6nLNC7xmXtuAq7kvxOZzSqNzEULg/9r15lcc5t2Kn9u8xeMreQ9xp46ZDizhYN 7pcNJjpqAxJMxmqQkr7pfCvbdgILIRtleV8G1rlONcgCpwVLEHj8RTe8cVdfz8NrMpcF UvlPiAFuyN1znsu5QN1mdeJYkQIfdj87vDe/tDOdiwGY1pyW8jHIbjQv3OrLQ1HBvl3c c5AUhUFJrkHP2GrkqYLXPCg4vmsFoqg3+S0Ronr2JHOd7/DjKVkwpLQSFE8JBaS6fkh9 koh9rt7cnyBpcseLig8yrPKBoyaGR3voCR/a+epltHexithqKxMpu9incFgarKSelqtt cu9g== X-Received: by 10.152.7.8 with SMTP id f8mr1860689laa.39.1398167560550; Tue, 22 Apr 2014 04:52:40 -0700 (PDT) MIME-Version: 1.0 Sender: olaf.lenz@gmail.com Received: by 10.112.136.234 with HTTP; Tue, 22 Apr 2014 04:52:19 -0700 (PDT) In-Reply-To: References: From: Olaf Lenz Date: Tue, 22 Apr 2014 13:52:19 +0200 X-Google-Sender-Auth: _NazNsI6FJBYWLCSU529VomD_cU Message-ID: To: Florian Weik Content-Type: multipart/alternative; boundary=001a11c2a0f4c87c7e04f7a0407b X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2a00:1450:4010:c03::234 Cc: ESPResSo maintainers Subject: Re: [Espressomd-maintainer] LB Checkpointing X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Tue, 22 Apr 2014 11:52:46 -0000 --001a11c2a0f4c87c7e04f7a0407b Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: quoted-printable Die Mail habe iche gerade aus der Queue losgelassen, einfach ignorieren. Olaf Am 15. April 2014 09:39 schrieb Florian Weik : > Hallo, > ich wollte mal nachfragen wie das jetzt mit dem LB checkpointing ist. Das > is ja scheinbar kaputt, und die Loesung die Joost vorgeschlagen hat ist > auch nicht gut (https://github.com/espressomd/espresso/pull/140). Wie > geht das denn jetzt weiter, weis jemand wie man das richtig fixed? Sonst > muessen wir halt das feature rausnehmen :-) > > Gruss Florian > > -- > Florian Weik > > florianweik@gmail.com > ++49 157 85939252 > > > _______________________________________________ > Espressomd-maintainer mailing list > Espressomd-maintainer@nongnu.org > https://lists.nongnu.org/mailman/listinfo/espressomd-maintainer > > --=20 Dr. rer. nat. Olaf Lenz Institut f=C3=BCr Computerphysik, Allmandring 3, D-70569 Stuttgart Phone: +49-711-685-63607 --001a11c2a0f4c87c7e04f7a0407b Content-Type: text/html; charset=UTF-8 Content-Transfer-Encoding: quoted-printable
Die Mail habe iche gerade aus der Queue losgelassen, einfa= ch ignorieren.
Olaf


Am 15. April 2014 09:39 schrieb Florian Weik <fl= orianweik@gmail.com>:
Hallo,
ich wollte m= al nachfragen wie das jetzt mit dem LB checkpointing ist. Das is ja scheinb= ar kaputt, und die Loesung die Joost vorgeschlagen hat ist auch nicht gut (= https://github.com/espressomd/espresso/pull/140). Wie geht das denn = jetzt weiter, weis jemand wie man das richtig fixed? Sonst muessen wir halt= das feature rausnehmen :-)

Gruss Florian

_______________________________________________
Espressomd-maintainer mailing list
Espressomd-maintainer@n= ongnu.org
https://lists.nongnu.org/mailman/listinfo/espressomd-mai= ntainer




--
Dr. rer. nat. Olaf Lenz
Institut f=C3=BCr Compu= terphysik, Allmandring 3, D-70569 Stuttgart
Phone: +49-711-685-63= 607
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Needs proper fix in the future. ------------------------------------------ [...truncated 126 lines...] checking for mpic++ option to produce PIC... -fPIC -DPIC checking if mpic++ PIC flag -fPIC -DPIC works... yes checking if mpic++ static flag -static works... no checking if mpic++ supports -c -o file.o... yes checking if mpic++ supports -c -o file.o... (cached) yes checking whether the mpic++ linker (/usr/x86_64-suse-linux/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for gawk... (cached) gawk checking for egrep... 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(cached) yes checking types of arguments for select... int,fd_set *,struct timeval * checking for size_t... yes checking for working strtod... yes checking for atexit... yes checking for floor... yes checking for getcwd... yes checking for gethostbyname... yes checking for memset... yes checking for pow... yes checking for rint... yes checking for select... yes checking for socket... yes checking for sqrt... yes **************************************************************** * Checking for required tools and libraries * **************************************************************** checking whether to use FFTW... no checking whether to use CUDA... no checking for nvcc... /bin/false **************************************************************** * Checking for Python * **************************************************************** checking for a Python interpreter with version >= 2.5... python checking for python... /usr/local/bin/python checking for python version... 2.7 checking for python platform... linux2 checking for python script directory... ${prefix}/lib/python2.7/site-packages checking for python extension module directory... ${exec_prefix}/lib/python2.7/site-packages checking whether python -B works... yes checking whether to build the python interface... no **************************************************************** * Checking for Tcl/Tk * **************************************************************** checking whether to build the Tcl interface... yes checking for libtcl8.6... no checking for libtcl8.5... yes checking for tcl.h... yes checking whether to use Tk... yes **************************************************************** * Other settings * **************************************************************** checking whether to use efence... no checking whether the variable MYCONFIG is set... no checking the number of available CPUs... 8 **************************************************************** * Creating output files * **************************************************************** checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating config/Makefile config.status: creating config/myconfig-sample-header.hpp config.status: creating src/Makefile config.status: creating src/tcl/Makefile config.status: creating src/python/Makefile config.status: creating tools/Makefile config.status: creating scripts/Makefile config.status: creating testsuite/Makefile config.status: creating doc/Makefile config.status: creating doc/logo/Makefile config.status: creating doc/ug/Makefile config.status: creating doc/dg/Makefile config.status: creating doc/doxygen/Makefile config.status: creating doc/tutorials/Makefile config.status: creating doc/tutorials/01-lennard_jones/Makefile config.status: creating doc/tutorials/02-charged_system/Makefile config.status: creating doc/tutorials/03-object_in_fluid/Makefile config.status: creating doc/latexit.sh config.status: creating testsuite/runtest.sh config.status: creating tools/es_mpiexec config.status: creating src/acconfig.hpp config.status: executing depfiles commands config.status: executing libtool commands config.status: executing myconfig-sample.hpp commands **************************************************************** * Configuration summary * **************************************************************** platform detected = x86_64-unknown-linux-gnu package version = 3.2.0-788-gfd9f02e development sources = yes Compiler -------- compiler = mpic++ linker = /usr/x86_64-suse-linux/bin/ld -m elf_x86_64 c++ compiler flags = -Wall -O5 c++ preprocessor flags = linker flags = libraries = -ltcl8.5 -lm using debug flags = using profiling flags = Libraries --------- FFTW = no efence = no Tcl/Tk ------ Tcl version = tcl8.5 Tk version = none Python ------ python = /usr/local/bin/python -B build python interface = no Other settings -------------- config = myconfig.hpp installation prefix = /home/jenkins/Espresso number of test tasks = 8 mympiexec = mpiexec = /usr/lib64/mpi/gcc/openmpi/bin/mpiexec pdflatex = /usr/bin/pdflatex makeindex = /usr/bin/makeindex bibtex = /usr/bin/bibtex doxygen = /usr/bin/doxygen dot = /usr/bin/dot CUDA disabled or not supported. Not building Python interface. END CONFIGURE + maintainer/jenkins/build.sh 31977 (process ID) old priority 0, new priority 5 srcdir= builddir= insource=true START BUILD myconfig=maxset build_procs=4 Copying maxset.hpp to >make -j 4 Making all in config make[1]: Entering directory ` make[1]: Nothing to be done for `all'. make[1]: Leaving directory ` Making all in src make[1]: Entering directory ` GEN config-features.hpp GEN config-features.cpp GEN myconfig-final.hpp <= ../myconfig.hpp make all-recursive make[2]: Entering directory ` Making all in . make[3]: Entering directory ` CXX config-features.lo CXX cells.lo CXX collision.lo CXX communication.lo CXX comfixed.lo CXX comforce.lo CXX constraint.lo CXX cuda_interface.lo In file included from communication.cpp:67:0: EspressoSystemInterface.hpp: In member function 'void EspressoSystemInterface::enableParticleCommunication()': EspressoSystemInterface.hpp:116:51: error: 'gpu_get_global_particle_vars_pointer_host' was not declared in this scope EspressoSystemInterface.hpp:119:30: error: 'gpu_init_particle_comm' was not declared in this scope EspressoSystemInterface.hpp:120:37: error: 'cuda_bcast_global_part_params' was not declared in this scope EspressoSystemInterface.hpp: At global scope: EspressoSystemInterface.hpp:162:32: error: cannot declare variable 'espressoSystemInterface' to be of abstract type 'EspressoSystemInterface' In file included from communication.cpp:67:0: EspressoSystemInterface.hpp:10:7: note: because the following virtual functions are pure within 'EspressoSystemInterface': In file included from cuda_interface.hpp:24:0, from communication.cpp:66: SystemInterface.hpp:123:24: note: virtual unsigned int SystemInterface::npart_gpu() CXX debug.lo make[3]: *** [communication.lo] Error 1 make[3]: *** Waiting for unfinished jobs.... make[3]: Leaving directory ` make[2]: *** [all-recursive] Error 1 make[2]: Leaving directory ` make[1]: *** [all] Error 2 make[1]: Leaving directory ` make: *** [all-recursive] Error 1 + exit 1 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE Archiving artifacts From MAILER-DAEMON Tue Apr 22 22:14:27 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1Wcmhf-0001Z8-3O for mharc-espressomd-maintainer@gnu.org; Tue, 22 Apr 2014 22:14:27 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:44104) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WcmhX-0001Yd-Bu for espressomd-maintainer@nongnu.org; Tue, 22 Apr 2014 22:14:26 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WcmhP-0007ha-4x for espressomd-maintainer@nongnu.org; Tue, 22 Apr 2014 22:14:19 -0400 Received: from medousa.rus.uni-stuttgart.de ([129.69.192.4]:57643) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WcmhO-0007gz-UV for espressomd-maintainer@nongnu.org; Tue, 22 Apr 2014 22:14:11 -0400 Received: from localhost (localhost [127.0.0.1]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP id 995AC37EFC for ; Wed, 23 Apr 2014 04:14:08 +0200 (CEST) X-Virus-Scanned: by amavisd-new at medousa.rus.uni-stuttgart.de Received: from medousa.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (medousa.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id 1GEiiiMs0c84 for ; Wed, 23 Apr 2014 04:14:03 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (imap.icp.uni-stuttgart.de [129.69.120.76]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Wed, 23 Apr 2014 04:14:02 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id E25EEA405E for ; Wed, 23 Apr 2014 04:14:02 +0200 (CEST) Date: Wed, 23 Apr 2014 04:14:02 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <228973116.4.1398219242816.JavaMail.jenkins@elk> In-Reply-To: <174803792.6.1397700850530.JavaMail.jenkins@elk> References: <174803792.6.1397700850530.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: default,nompi X-Jenkins-Result: SUCCESS X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.4 Subject: [Espressomd-maintainer] =?utf-8?q?Jenkins_build_is_back_to_normal?= =?utf-8?q?_=3A_master-nightly-multiconfig_=C2=BB_default=2Cnompi_=2370?= X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Wed, 23 Apr 2014 02:14:26 -0000 See From MAILER-DAEMON Tue Apr 22 22:15:41 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1Wcmir-0001sV-Tr for mharc-espressomd-maintainer@gnu.org; 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Wed, 23 Apr 2014 04:15:17 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (imap.icp.uni-stuttgart.de [129.69.120.76]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Wed, 23 Apr 2014 04:15:17 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id D9FFDA40D2 for ; Wed, 23 Apr 2014 04:15:17 +0200 (CEST) Date: Wed, 23 Apr 2014 04:15:17 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1027241924.5.1398219317877.JavaMail.jenkins@elk> In-Reply-To: <180318426.7.1397700873051.JavaMail.jenkins@elk> References: <180318426.7.1397700873051.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: default,4core X-Jenkins-Result: SUCCESS X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.4 Subject: [Espressomd-maintainer] =?utf-8?q?Jenkins_build_is_back_to_normal?= =?utf-8?q?_=3A_master-nightly-multiconfig_=C2=BB_default=2C4core_=2370?= X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Wed, 23 Apr 2014 02:15:40 -0000 See From MAILER-DAEMON Tue Apr 22 22:15:46 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1Wcmiw-0001tn-2w for mharc-espressomd-maintainer@gnu.org; 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Wed, 23 Apr 2014 04:15:23 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (mailrelay.icp.uni-stuttgart.de [129.69.120.76]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Wed, 23 Apr 2014 04:15:23 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 4E9B2A40D3 for ; Wed, 23 Apr 2014 04:15:23 +0200 (CEST) Date: Wed, 23 Apr 2014 04:15:23 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <734203446.6.1398219323295.JavaMail.jenkins@elk> In-Reply-To: <1535795502.5.1397700848641.JavaMail.jenkins@elk> References: <1535795502.5.1397700848641.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: default,3core X-Jenkins-Result: SUCCESS X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2001:7c0:2041:25::1:3 Subject: [Espressomd-maintainer] =?utf-8?q?Jenkins_build_is_back_to_normal?= =?utf-8?q?_=3A_master-nightly-multiconfig_=C2=BB_default=2C3core_=2370?= X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Wed, 23 Apr 2014 02:15:44 -0000 See From MAILER-DAEMON Wed Apr 23 10:43:32 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WcyOZ-0003ac-UB for mharc-espressomd-maintainer@gnu.org; Wed, 23 Apr 2014 10:43:31 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:46408) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WcyOS-0003aG-Jh for espressomd-maintainer@nongnu.org; Wed, 23 Apr 2014 10:43:30 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WcyOM-0000o3-T7 for espressomd-maintainer@nongnu.org; Wed, 23 Apr 2014 10:43:24 -0400 Received: from medousa-out.rus.uni-stuttgart.de ([2001:7c0:2041:25::1:4]:36179 helo=medousa.rus.uni-stuttgart.de) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WcyOM-0000nP-IX for espressomd-maintainer@nongnu.org; Wed, 23 Apr 2014 10:43:18 -0400 Received: from localhost (localhost [127.0.0.1]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP id E8FA437F07 for ; Wed, 23 Apr 2014 16:43:16 +0200 (CEST) X-Virus-Scanned: by amavisd-new at medousa.rus.uni-stuttgart.de Received: from medousa.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (medousa.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id TC6JtihTdKDb for ; Wed, 23 Apr 2014 16:43:11 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (icp.uni-stuttgart.de [129.69.120.76]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Wed, 23 Apr 2014 16:43:11 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 62F1EA40D3 for ; Wed, 23 Apr 2014 16:43:11 +0200 (CEST) Date: Wed, 23 Apr 2014 16:43:11 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <77763237.7.1398264191381.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-doc X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2001:7c0:2041:25::1:4 Subject: [Espressomd-maintainer] Build failed in Jenkins: master-doc #119 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Wed, 23 Apr 2014 14:43:30 -0000 See Changes: [Axel Arnold] lb no longer touches resort_particles ------------------------------------------ [...truncated 140 lines...] checking for doxygen... /usr/bin/doxygen checking for dot... /usr/bin/dot checking for pdflatex... /usr/bin/pdflatex checking for makeindex... /usr/bin/makeindex checking for bibtex... /usr/bin/bibtex **************************************************************** * Checking for standard headers * **************************************************************** checking for ANSI C header files... (cached) yes checking arpa/inet.h usability... yes checking arpa/inet.h presence... yes checking for arpa/inet.h... yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking float.h usability... yes checking float.h presence... yes checking for float.h... yes checking for inttypes.h... (cached) yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking netdb.h usability... yes checking netdb.h presence... yes checking for netdb.h... yes checking netinet/in.h usability... yes checking netinet/in.h presence... yes checking for netinet/in.h... yes checking stddef.h usability... yes checking stddef.h presence... yes checking for stddef.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for strings.h... (cached) yes checking sys/file.h usability... yes checking sys/file.h presence... yes checking for sys/file.h... yes checking sys/socket.h usability... yes checking sys/socket.h presence... yes checking for sys/socket.h... yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking for unistd.h... (cached) yes **************************************************************** * Checking for standard functions * **************************************************************** checking for stdlib.h... (cached) yes checking for GNU libc compatible malloc... yes checking for working memcmp... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible realloc... yes checking sys/select.h usability... yes checking sys/select.h presence... yes checking for sys/select.h... yes checking for sys/socket.h... (cached) yes checking types of arguments for select... int,fd_set *,struct timeval * checking for size_t... yes checking for working strtod... yes checking for atexit... yes checking for floor... yes checking for getcwd... yes checking for gethostbyname... yes checking for memset... yes checking for pow... yes checking for rint... yes checking for select... yes checking for socket... yes checking for sqrt... yes **************************************************************** * Checking for required tools and libraries * **************************************************************** checking whether to use FFTW... yes checking for library containing fftw_plan_many_dft... -lfftw3 checking fftw3.h usability... yes checking fftw3.h presence... yes checking for fftw3.h... yes checking whether to use CUDA... yes checking for nvcc... /usr/local/cuda/bin/nvcc checking if /usr/local/cuda/bin/nvcc supports -c -o file.o... no checking if /usr/local/cuda/bin/nvcc supports -c -o file.o... (cached) no checking whether the /usr/local/cuda/bin/nvcc linker (/usr/x86_64-suse-linux/bin/ld -m elf_x86_64) supports shared libraries... yes checking how to hardcode library paths into programs... immediate checking for libcudart... yes checking for libcufft... yes checking whether CUDA compiles... yes checking whether CUDA runs... yes **************************************************************** * Checking for Python * **************************************************************** checking for a Python interpreter with version >= 2.5... python checking for python... /usr/local/bin/python checking for python version... 2.7 checking for python platform... linux2 checking for python script directory... ${prefix}/lib/python2.7/site-packages checking for python extension module directory... ${exec_prefix}/lib/python2.7/site-packages checking whether python -B works... yes checking whether to build the python interface... no **************************************************************** * Checking for Tcl/Tk * **************************************************************** checking whether to build the Tcl interface... yes checking for libtcl8.6... no checking for libtcl8.5... yes checking for tcl.h... yes checking whether to use Tk... yes **************************************************************** * Other settings * **************************************************************** checking whether to use efence... no checking whether the variable MYCONFIG is set... no checking the number of available CPUs... 8 **************************************************************** * Creating output files * **************************************************************** checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating config/Makefile config.status: creating config/myconfig-sample-header.hpp config.status: creating src/Makefile config.status: creating src/tcl/Makefile config.status: creating src/python/Makefile config.status: creating tools/Makefile config.status: creating scripts/Makefile config.status: creating testsuite/Makefile config.status: creating doc/Makefile config.status: creating doc/logo/Makefile config.status: creating doc/ug/Makefile config.status: creating doc/dg/Makefile config.status: creating doc/doxygen/Makefile config.status: creating doc/tutorials/Makefile config.status: creating doc/tutorials/01-lennard_jones/Makefile config.status: creating doc/tutorials/02-charged_system/Makefile config.status: creating doc/tutorials/03-object_in_fluid/Makefile config.status: creating doc/latexit.sh config.status: creating testsuite/runtest.sh config.status: creating tools/es_mpiexec config.status: creating src/acconfig.hpp config.status: executing depfiles commands config.status: executing libtool commands config.status: executing myconfig-sample.hpp commands **************************************************************** * Configuration summary * **************************************************************** platform detected = x86_64-unknown-linux-gnu package version = 3.2.0-798-gd19bf34 development sources = yes Compiler -------- compiler = mpic++ linker = /usr/x86_64-suse-linux/bin/ld -m elf_x86_64 c++ compiler flags = -Wall -O5 c++ preprocessor flags = linker flags = -L/usr/local/cuda/lib64 libraries = -ltcl8.5 -lcufft -lcudart -lfftw3 -lm using debug flags = using profiling flags = Libraries --------- FFTW = yes efence = no Cuda ---- CUDA compiler = /usr/local/cuda/bin/nvcc CUDA flags = --ptxas-options=-v -gencode arch=compute_11,code=compute_11 -gencode arch=compute_20,code=compute_20 Tcl/Tk ------ Tcl version = tcl8.5 Tk version = none Python ------ python = /usr/local/bin/python -B build python interface = no Other settings -------------- config = myconfig.hpp installation prefix = /home/jenkins/Espresso number of test tasks = 8 mympiexec = mpiexec = /usr/lib64/mpi/gcc/openmpi/bin/mpiexec pdflatex = /usr/bin/pdflatex makeindex = /usr/bin/makeindex bibtex = /usr/bin/bibtex doxygen = /usr/bin/doxygen dot = /usr/bin/dot Not building Python interface. END CONFIGURE + maintainer/jenkins/doc.sh 31320 (process ID) old priority 0, new priority 5 srcdir= builddir= insource=true START DOC >make doc cd doc; make --print-directory doc make[1]: Entering directory ` cd ug; make --print-directory ug make[2]: Entering directory ` Assembling quickref.inp.. Running LaTeX.. sh ../latexit.sh . ug TEXINPUTS=.:.:: ESPRESSO_VERSION=3.2.0-798-gd19bf34 Running LaTeX stage 1... This is pdfTeX, Version 3.1415926-2.4-1.40.13 (TeX Live 2012/TeX Live for SUSE Linux) restricted \write18 enabled. entering extended mode ERROR: LaTeX stage 1 failed. These are the last 20 lines of ug.log: -------------------------------------------- (./run.tex Chapter 7. Overfull \hbox (0.99998pt too wide) in paragraph at lines 26--30 [] [] [] ! Undefined control sequence. l.47 ...exttt{integrate 1} does the same as \textt {integrate 100}, Here is how much of TeX's memory you used: 17929 strings out of 493607 308544 string characters out of 3149946 414304 words of memory out of 3500000 20591 multiletter control sequences out of 15000+200000 20902 words of font info for 76 fonts, out of 3000000 for 9000 831 hyphenation exceptions out of 8191 75i,16n,80p,504b,860s stack positions out of 5000i,500n,10000p,200000b,50000s ! ==> Fatal error occurred, no output PDF file produced! -------------------------------------------- make[2]: *** [ug.pdf] Error 1 make[2]: Leaving directory ` make[1]: *** [ug] Error 2 make[1]: Leaving directory ` make: *** [doc] Error 2 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE Archiving artifacts From MAILER-DAEMON Wed Apr 23 16:49:38 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1Wd46s-0005z8-Dq for mharc-espressomd-maintainer@gnu.org; Wed, 23 Apr 2014 16:49:38 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:52410) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wd46k-0005EZ-Ig for espressomd-maintainer@nongnu.org; Wed, 23 Apr 2014 16:49:36 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1Wd46e-0001Uj-Qx for espressomd-maintainer@nongnu.org; Wed, 23 Apr 2014 16:49:30 -0400 Received: from hydra-out.rus.uni-stuttgart.de ([2001:7c0:2041:25::1:3]:37636 helo=hydra.rus.uni-stuttgart.de) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wd46e-0001RR-GI for espressomd-maintainer@nongnu.org; Wed, 23 Apr 2014 16:49:24 -0400 Received: from localhost (localhost [127.0.0.1]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP id 0ACCD12C7C9 for ; Wed, 23 Apr 2014 22:49:13 +0200 (CEST) X-Virus-Scanned: by amavisd-new at hydra.rus.uni-stuttgart.de Received: from hydra.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (hydra.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id IJrYoujS4mxV for ; Wed, 23 Apr 2014 22:49:07 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (imap.icp.uni-stuttgart.de [129.69.120.76]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Wed, 23 Apr 2014 22:49:07 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 71AD7A40D3 for ; Wed, 23 Apr 2014 22:49:07 +0200 (CEST) Date: Wed, 23 Apr 2014 22:49:07 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1638021018.8.1398286147433.JavaMail.jenkins@elk> In-Reply-To: <77763237.7.1398264191381.JavaMail.jenkins@elk> References: <77763237.7.1398264191381.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-doc X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2001:7c0:2041:25::1:3 Subject: [Espressomd-maintainer] Build failed in Jenkins: master-doc #120 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Wed, 23 Apr 2014 20:49:36 -0000 See Changes: [Axel Arnold] Fixed explicit template instantation ------------------------------------------ [...truncated 133 lines...] checking for doxygen... /usr/bin/doxygen checking for dot... /usr/bin/dot checking for pdflatex... /usr/bin/pdflatex checking for makeindex... /usr/bin/makeindex checking for bibtex... /usr/bin/bibtex **************************************************************** * Checking for standard headers * **************************************************************** checking for ANSI C header files... (cached) yes checking arpa/inet.h usability... yes checking arpa/inet.h presence... yes checking for arpa/inet.h... yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking float.h usability... yes checking float.h presence... yes checking for float.h... yes checking for inttypes.h... (cached) yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking netdb.h usability... yes checking netdb.h presence... yes checking for netdb.h... yes checking netinet/in.h usability... yes checking netinet/in.h presence... yes checking for netinet/in.h... yes checking stddef.h usability... yes checking stddef.h presence... yes checking for stddef.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for strings.h... (cached) yes checking sys/file.h usability... yes checking sys/file.h presence... yes checking for sys/file.h... yes checking sys/socket.h usability... yes checking sys/socket.h presence... yes checking for sys/socket.h... yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking for unistd.h... (cached) yes **************************************************************** * Checking for standard functions * **************************************************************** checking for stdlib.h... (cached) yes checking for GNU libc compatible malloc... yes checking for working memcmp... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible realloc... yes checking sys/select.h usability... yes checking sys/select.h presence... yes checking for sys/select.h... yes checking for sys/socket.h... (cached) yes checking types of arguments for select... int,fd_set *,struct timeval * checking for size_t... yes checking for working strtod... yes checking for atexit... yes checking for floor... yes checking for getcwd... yes checking for gethostbyname... yes checking for memset... yes checking for pow... yes checking for rint... yes checking for select... yes checking for socket... yes checking for sqrt... yes **************************************************************** * Checking for required tools and libraries * **************************************************************** checking whether to use FFTW... yes checking for library containing fftw_plan_many_dft... -lfftw3 checking fftw3.h usability... yes checking fftw3.h presence... yes checking for fftw3.h... yes checking whether to use CUDA... yes checking for nvcc... /usr/local/cuda/bin/nvcc checking if /usr/local/cuda/bin/nvcc supports -c -o file.o... no checking if /usr/local/cuda/bin/nvcc supports -c -o file.o... (cached) no checking whether the /usr/local/cuda/bin/nvcc linker (/usr/x86_64-suse-linux/bin/ld -m elf_x86_64) supports shared libraries... yes checking how to hardcode library paths into programs... immediate checking for libcudart... yes checking for libcufft... yes checking whether CUDA compiles... yes checking whether CUDA runs... yes **************************************************************** * Checking for Python * **************************************************************** checking for a Python interpreter with version >= 2.5... python checking for python... /usr/local/bin/python checking for python version... 2.7 checking for python platform... linux2 checking for python script directory... ${prefix}/lib/python2.7/site-packages checking for python extension module directory... ${exec_prefix}/lib/python2.7/site-packages checking whether python -B works... yes checking whether to build the python interface... no **************************************************************** * Checking for Tcl/Tk * **************************************************************** checking whether to build the Tcl interface... yes checking for libtcl8.6... no checking for libtcl8.5... yes checking for tcl.h... yes checking whether to use Tk... yes **************************************************************** * Other settings * **************************************************************** checking whether to use efence... no checking whether the variable MYCONFIG is set... no checking the number of available CPUs... 8 **************************************************************** * Creating output files * **************************************************************** checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating config/Makefile config.status: creating config/myconfig-sample-header.hpp config.status: creating src/Makefile config.status: creating src/tcl/Makefile config.status: creating src/python/Makefile config.status: creating tools/Makefile config.status: creating scripts/Makefile config.status: creating testsuite/Makefile config.status: creating doc/Makefile config.status: creating doc/logo/Makefile config.status: creating doc/ug/Makefile config.status: creating doc/dg/Makefile config.status: creating doc/doxygen/Makefile config.status: creating doc/tutorials/Makefile config.status: creating doc/tutorials/01-lennard_jones/Makefile config.status: creating doc/tutorials/02-charged_system/Makefile config.status: creating doc/tutorials/03-object_in_fluid/Makefile config.status: creating doc/latexit.sh config.status: creating testsuite/runtest.sh config.status: creating tools/es_mpiexec config.status: creating src/acconfig.hpp config.status: executing depfiles commands config.status: executing libtool commands config.status: executing myconfig-sample.hpp commands **************************************************************** * Configuration summary * **************************************************************** platform detected = x86_64-unknown-linux-gnu package version = 3.2.0-799-gf35daee development sources = yes Compiler -------- compiler = mpic++ linker = /usr/x86_64-suse-linux/bin/ld -m elf_x86_64 c++ compiler flags = -Wall -O5 c++ preprocessor flags = linker flags = -L/usr/local/cuda/lib64 libraries = -ltcl8.5 -lcufft -lcudart -lfftw3 -lm using debug flags = using profiling flags = Libraries --------- FFTW = yes efence = no Cuda ---- CUDA compiler = /usr/local/cuda/bin/nvcc CUDA flags = --ptxas-options=-v -gencode arch=compute_11,code=compute_11 -gencode arch=compute_20,code=compute_20 Tcl/Tk ------ Tcl version = tcl8.5 Tk version = none Python ------ python = /usr/local/bin/python -B build python interface = no Other settings -------------- config = myconfig.hpp installation prefix = /home/jenkins/Espresso number of test tasks = 8 mympiexec = mpiexec = /usr/lib64/mpi/gcc/openmpi/bin/mpiexec pdflatex = /usr/bin/pdflatex makeindex = /usr/bin/makeindex bibtex = /usr/bin/bibtex doxygen = /usr/bin/doxygen dot = /usr/bin/dot Not building Python interface. END CONFIGURE + maintainer/jenkins/doc.sh 6013 (process ID) old priority 0, new priority 5 srcdir= builddir= insource=true START DOC >make doc cd doc; make --print-directory doc make[1]: Entering directory ` cd ug; make --print-directory ug make[2]: Entering directory ` Assembling quickref.inp.. Running LaTeX.. sh ../latexit.sh . ug TEXINPUTS=.:.:: ESPRESSO_VERSION=3.2.0-799-gf35daee Running LaTeX stage 1... This is pdfTeX, Version 3.1415926-2.4-1.40.13 (TeX Live 2012/TeX Live for SUSE Linux) restricted \write18 enabled. entering extended mode ERROR: LaTeX stage 1 failed. These are the last 20 lines of ug.log: -------------------------------------------- (./run.tex Chapter 7. Overfull \hbox (0.99998pt too wide) in paragraph at lines 26--30 [] [] [] ! Undefined control sequence. l.47 ...exttt{integrate 1} does the same as \textt {integrate 100}, Here is how much of TeX's memory you used: 17929 strings out of 493607 308544 string characters out of 3149946 414304 words of memory out of 3500000 20591 multiletter control sequences out of 15000+200000 20902 words of font info for 76 fonts, out of 3000000 for 9000 831 hyphenation exceptions out of 8191 75i,16n,80p,504b,860s stack positions out of 5000i,500n,10000p,200000b,50000s ! ==> Fatal error occurred, no output PDF file produced! -------------------------------------------- make[2]: *** [ug.pdf] Error 1 make[2]: Leaving directory ` make[1]: *** [ug] Error 2 make[1]: Leaving directory ` make: *** [doc] Error 2 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE Archiving artifacts From MAILER-DAEMON Wed Apr 23 17:02:30 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1Wd4JK-0007JG-MD for mharc-espressomd-maintainer@gnu.org; Wed, 23 Apr 2014 17:02:30 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:55491) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wd4JB-0007Is-J9 for espressomd-maintainer@nongnu.org; Wed, 23 Apr 2014 17:02:28 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1Wd4J4-0005ok-Lk for espressomd-maintainer@nongnu.org; Wed, 23 Apr 2014 17:02:21 -0400 Received: from hydra-out.rus.uni-stuttgart.de ([2001:7c0:2041:25::1:3]:41433 helo=hydra.rus.uni-stuttgart.de) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wd4J4-0005oR-Eo for espressomd-maintainer@nongnu.org; Wed, 23 Apr 2014 17:02:14 -0400 Received: from localhost (localhost [127.0.0.1]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP id C8B4D12C7C9 for ; Wed, 23 Apr 2014 23:02:12 +0200 (CEST) X-Virus-Scanned: by amavisd-new at hydra.rus.uni-stuttgart.de Received: from hydra.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (hydra.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id d4hjpaEbbEVc for ; Wed, 23 Apr 2014 23:02:08 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (imap.icp.uni-stuttgart.de [129.69.120.76]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Wed, 23 Apr 2014 23:02:08 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 5914EA40D3 for ; Wed, 23 Apr 2014 23:02:08 +0200 (CEST) Date: Wed, 23 Apr 2014 23:02:08 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <88970098.9.1398286928346.JavaMail.jenkins@elk> In-Reply-To: <1638021018.8.1398286147433.JavaMail.jenkins@elk> References: <1638021018.8.1398286147433.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-doc X-Jenkins-Result: SUCCESS X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2001:7c0:2041:25::1:3 Subject: [Espressomd-maintainer] Jenkins build is back to normal : master-doc #121 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Wed, 23 Apr 2014 21:02:28 -0000 See From MAILER-DAEMON Wed Apr 23 20:01:20 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1Wd76O-0006Pr-9S for mharc-espressomd-maintainer@gnu.org; Wed, 23 Apr 2014 20:01:20 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:58696) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wd76G-0006PX-4X for espressomd-maintainer@nongnu.org; Wed, 23 Apr 2014 20:01:17 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1Wd769-0007dO-PB for espressomd-maintainer@nongnu.org; Wed, 23 Apr 2014 20:01:11 -0400 Received: from hydra.rus.uni-stuttgart.de ([129.69.192.3]:47476) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wd769-0007dC-Ep for espressomd-maintainer@nongnu.org; Wed, 23 Apr 2014 20:01:05 -0400 Received: from localhost (localhost [127.0.0.1]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP id B702012C7B3 for ; Thu, 24 Apr 2014 02:01:03 +0200 (CEST) X-Virus-Scanned: by amavisd-new at hydra.rus.uni-stuttgart.de Received: from hydra.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (hydra.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id XXbAylR-ES6Z for ; Thu, 24 Apr 2014 02:00:58 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (anoa.ica1.uni-stuttgart.de [129.69.120.76]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Thu, 24 Apr 2014 02:00:58 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 382ABA40D3 for ; Thu, 24 Apr 2014 02:00:58 +0200 (CEST) Date: Thu, 24 Apr 2014 02:00:58 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1056554294.10.1398297658133.JavaMail.jenkins@elk> In-Reply-To: <80346080.3.1398211261753.JavaMail.jenkins@elk> References: <80346080.3.1398211261753.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-nightly-nocuda-nofftw X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.3 Subject: [Espressomd-maintainer] Build failed in Jenkins: master-nightly-nocuda-nofftw #65 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Thu, 24 Apr 2014 00:01:18 -0000 See Changes: [Axel Arnold] Fixed typo ------------------------------------------ [...truncated 126 lines...] checking for mpic++ option to produce PIC... -fPIC -DPIC checking if mpic++ PIC flag -fPIC -DPIC works... yes checking if mpic++ static flag -static works... no checking if mpic++ supports -c -o file.o... yes checking if mpic++ supports -c -o file.o... (cached) yes checking whether the mpic++ linker (/usr/x86_64-suse-linux/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for gawk... (cached) gawk checking for egrep... (cached) /usr/bin/grep -E checking whether ln -s works... yes checking for doxygen... /usr/bin/doxygen checking for dot... /usr/bin/dot checking for pdflatex... /usr/bin/pdflatex checking for makeindex... /usr/bin/makeindex checking for bibtex... /usr/bin/bibtex **************************************************************** * Checking for standard headers * **************************************************************** checking for ANSI C header files... (cached) yes checking arpa/inet.h usability... yes checking arpa/inet.h presence... yes checking for arpa/inet.h... yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking float.h usability... yes checking float.h presence... yes checking for float.h... yes checking for inttypes.h... (cached) yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking netdb.h usability... yes checking netdb.h presence... yes checking for netdb.h... yes checking netinet/in.h usability... yes checking netinet/in.h presence... yes checking for netinet/in.h... yes checking stddef.h usability... yes checking stddef.h presence... yes checking for stddef.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for strings.h... (cached) yes checking sys/file.h usability... yes checking sys/file.h presence... yes checking for sys/file.h... yes checking sys/socket.h usability... yes checking sys/socket.h presence... yes checking for sys/socket.h... yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking for unistd.h... (cached) yes **************************************************************** * Checking for standard functions * **************************************************************** checking for stdlib.h... (cached) yes checking for GNU libc compatible malloc... yes checking for working memcmp... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible realloc... yes checking sys/select.h usability... yes checking sys/select.h presence... yes checking for sys/select.h... yes checking for sys/socket.h... (cached) yes checking types of arguments for select... int,fd_set *,struct timeval * checking for size_t... yes checking for working strtod... yes checking for atexit... yes checking for floor... yes checking for getcwd... yes checking for gethostbyname... yes checking for memset... yes checking for pow... yes checking for rint... yes checking for select... yes checking for socket... yes checking for sqrt... yes **************************************************************** * Checking for required tools and libraries * **************************************************************** checking whether to use FFTW... no checking whether to use CUDA... no checking for nvcc... /bin/false **************************************************************** * Checking for Python * **************************************************************** checking for a Python interpreter with version >= 2.5... python checking for python... /usr/local/bin/python checking for python version... 2.7 checking for python platform... linux2 checking for python script directory... ${prefix}/lib/python2.7/site-packages checking for python extension module directory... ${exec_prefix}/lib/python2.7/site-packages checking whether python -B works... yes checking whether to build the python interface... no **************************************************************** * Checking for Tcl/Tk * **************************************************************** checking whether to build the Tcl interface... yes checking for libtcl8.6... no checking for libtcl8.5... yes checking for tcl.h... yes checking whether to use Tk... yes **************************************************************** * Other settings * **************************************************************** checking whether to use efence... no checking whether the variable MYCONFIG is set... no checking the number of available CPUs... 8 **************************************************************** * Creating output files * **************************************************************** checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating config/Makefile config.status: creating config/myconfig-sample-header.hpp config.status: creating src/Makefile config.status: creating src/tcl/Makefile config.status: creating src/python/Makefile config.status: creating tools/Makefile config.status: creating scripts/Makefile config.status: creating testsuite/Makefile config.status: creating doc/Makefile config.status: creating doc/logo/Makefile config.status: creating doc/ug/Makefile config.status: creating doc/dg/Makefile config.status: creating doc/doxygen/Makefile config.status: creating doc/tutorials/Makefile config.status: creating doc/tutorials/01-lennard_jones/Makefile config.status: creating doc/tutorials/02-charged_system/Makefile config.status: creating doc/tutorials/03-object_in_fluid/Makefile config.status: creating doc/latexit.sh config.status: creating testsuite/runtest.sh config.status: creating tools/es_mpiexec config.status: creating src/acconfig.hpp config.status: executing depfiles commands config.status: executing libtool commands config.status: executing myconfig-sample.hpp commands **************************************************************** * Configuration summary * **************************************************************** platform detected = x86_64-unknown-linux-gnu package version = 3.2.0-800-g025943b development sources = yes Compiler -------- compiler = mpic++ linker = /usr/x86_64-suse-linux/bin/ld -m elf_x86_64 c++ compiler flags = -Wall -O5 c++ preprocessor flags = linker flags = libraries = -ltcl8.5 -lm using debug flags = using profiling flags = Libraries --------- FFTW = no efence = no Tcl/Tk ------ Tcl version = tcl8.5 Tk version = none Python ------ python = /usr/local/bin/python -B build python interface = no Other settings -------------- config = myconfig.hpp installation prefix = /home/jenkins/Espresso number of test tasks = 8 mympiexec = mpiexec = /usr/lib64/mpi/gcc/openmpi/bin/mpiexec pdflatex = /usr/bin/pdflatex makeindex = /usr/bin/makeindex bibtex = /usr/bin/bibtex doxygen = /usr/bin/doxygen dot = /usr/bin/dot CUDA disabled or not supported. Not building Python interface. END CONFIGURE + maintainer/jenkins/build.sh 3436 (process ID) old priority 0, new priority 5 srcdir= builddir= insource=true START BUILD myconfig=maxset build_procs=4 Copying maxset.hpp to >make -j 4 Making all in config make[1]: Entering directory ` make[1]: Nothing to be done for `all'. make[1]: Leaving directory ` Making all in src make[1]: Entering directory ` GEN myconfig-final.hpp <= ../myconfig.hpp GEN config-features.hpp GEN config-features.cpp make all-recursive make[2]: Entering directory ` Making all in . make[3]: Entering directory ` CXX config-features.lo CXX cells.lo CXX communication.lo CXX collision.lo CXX comfixed.lo CXX comforce.lo CXX constraint.lo CXX cuda_interface.lo In file included from communication.cpp:67:0: EspressoSystemInterface.hpp: In member function 'void EspressoSystemInterface::enableParticleCommunication()': EspressoSystemInterface.hpp:116:51: error: 'gpu_get_global_particle_vars_pointer_host' was not declared in this scope EspressoSystemInterface.hpp:119:30: error: 'gpu_init_particle_comm' was not declared in this scope EspressoSystemInterface.hpp:120:37: error: 'cuda_bcast_global_part_params' was not declared in this scope EspressoSystemInterface.hpp: At global scope: EspressoSystemInterface.hpp:156:32: error: cannot declare variable 'espressoSystemInterface' to be of abstract type 'EspressoSystemInterface' In file included from communication.cpp:67:0: EspressoSystemInterface.hpp:10:7: note: because the following virtual functions are pure within 'EspressoSystemInterface': In file included from cuda_interface.hpp:24:0, from communication.cpp:66: SystemInterface.hpp:123:24: note: virtual unsigned int SystemInterface::npart_gpu() CXX debug.lo make[3]: *** [communication.lo] Error 1 make[3]: *** Waiting for unfinished jobs.... make[3]: Leaving directory ` make[2]: *** [all-recursive] Error 1 make[2]: Leaving directory ` make[1]: *** [all] Error 2 make[1]: Leaving directory ` make: *** [all-recursive] Error 1 + exit 1 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE Archiving artifacts From MAILER-DAEMON Wed Apr 23 22:07:24 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1Wd94O-0000Zc-RU for mharc-espressomd-maintainer@gnu.org; Wed, 23 Apr 2014 22:07:24 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:49518) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wd94H-0000ZN-GB for espressomd-maintainer@nongnu.org; Wed, 23 Apr 2014 22:07:23 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1Wd94B-0005iC-FI for espressomd-maintainer@nongnu.org; Wed, 23 Apr 2014 22:07:17 -0400 Received: from charon.rus.uni-stuttgart.de ([129.69.192.1]:59137) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wd94B-0005hW-5d for espressomd-maintainer@nongnu.org; Wed, 23 Apr 2014 22:07:11 -0400 Received: from localhost (localhost [127.0.0.1]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP id 990755FDEA for ; Thu, 24 Apr 2014 04:07:08 +0200 (CEST) X-Virus-Scanned: by amavisd-new at charon.rus.uni-stuttgart.de Received: from charon.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (charon.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id sS1sY1bYA-AO for ; Thu, 24 Apr 2014 04:07:03 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (imap.icp.uni-stuttgart.de [129.69.120.76]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Thu, 24 Apr 2014 04:07:03 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 503F7A40D3 for ; Thu, 24 Apr 2014 04:07:03 +0200 (CEST) Date: Thu, 24 Apr 2014 04:07:03 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <41714381.11.1398305223234.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-nightly-debug X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.1 Subject: [Espressomd-maintainer] Build failed in Jenkins: master-nightly-debug #61 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Thu, 24 Apr 2014 02:07:23 -0000 See Changes: [Axel Arnold] Fixed typo ------------------------------------------ [...truncated 124 lines...] checking if mpic++ supports -c -o file.o... (cached) yes checking whether the mpic++ linker (/usr/x86_64-suse-linux/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for gawk... (cached) gawk checking for egrep... (cached) /usr/bin/grep -E checking whether ln -s works... yes checking for doxygen... /usr/bin/doxygen checking for dot... /usr/bin/dot checking for pdflatex... /usr/bin/pdflatex checking for makeindex... /usr/bin/makeindex checking for bibtex... /usr/bin/bibtex **************************************************************** * Checking for standard headers * **************************************************************** checking for ANSI C header files... (cached) yes checking arpa/inet.h usability... yes checking arpa/inet.h presence... yes checking for arpa/inet.h... yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking float.h usability... yes checking float.h presence... yes checking for float.h... yes checking for inttypes.h... (cached) yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking netdb.h usability... yes checking netdb.h presence... yes checking for netdb.h... yes checking netinet/in.h usability... yes checking netinet/in.h presence... yes checking for netinet/in.h... yes checking stddef.h usability... yes checking stddef.h presence... yes checking for stddef.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for strings.h... (cached) yes checking sys/file.h usability... yes checking sys/file.h presence... yes checking for sys/file.h... yes checking sys/socket.h usability... yes checking sys/socket.h presence... yes checking for sys/socket.h... yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking for unistd.h... (cached) yes **************************************************************** * Checking for standard functions * **************************************************************** checking for stdlib.h... (cached) yes checking for GNU libc compatible malloc... yes checking for working memcmp... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible realloc... yes checking sys/select.h usability... yes checking sys/select.h presence... yes checking for sys/select.h... yes checking for sys/socket.h... (cached) yes checking types of arguments for select... int,fd_set *,struct timeval * checking for size_t... yes checking for working strtod... yes checking for atexit... yes checking for floor... yes checking for getcwd... yes checking for gethostbyname... yes checking for memset... yes checking for pow... yes checking for rint... yes checking for select... yes checking for socket... yes checking for sqrt... yes **************************************************************** * Checking for required tools and libraries * **************************************************************** checking whether to use FFTW... yes checking for library containing fftw_plan_many_dft... -lfftw3 checking fftw3.h usability... yes checking fftw3.h presence... yes checking for fftw3.h... yes checking whether to use CUDA... yes checking for nvcc... /usr/local/cuda/bin/nvcc checking if /usr/local/cuda/bin/nvcc supports -c -o file.o... no checking if /usr/local/cuda/bin/nvcc supports -c -o file.o... (cached) no checking whether the /usr/local/cuda/bin/nvcc linker (/usr/x86_64-suse-linux/bin/ld -m elf_x86_64) supports shared libraries... yes checking how to hardcode library paths into programs... immediate checking for libcudart... yes checking for libcufft... yes checking whether CUDA compiles... yes checking whether CUDA runs... yes **************************************************************** * Checking for Python * **************************************************************** checking for a Python interpreter with version >= 2.5... python checking for python... /usr/local/bin/python checking for python version... 2.7 checking for python platform... linux2 checking for python script directory... ${prefix}/lib/python2.7/site-packages checking for python extension module directory... ${exec_prefix}/lib/python2.7/site-packages checking whether python -B works... yes checking whether to build the python interface... no **************************************************************** * Checking for Tcl/Tk * **************************************************************** checking whether to build the Tcl interface... yes checking for libtcl8.6... no checking for libtcl8.5... yes checking for tcl.h... yes checking whether to use Tk... yes **************************************************************** * Other settings * **************************************************************** checking whether to use efence... no checking whether the variable MYCONFIG is set... no checking the number of available CPUs... 8 **************************************************************** * Creating output files * **************************************************************** checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating config/Makefile config.status: creating config/myconfig-sample-header.hpp config.status: creating src/Makefile config.status: creating src/tcl/Makefile config.status: creating src/python/Makefile config.status: creating tools/Makefile config.status: creating scripts/Makefile config.status: creating testsuite/Makefile config.status: creating doc/Makefile config.status: creating doc/logo/Makefile config.status: creating doc/ug/Makefile config.status: creating doc/dg/Makefile config.status: creating doc/doxygen/Makefile config.status: creating doc/tutorials/Makefile config.status: creating doc/tutorials/01-lennard_jones/Makefile config.status: creating doc/tutorials/02-charged_system/Makefile config.status: creating doc/tutorials/03-object_in_fluid/Makefile config.status: creating doc/latexit.sh config.status: creating testsuite/runtest.sh config.status: creating tools/es_mpiexec config.status: creating src/acconfig.hpp config.status: executing depfiles commands config.status: executing libtool commands config.status: executing myconfig-sample.hpp commands **************************************************************** * Configuration summary * **************************************************************** platform detected = x86_64-unknown-linux-gnu package version = 3.2.0-800-g025943b development sources = yes Compiler -------- compiler = mpic++ linker = /usr/x86_64-suse-linux/bin/ld -m elf_x86_64 c++ compiler flags = -Wall -O5 c++ preprocessor flags = linker flags = -L/usr/local/cuda/lib64 libraries = -ltcl8.5 -lcufft -lcudart -lfftw3 -lm using debug flags = using profiling flags = Libraries --------- FFTW = yes efence = no Cuda ---- CUDA compiler = /usr/local/cuda/bin/nvcc CUDA flags = --ptxas-options=-v -gencode arch=compute_11,code=compute_11 -gencode arch=compute_20,code=compute_20 Tcl/Tk ------ Tcl version = tcl8.5 Tk version = none Python ------ python = /usr/local/bin/python -B build python interface = no Other settings -------------- config = myconfig.hpp installation prefix = /home/jenkins/Espresso number of test tasks = 8 mympiexec = mpiexec = /usr/lib64/mpi/gcc/openmpi/bin/mpiexec pdflatex = /usr/bin/pdflatex makeindex = /usr/bin/makeindex bibtex = /usr/bin/bibtex doxygen = /usr/bin/doxygen dot = /usr/bin/dot Not building Python interface. END CONFIGURE + maintainer/jenkins/build.sh 8696 (process ID) old priority 0, new priority 5 srcdir= builddir= insource=true START BUILD myconfig=nocheck-maxset build_procs=4 Copying nocheck-maxset.hpp to >make -j 4 Making all in config make[1]: Entering directory ` make[1]: Nothing to be done for `all'. make[1]: Leaving directory ` Making all in src make[1]: Entering directory ` GEN config-features.hpp GEN myconfig-final.hpp <= ../myconfig.hpp GEN config-features.cpp make all-recursive make[2]: Entering directory ` Making all in . make[3]: Entering directory ` CXX config-features.lo CXX communication.lo CXX collision.lo CXX cells.lo CXX comfixed.lo CXX comforce.lo CXX constraint.lo CXX cuda_interface.lo communication.cpp: In function 'void mpi_integrate_slave(int, int)': communication.cpp:1202:3: error: 'task' was not declared in this scope CXX debug.lo make[3]: *** [communication.lo] Error 1 make[3]: *** Waiting for unfinished jobs.... make[3]: Leaving directory ` make[2]: *** [all-recursive] Error 1 make[2]: Leaving directory ` make[1]: *** [all] Error 2 make[1]: Leaving directory ` make: *** [all-recursive] Error 1 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE Archiving artifacts From MAILER-DAEMON Thu Apr 24 23:57:44 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WdXGi-0001DY-4C for mharc-espressomd-maintainer@gnu.org; Thu, 24 Apr 2014 23:57:44 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:38124) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WdVY0-0003QW-Vm for espressomd-maintainer@nongnu.org; Thu, 24 Apr 2014 22:07:34 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WdVXu-0006FJ-NH for espressomd-maintainer@nongnu.org; Thu, 24 Apr 2014 22:07:28 -0400 Received: from hydra.rus.uni-stuttgart.de ([129.69.192.3]:45284) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WdVXu-00068x-D1 for espressomd-maintainer@nongnu.org; Thu, 24 Apr 2014 22:07:22 -0400 Received: from localhost (localhost [127.0.0.1]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP id 65DF912C790 for ; Fri, 25 Apr 2014 04:07:11 +0200 (CEST) X-Virus-Scanned: by amavisd-new at hydra.rus.uni-stuttgart.de Received: from hydra.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (hydra.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id DvB9Lc_37xYz for ; Fri, 25 Apr 2014 04:07:06 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (smtp.icp.uni-stuttgart.de [129.69.120.76]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Fri, 25 Apr 2014 04:07:06 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 225ECA40D3 for ; Fri, 25 Apr 2014 04:07:06 +0200 (CEST) Date: Fri, 25 Apr 2014 04:07:06 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1551429659.12.1398391626030.JavaMail.jenkins@elk> In-Reply-To: <41714381.11.1398305223234.JavaMail.jenkins@elk> References: <41714381.11.1398305223234.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-nightly-debug X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.3 Subject: [Espressomd-maintainer] Build failed in Jenkins: master-nightly-debug #62 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Fri, 25 Apr 2014 03:57:42 -0000 See Changes: [Axel Arnold] Workaround for compiling with CUDA/openmpi on MacOSX. ------------------------------------------ [...truncated 124 lines...] checking if mpic++ supports -c -o file.o... (cached) yes checking whether the mpic++ linker (/usr/x86_64-suse-linux/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for gawk... (cached) gawk checking for egrep... (cached) /usr/bin/grep -E checking whether ln -s works... yes checking for doxygen... /usr/bin/doxygen checking for dot... /usr/bin/dot checking for pdflatex... /usr/bin/pdflatex checking for makeindex... /usr/bin/makeindex checking for bibtex... /usr/bin/bibtex **************************************************************** * Checking for standard headers * **************************************************************** checking for ANSI C header files... (cached) yes checking arpa/inet.h usability... yes checking arpa/inet.h presence... yes checking for arpa/inet.h... yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking float.h usability... yes checking float.h presence... yes checking for float.h... yes checking for inttypes.h... (cached) yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking netdb.h usability... yes checking netdb.h presence... yes checking for netdb.h... yes checking netinet/in.h usability... yes checking netinet/in.h presence... yes checking for netinet/in.h... yes checking stddef.h usability... yes checking stddef.h presence... yes checking for stddef.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for strings.h... (cached) yes checking sys/file.h usability... yes checking sys/file.h presence... yes checking for sys/file.h... yes checking sys/socket.h usability... yes checking sys/socket.h presence... yes checking for sys/socket.h... yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking for unistd.h... (cached) yes **************************************************************** * Checking for standard functions * **************************************************************** checking for stdlib.h... (cached) yes checking for GNU libc compatible malloc... yes checking for working memcmp... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible realloc... yes checking sys/select.h usability... yes checking sys/select.h presence... yes checking for sys/select.h... yes checking for sys/socket.h... (cached) yes checking types of arguments for select... int,fd_set *,struct timeval * checking for size_t... yes checking for working strtod... yes checking for atexit... yes checking for floor... yes checking for getcwd... yes checking for gethostbyname... yes checking for memset... yes checking for pow... yes checking for rint... yes checking for select... yes checking for socket... yes checking for sqrt... yes **************************************************************** * Checking for required tools and libraries * **************************************************************** checking whether to use FFTW... yes checking for library containing fftw_plan_many_dft... -lfftw3 checking fftw3.h usability... yes checking fftw3.h presence... yes checking for fftw3.h... yes checking whether to use CUDA... yes checking for nvcc... /usr/local/cuda/bin/nvcc checking if /usr/local/cuda/bin/nvcc supports -c -o file.o... no checking if /usr/local/cuda/bin/nvcc supports -c -o file.o... (cached) no checking whether the /usr/local/cuda/bin/nvcc linker (/usr/x86_64-suse-linux/bin/ld -m elf_x86_64) supports shared libraries... yes checking how to hardcode library paths into programs... immediate checking for libcudart... yes checking for libcufft... yes checking whether CUDA compiles... yes checking whether CUDA runs... yes **************************************************************** * Checking for Python * **************************************************************** checking for a Python interpreter with version >= 2.5... python checking for python... /usr/local/bin/python checking for python version... 2.7 checking for python platform... linux2 checking for python script directory... ${prefix}/lib/python2.7/site-packages checking for python extension module directory... ${exec_prefix}/lib/python2.7/site-packages checking whether python -B works... yes checking whether to build the python interface... no **************************************************************** * Checking for Tcl/Tk * **************************************************************** checking whether to build the Tcl interface... yes checking for libtcl8.6... no checking for libtcl8.5... yes checking for tcl.h... yes checking whether to use Tk... yes **************************************************************** * Other settings * **************************************************************** checking whether to use efence... no checking whether the variable MYCONFIG is set... no checking the number of available CPUs... 8 **************************************************************** * Creating output files * **************************************************************** checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating config/Makefile config.status: creating config/myconfig-sample-header.hpp config.status: creating src/Makefile config.status: creating src/tcl/Makefile config.status: creating src/python/Makefile config.status: creating tools/Makefile config.status: creating scripts/Makefile config.status: creating testsuite/Makefile config.status: creating doc/Makefile config.status: creating doc/logo/Makefile config.status: creating doc/ug/Makefile config.status: creating doc/dg/Makefile config.status: creating doc/doxygen/Makefile config.status: creating doc/tutorials/Makefile config.status: creating doc/tutorials/01-lennard_jones/Makefile config.status: creating doc/tutorials/02-charged_system/Makefile config.status: creating doc/tutorials/03-object_in_fluid/Makefile config.status: creating doc/latexit.sh config.status: creating testsuite/runtest.sh config.status: creating tools/es_mpiexec config.status: creating src/acconfig.hpp config.status: executing depfiles commands config.status: executing libtool commands config.status: executing myconfig-sample.hpp commands **************************************************************** * Configuration summary * **************************************************************** platform detected = x86_64-unknown-linux-gnu package version = 3.2.0-803-gbba3881 development sources = yes Compiler -------- compiler = mpic++ linker = /usr/x86_64-suse-linux/bin/ld -m elf_x86_64 c++ compiler flags = -Wall -O5 c++ preprocessor flags = linker flags = -L/usr/local/cuda/lib64 libraries = -ltcl8.5 -lcufft -lcudart -lfftw3 -lm using debug flags = using profiling flags = Libraries --------- FFTW = yes efence = no Cuda ---- CUDA compiler = /usr/local/cuda/bin/nvcc CUDA flags = --ptxas-options=-v -gencode arch=compute_11,code=compute_11 -gencode arch=compute_20,code=compute_20 Tcl/Tk ------ Tcl version = tcl8.5 Tk version = none Python ------ python = /usr/local/bin/python -B build python interface = no Other settings -------------- config = myconfig.hpp installation prefix = /home/jenkins/Espresso number of test tasks = 8 mympiexec = mpiexec = /usr/lib64/mpi/gcc/openmpi/bin/mpiexec pdflatex = /usr/bin/pdflatex makeindex = /usr/bin/makeindex bibtex = /usr/bin/bibtex doxygen = /usr/bin/doxygen dot = /usr/bin/dot Not building Python interface. END CONFIGURE + maintainer/jenkins/build.sh 2019 (process ID) old priority 0, new priority 5 srcdir= builddir= insource=true START BUILD myconfig=nocheck-maxset build_procs=4 Copying nocheck-maxset.hpp to >make -j 4 Making all in config make[1]: Entering directory ` make[1]: Nothing to be done for `all'. make[1]: Leaving directory ` Making all in src make[1]: Entering directory ` GEN myconfig-final.hpp <= ../myconfig.hpp GEN config-features.hpp GEN config-features.cpp make all-recursive make[2]: Entering directory ` Making all in . make[3]: Entering directory ` CXX config-features.lo CXX cells.lo CXX collision.lo CXX communication.lo CXX comfixed.lo CXX comforce.lo CXX constraint.lo CXX cuda_interface.lo communication.cpp: In function 'void mpi_integrate_slave(int, int)': communication.cpp:1202:3: error: 'task' was not declared in this scope CXX debug.lo make[3]: *** [communication.lo] Error 1 make[3]: *** Waiting for unfinished jobs.... make[3]: Leaving directory ` make[2]: *** [all-recursive] Error 1 make[2]: Leaving directory ` make[1]: *** [all] Error 2 make[1]: Leaving directory ` make: *** [all-recursive] Error 1 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE Archiving artifacts From MAILER-DAEMON Fri Apr 25 20:01:24 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1Wdq3Y-0001Bi-Pc for mharc-espressomd-maintainer@gnu.org; Fri, 25 Apr 2014 20:01:24 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:56651) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wdq3R-00019k-Is for espressomd-maintainer@nongnu.org; Fri, 25 Apr 2014 20:01:23 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1Wdq3L-0006xc-UA for espressomd-maintainer@nongnu.org; Fri, 25 Apr 2014 20:01:17 -0400 Received: from charon.rus.uni-stuttgart.de ([129.69.192.1]:39223) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wdq3L-0006tz-GH for espressomd-maintainer@nongnu.org; Fri, 25 Apr 2014 20:01:11 -0400 Received: from localhost (localhost [127.0.0.1]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP id 7BC545FE22 for ; Sat, 26 Apr 2014 02:01:09 +0200 (CEST) X-Virus-Scanned: by amavisd-new at charon.rus.uni-stuttgart.de Received: from charon.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (charon.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id WeGSIXeoohWd for ; Sat, 26 Apr 2014 02:01:04 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (ica1.uni-stuttgart.de [129.69.120.76]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Sat, 26 Apr 2014 02:01:04 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 35B40A40D3 for ; Sat, 26 Apr 2014 02:01:04 +0200 (CEST) Date: Sat, 26 Apr 2014 02:01:04 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <120403030.13.1398470464198.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-nightly-nocuda-nofftw X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.1 Subject: [Espressomd-maintainer] Build failed in Jenkins: master-nightly-nocuda-nofftw #67 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Sat, 26 Apr 2014 00:01:23 -0000 See Changes: [Axel Arnold] Fixed integrator debug messages ------------------------------------------ [...truncated 127 lines...] checking if mpic++ PIC flag -fPIC -DPIC works... yes checking if mpic++ static flag -static works... no checking if mpic++ supports -c -o file.o... yes checking if mpic++ supports -c -o file.o... (cached) yes checking whether the mpic++ linker (/usr/x86_64-suse-linux/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for gawk... (cached) gawk checking for egrep... (cached) /usr/bin/grep -E checking whether ln -s works... yes checking for doxygen... /usr/bin/doxygen checking for dot... /usr/bin/dot checking for pdflatex... /usr/bin/pdflatex checking for makeindex... /usr/bin/makeindex checking for bibtex... /usr/bin/bibtex **************************************************************** * Checking for standard headers * **************************************************************** checking for ANSI C header files... (cached) yes checking arpa/inet.h usability... yes checking arpa/inet.h presence... yes checking for arpa/inet.h... yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking float.h usability... yes checking float.h presence... yes checking for float.h... yes checking for inttypes.h... (cached) yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking netdb.h usability... yes checking netdb.h presence... yes checking for netdb.h... yes checking netinet/in.h usability... yes checking netinet/in.h presence... yes checking for netinet/in.h... yes checking stddef.h usability... yes checking stddef.h presence... yes checking for stddef.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for strings.h... (cached) yes checking sys/file.h usability... yes checking sys/file.h presence... yes checking for sys/file.h... yes checking sys/socket.h usability... yes checking sys/socket.h presence... yes checking for sys/socket.h... yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking for unistd.h... (cached) yes **************************************************************** * Checking for standard functions * **************************************************************** checking for stdlib.h... (cached) yes checking for GNU libc compatible malloc... yes checking for working memcmp... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible realloc... yes checking sys/select.h usability... yes checking sys/select.h presence... yes checking for sys/select.h... yes checking for sys/socket.h... (cached) yes checking types of arguments for select... int,fd_set *,struct timeval * checking for size_t... yes checking for working strtod... yes checking for atexit... yes checking for floor... yes checking for getcwd... yes checking for gethostbyname... yes checking for memset... yes checking for pow... yes checking for rint... yes checking for select... yes checking for socket... yes checking for sqrt... yes **************************************************************** * Checking for required tools and libraries * **************************************************************** checking whether to use FFTW... no checking whether to use CUDA... no checking for nvcc... /bin/false **************************************************************** * Checking for Python * **************************************************************** checking for a Python interpreter with version >= 2.5... python checking for python... /usr/local/bin/python checking for python version... 2.7 checking for python platform... linux2 checking for python script directory... ${prefix}/lib/python2.7/site-packages checking for python extension module directory... ${exec_prefix}/lib/python2.7/site-packages checking whether python -B works... yes checking whether to build the python interface... no **************************************************************** * Checking for Tcl/Tk * **************************************************************** checking whether to build the Tcl interface... yes checking for libtcl8.6... no checking for libtcl8.5... yes checking for tcl.h... yes checking whether to use Tk... yes **************************************************************** * Other settings * **************************************************************** checking whether to use efence... no checking whether the variable MYCONFIG is set... no checking the number of available CPUs... 8 **************************************************************** * Creating output files * **************************************************************** checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating config/Makefile config.status: creating config/myconfig-sample-header.hpp config.status: creating src/Makefile config.status: creating src/tcl/Makefile config.status: creating src/python/Makefile config.status: creating tools/Makefile config.status: creating scripts/Makefile config.status: creating testsuite/Makefile config.status: creating doc/Makefile config.status: creating doc/logo/Makefile config.status: creating doc/ug/Makefile config.status: creating doc/dg/Makefile config.status: creating doc/doxygen/Makefile config.status: creating doc/tutorials/Makefile config.status: creating doc/tutorials/01-lennard_jones/Makefile config.status: creating doc/tutorials/02-charged_system/Makefile config.status: creating doc/tutorials/03-object_in_fluid/Makefile config.status: creating doc/latexit.sh config.status: creating testsuite/runtest.sh config.status: creating tools/es_mpiexec config.status: creating src/acconfig.hpp config.status: executing depfiles commands config.status: executing libtool commands config.status: executing myconfig-sample.hpp commands **************************************************************** * Configuration summary * **************************************************************** platform detected = x86_64-unknown-linux-gnu package version = 3.2.0-805-g90339c1 development sources = yes Compiler -------- compiler = mpic++ linker = /usr/x86_64-suse-linux/bin/ld -m elf_x86_64 c++ compiler flags = -Wall -O5 c++ preprocessor flags = linker flags = libraries = -ltcl8.5 -lm using debug flags = using profiling flags = Libraries --------- FFTW = no efence = no Tcl/Tk ------ Tcl version = tcl8.5 Tk version = none Python ------ python = /usr/local/bin/python -B build python interface = no Other settings -------------- config = myconfig.hpp installation prefix = /home/jenkins/Espresso number of test tasks = 8 mympiexec = mpiexec = /usr/lib64/mpi/gcc/openmpi/bin/mpiexec pdflatex = /usr/bin/pdflatex makeindex = /usr/bin/makeindex bibtex = /usr/bin/bibtex doxygen = /usr/bin/doxygen dot = /usr/bin/dot CUDA disabled or not supported. Not building Python interface. END CONFIGURE + maintainer/jenkins/build.sh 25110 (process ID) old priority 0, new priority 5 srcdir= builddir= insource=true START BUILD myconfig=maxset build_procs=4 Copying maxset.hpp to >make -j 4 Making all in config make[1]: Entering directory ` make[1]: Nothing to be done for `all'. make[1]: Leaving directory ` Making all in src make[1]: Entering directory ` GEN config-features.hpp GEN myconfig-final.hpp <= ../myconfig.hpp GEN config-features.cpp make all-recursive make[2]: Entering directory ` Making all in . make[3]: Entering directory ` CXX cells.lo CXX collision.lo CXX config-features.lo CXX communication.lo CXX comfixed.lo CXX comforce.lo CXX constraint.lo CXX cuda_interface.lo CXX debug.lo In file included from communication.cpp:67:0: EspressoSystemInterface.hpp: In member function 'void EspressoSystemInterface::enableParticleCommunication()': EspressoSystemInterface.hpp:115:51: error: 'gpu_get_global_particle_vars_pointer_host' was not declared in this scope EspressoSystemInterface.hpp:118:30: error: 'gpu_init_particle_comm' was not declared in this scope EspressoSystemInterface.hpp:119:37: error: 'cuda_bcast_global_part_params' was not declared in this scope EspressoSystemInterface.hpp: At global scope: EspressoSystemInterface.hpp:155:32: error: cannot declare variable 'espressoSystemInterface' to be of abstract type 'EspressoSystemInterface' In file included from communication.cpp:67:0: EspressoSystemInterface.hpp:9:7: note: because the following virtual functions are pure within 'EspressoSystemInterface': In file included from cuda_interface.hpp:24:0, from communication.cpp:66: SystemInterface.hpp:123:24: note: virtual unsigned int SystemInterface::npart_gpu() CXX domain_decomposition.lo make[3]: *** [communication.lo] Error 1 make[3]: *** Waiting for unfinished jobs.... make[3]: Leaving directory ` make[2]: *** [all-recursive] Error 1 make[2]: Leaving directory ` make[1]: *** [all] Error 2 make[1]: Leaving directory ` make: *** [all-recursive] Error 1 + exit 1 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE Archiving artifacts From MAILER-DAEMON Fri Apr 25 22:08:26 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1Wds2U-0005Si-70 for mharc-espressomd-maintainer@gnu.org; Fri, 25 Apr 2014 22:08:26 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:42491) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wds2L-0005NI-Rn for espressomd-maintainer@nongnu.org; Fri, 25 Apr 2014 22:08:24 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1Wds2F-00082Z-1E for espressomd-maintainer@nongnu.org; Fri, 25 Apr 2014 22:08:17 -0400 Received: from hydra.rus.uni-stuttgart.de ([129.69.192.3]:32990) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wds2E-00082F-R1 for espressomd-maintainer@nongnu.org; Fri, 25 Apr 2014 22:08:10 -0400 Received: from localhost (localhost [127.0.0.1]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP id F3E5612C82B for ; Sat, 26 Apr 2014 04:08:02 +0200 (CEST) X-Virus-Scanned: by amavisd-new at hydra.rus.uni-stuttgart.de Received: from hydra.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (hydra.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id bjGktT2vcUYU for ; Sat, 26 Apr 2014 04:07:58 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (anoa.ica1.uni-stuttgart.de [129.69.120.76]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Sat, 26 Apr 2014 04:07:58 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 68038A40D3 for ; Sat, 26 Apr 2014 04:07:58 +0200 (CEST) Date: Sat, 26 Apr 2014 04:07:58 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <675652830.14.1398478078400.JavaMail.jenkins@elk> In-Reply-To: <1551429659.12.1398391626030.JavaMail.jenkins@elk> References: <1551429659.12.1398391626030.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-nightly-debug X-Jenkins-Result: SUCCESS X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.3 Subject: [Espressomd-maintainer] Jenkins build is back to normal : master-nightly-debug #63 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Sat, 26 Apr 2014 02:08:24 -0000 See From MAILER-DAEMON Fri Apr 25 22:19:02 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WdsCk-0007Qk-Jw for mharc-espressomd-maintainer@gnu.org; Fri, 25 Apr 2014 22:19:02 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:43374) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WdsCc-0007Oy-Dg for espressomd-maintainer@nongnu.org; Fri, 25 Apr 2014 22:19:01 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WdsCV-0002BC-Jk for espressomd-maintainer@nongnu.org; Fri, 25 Apr 2014 22:18:54 -0400 Received: from medousa.rus.uni-stuttgart.de ([129.69.192.4]:48826) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WdsCV-0002B8-DS for espressomd-maintainer@nongnu.org; Fri, 25 Apr 2014 22:18:47 -0400 Received: from localhost (localhost [127.0.0.1]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP id 4DF8D37F0E for ; Sat, 26 Apr 2014 04:18:46 +0200 (CEST) X-Virus-Scanned: by amavisd-new at medousa.rus.uni-stuttgart.de Received: from medousa.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (medousa.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id uZ8jytOoXCux for ; 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Mon, 28 Apr 2014 16:02:51 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (smtp.icp.uni-stuttgart.de [129.69.120.76]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Mon, 28 Apr 2014 16:02:51 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 5E083A40D3 for ; Mon, 28 Apr 2014 16:02:51 +0200 (CEST) Date: Mon, 28 Apr 2014 16:02:51 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <301179040.16.1398693771368.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-maintainer-checks X-Jenkins-Result: SUCCESS X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.1 Subject: [Espressomd-maintainer] Jenkins build is back to stable : master-maintainer-checks #64 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Mon, 28 Apr 2014 14:03:18 -0000 See From MAILER-DAEMON Mon Apr 28 11:12:28 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WenEK-0005Xk-8E for mharc-espressomd-maintainer@gnu.org; Mon, 28 Apr 2014 11:12:28 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:58388) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WenED-0005Wy-9C for espressomd-maintainer@nongnu.org; Mon, 28 Apr 2014 11:12:26 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WenE7-0002o4-BH for espressomd-maintainer@nongnu.org; Mon, 28 Apr 2014 11:12:21 -0400 Received: from charon.rus.uni-stuttgart.de ([129.69.192.1]:50795) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WenE7-0002nj-21 for espressomd-maintainer@nongnu.org; Mon, 28 Apr 2014 11:12:15 -0400 Received: from localhost (localhost [127.0.0.1]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP id 6BCD95FE3D for ; Mon, 28 Apr 2014 17:12:13 +0200 (CEST) X-Virus-Scanned: by amavisd-new at charon.rus.uni-stuttgart.de Received: from charon.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (charon.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id ivL0qU85cFbv for ; Mon, 28 Apr 2014 17:12:08 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (imap.icp.uni-stuttgart.de [129.69.120.76]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Mon, 28 Apr 2014 17:12:08 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 32E32A40D3 for ; Mon, 28 Apr 2014 17:12:08 +0200 (CEST) Date: Mon, 28 Apr 2014 17:12:08 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1319296784.17.1398697928182.JavaMail.jenkins@elk> In-Reply-To: <120403030.13.1398470464198.JavaMail.jenkins@elk> References: <120403030.13.1398470464198.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-nightly-nocuda-nofftw X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.1 Subject: [Espressomd-maintainer] Build failed in Jenkins: master-nightly-nocuda-nofftw #68 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Mon, 28 Apr 2014 15:12:27 -0000 See Changes: [Axel Arnold] HARMONICFORCE now part of maxset [Axel Arnold] Bumped compute model to 1.1, fixed compiling w/o cuda ------------------------------------------ [...truncated 171 lines...] checking sys/file.h usability... yes checking sys/file.h presence... yes checking for sys/file.h... yes checking sys/socket.h usability... yes checking sys/socket.h presence... yes checking for sys/socket.h... yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking for unistd.h... (cached) yes **************************************************************** * Checking for standard functions * **************************************************************** checking for stdlib.h... (cached) yes checking for GNU libc compatible malloc... yes checking for working memcmp... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible realloc... yes checking sys/select.h usability... yes checking sys/select.h presence... yes checking for sys/select.h... yes checking for sys/socket.h... (cached) yes checking types of arguments for select... int,fd_set *,struct timeval * checking for size_t... yes checking for working strtod... yes checking for atexit... yes checking for floor... yes checking for getcwd... yes checking for gethostbyname... yes checking for memset... yes checking for pow... yes checking for rint... yes checking for select... yes checking for socket... yes checking for sqrt... yes **************************************************************** * Checking for required tools and libraries * **************************************************************** checking whether to use FFTW... no checking whether to use CUDA... no checking for nvcc... /bin/false **************************************************************** * Checking for Python * **************************************************************** checking for a Python interpreter with version >= 2.5... python checking for python... /usr/local/bin/python checking for python version... 2.7 checking for python platform... linux2 checking for python script directory... ${prefix}/lib/python2.7/site-packages checking for python extension module directory... ${exec_prefix}/lib/python2.7/site-packages checking whether python -B works... yes checking whether to build the python interface... no **************************************************************** * Checking for Tcl/Tk * **************************************************************** checking whether to build the Tcl interface... yes checking for libtcl8.6... no checking for libtcl8.5... yes checking for tcl.h... yes checking whether to use Tk... yes **************************************************************** * Other settings * **************************************************************** checking whether to use efence... no checking whether the variable MYCONFIG is set... no checking the number of available CPUs... 8 **************************************************************** * Creating output files * **************************************************************** checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating config/Makefile config.status: creating config/myconfig-sample-header.hpp config.status: creating src/Makefile config.status: creating src/tcl/Makefile config.status: creating src/python/Makefile config.status: creating tools/Makefile config.status: creating scripts/Makefile config.status: creating testsuite/Makefile config.status: creating doc/Makefile config.status: creating doc/logo/Makefile config.status: creating doc/ug/Makefile config.status: creating doc/dg/Makefile config.status: creating doc/doxygen/Makefile config.status: creating doc/tutorials/Makefile config.status: creating doc/tutorials/01-lennard_jones/Makefile config.status: creating doc/tutorials/02-charged_system/Makefile config.status: creating doc/tutorials/03-object_in_fluid/Makefile config.status: creating doc/latexit.sh config.status: creating testsuite/runtest.sh config.status: creating tools/es_mpiexec config.status: creating src/acconfig.hpp config.status: executing depfiles commands config.status: executing libtool commands config.status: executing myconfig-sample.hpp commands **************************************************************** * Configuration summary * **************************************************************** platform detected = x86_64-unknown-linux-gnu package version = 3.2.0-807-geb12ec3 development sources = yes Compiler -------- compiler = mpic++ linker = /usr/x86_64-suse-linux/bin/ld -m elf_x86_64 c++ compiler flags = -Wall -O5 c++ preprocessor flags = linker flags = libraries = -ltcl8.5 -lm using debug flags = using profiling flags = Libraries --------- FFTW = no efence = no Tcl/Tk ------ Tcl version = tcl8.5 Tk version = none Python ------ python = /usr/local/bin/python -B build python interface = no Other settings -------------- config = myconfig.hpp installation prefix = /home/jenkins/Espresso number of test tasks = 8 mympiexec = mpiexec = /usr/lib64/mpi/gcc/openmpi/bin/mpiexec pdflatex = /usr/bin/pdflatex makeindex = /usr/bin/makeindex bibtex = /usr/bin/bibtex doxygen = /usr/bin/doxygen dot = /usr/bin/dot CUDA disabled or not supported. Not building Python interface. END CONFIGURE + maintainer/jenkins/build.sh 2952 (process ID) old priority 0, new priority 5 srcdir= builddir= insource=true START BUILD myconfig=maxset build_procs=4 Copying maxset.hpp to >make -j 4 Making all in config make[1]: Entering directory ` make[1]: Nothing to be done for `all'. make[1]: Leaving directory ` Making all in src make[1]: Entering directory ` GEN myconfig-final.hpp <= ../myconfig.hpp GEN config-features.hpp GEN config-features.cpp make all-recursive make[2]: Entering directory ` Making all in . make[3]: Entering directory ` CXX config-features.lo CXX collision.lo CXX communication.lo CXX cells.lo CXX comfixed.lo CXX comforce.lo CXX constraint.lo CXX cuda_interface.lo CXX debug.lo CXX domain_decomposition.lo CXX electrokinetics_pdb_parse.lo CXX energy.lo CXX errorhandling.lo CXX fft.lo CXX fft-common.lo CXX fft-dipolar.lo CXX forcecap.lo CXX forces.lo CXX galilei.lo CXX ghosts.lo CXX global.lo CXX grid.lo CXX halo.lo CXX iccp3m.lo CXX imd.lo CXX initialize.lo CXX integrate.lo CXX interaction_data.lo CXX lattice.lo CXX layered.lo CXX lb.lo CXX lb-boundaries.lo CXX lbgpu.lo CXX metadynamics.lo CXX modes.lo CXX molforces.lo CXX mol_cut.lo CXX nemd.lo CXX nsquare.lo CXX particle_data.lo CXX polymer.lo CXX pressure.lo CXX random.lo CXX rattle.lo CXX reaction.lo CXX rotation.lo CXX specfunc.lo CXX statistics.lo CXX statistics_chain.lo CXX statistics_cluster.lo CXX statistics_correlation.lo CXX statistics_fluid.lo CXX statistics_molecule.lo CXX statistics_observable.lo CXX statistics_wallstuff.lo CXX thermostat.lo CXX topology.lo CXX tuning.lo CXX uwerr.lo CXX verlet.lo CXX virtual_sites.lo CXX virtual_sites_com.lo CXX virtual_sites_relative.lo CXX vmdsock.lo CXX ghmc.lo make[3]: *** No rule to make target `HarmonicForce.lo', needed by `libEspresso.la'. Stop. make[3]: *** Waiting for unfinished jobs.... CXX EspressoSystemInterface.lo make[3]: Leaving directory ` make[2]: *** [all-recursive] Error 1 make[2]: Leaving directory ` make[1]: *** [all] Error 2 make[1]: Leaving directory ` make: *** [all-recursive] Error 1 + exit 1 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE Archiving artifacts From MAILER-DAEMON Mon Apr 28 11:27:05 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WenST-00088e-RL for mharc-espressomd-maintainer@gnu.org; Mon, 28 Apr 2014 11:27:05 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:35082) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WenSL-0007r1-Fn for espressomd-maintainer@nongnu.org; Mon, 28 Apr 2014 11:27:04 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WenSE-0000VX-MA for espressomd-maintainer@nongnu.org; Mon, 28 Apr 2014 11:26:57 -0400 Received: from medousa.rus.uni-stuttgart.de ([129.69.192.4]:36698) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WenSE-0000VF-G7 for espressomd-maintainer@nongnu.org; Mon, 28 Apr 2014 11:26:50 -0400 Received: from localhost (localhost [127.0.0.1]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP id 0CA6E37F53 for ; Mon, 28 Apr 2014 17:26:49 +0200 (CEST) X-Virus-Scanned: by amavisd-new at medousa.rus.uni-stuttgart.de Received: from medousa.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (medousa.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id XwyiI71eILYu for ; Mon, 28 Apr 2014 17:26:44 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (mailrelay.icp.uni-stuttgart.de [129.69.120.76]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Mon, 28 Apr 2014 17:26:44 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 982BAA40D3 for ; Mon, 28 Apr 2014 17:26:44 +0200 (CEST) Date: Mon, 28 Apr 2014 17:26:44 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1274612285.18.1398698804550.JavaMail.jenkins@elk> In-Reply-To: <1319296784.17.1398697928182.JavaMail.jenkins@elk> References: <1319296784.17.1398697928182.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-nightly-nocuda-nofftw X-Jenkins-Result: SUCCESS X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.4 Subject: [Espressomd-maintainer] Jenkins build is back to normal : master-nightly-nocuda-nofftw #69 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Mon, 28 Apr 2014 15:27:04 -0000 See From MAILER-DAEMON Wed Apr 30 22:16:32 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WfgY4-0004OV-5K for mharc-espressomd-maintainer@gnu.org; Wed, 30 Apr 2014 22:16:32 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:36983) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WfgXy-0004ON-AQ for espressomd-maintainer@nongnu.org; Wed, 30 Apr 2014 22:16:31 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WfgXs-0006H7-Va for espressomd-maintainer@nongnu.org; Wed, 30 Apr 2014 22:16:26 -0400 Received: from hydra-out.rus.uni-stuttgart.de ([2001:7c0:2041:25::1:3]:59566 helo=hydra.rus.uni-stuttgart.de) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WfgXs-0006G0-LO for espressomd-maintainer@nongnu.org; Wed, 30 Apr 2014 22:16:20 -0400 Received: from localhost (localhost [127.0.0.1]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP id 8A4E912CD61 for ; Thu, 1 May 2014 04:16:12 +0200 (CEST) X-Virus-Scanned: by amavisd-new at hydra.rus.uni-stuttgart.de Received: from hydra.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (hydra.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id xcAIjyPdPpyW for ; Thu, 1 May 2014 04:16:07 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (imap.icp.uni-stuttgart.de [129.69.120.76]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Thu, 1 May 2014 04:16:07 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 19818A40D3 for ; Thu, 1 May 2014 04:16:07 +0200 (CEST) Date: Thu, 1 May 2014 04:16:06 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1479571712.19.1398910567054.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: shanchen,4core X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2001:7c0:2041:25::1:3 Subject: [Espressomd-maintainer] =?utf-8?q?Build_failed_in_Jenkins=3A_mast?= =?utf-8?q?er-nightly-multiconfig_=C2=BB_shanchen=2C4core_=2376?= X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Thu, 01 May 2014 02:16:31 -0000 See Changes: [Marcello Sega] NEWS updated with SHANCHEN feature ------------------------------------------ [...truncated 228 lines...] checking whether python -B works... yes checking whether to build the python interface... no **************************************************************** * Checking for Tcl/Tk * **************************************************************** checking whether to build the Tcl interface... yes checking for libtcl8.6... no checking for libtcl8.5... yes checking for tcl.h... yes checking whether to use Tk... yes **************************************************************** * Other settings * **************************************************************** checking whether to use efence... no checking whether the variable MYCONFIG is set... no checking the number of available CPUs... 8 **************************************************************** * Creating output files * **************************************************************** checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating config/Makefile config.status: creating config/myconfig-sample-header.hpp config.status: creating src/Makefile config.status: creating src/tcl/Makefile config.status: creating src/python/Makefile config.status: creating tools/Makefile config.status: creating scripts/Makefile config.status: creating testsuite/Makefile config.status: creating doc/Makefile config.status: creating doc/logo/Makefile config.status: creating doc/ug/Makefile config.status: creating doc/dg/Makefile config.status: creating doc/doxygen/Makefile config.status: creating doc/tutorials/Makefile config.status: creating doc/tutorials/01-lennard_jones/Makefile config.status: creating doc/tutorials/02-charged_system/Makefile config.status: creating doc/tutorials/03-object_in_fluid/Makefile config.status: creating doc/latexit.sh config.status: creating testsuite/runtest.sh config.status: creating tools/es_mpiexec config.status: creating src/acconfig.hpp config.status: executing depfiles commands config.status: executing libtool commands config.status: executing myconfig-sample.hpp commands **************************************************************** * Configuration summary * **************************************************************** platform detected = x86_64-unknown-linux-gnu package version = 3.2.0-823-g3e339b5 development sources = yes Compiler -------- compiler = mpic++ linker = /usr/x86_64-suse-linux/bin/ld -m elf_x86_64 c++ compiler flags = -Wall -O5 c++ preprocessor flags = linker flags = -L/usr/local/cuda/lib64 libraries = -ltcl8.5 -lcufft -lcudart -lfftw3 -lm using debug flags = using profiling flags = Libraries --------- FFTW = yes efence = no Cuda ---- CUDA compiler = /usr/local/cuda/bin/nvcc CUDA flags = --ptxas-options=-v -gencode arch=compute_20,code=compute_20 Tcl/Tk ------ Tcl version = tcl8.5 Tk version = none Python ------ python = /usr/local/bin/python -B build python interface = no Other settings -------------- config = myconfig.hpp installation prefix = /home/jenkins/Espresso number of test tasks = 8 mympiexec = mpiexec = /usr/lib64/mpi/gcc/openmpi/bin/mpiexec pdflatex = /usr/bin/pdflatex makeindex = /usr/bin/makeindex bibtex = /usr/bin/bibtex doxygen = /usr/bin/doxygen dot = /usr/bin/dot Not building Python interface. END CONFIGURE + maintainer/jenkins/build.sh 26483 (process ID) old priority 0, new priority 5 srcdir= builddir= insource=true parallelism=4core START BUILD myconfig=shanchen build_procs=4 Copying shanchen.hpp to >make -j 4 Making all in config make[1]: Entering directory ` make[1]: Nothing to be done for `all'. make[1]: Leaving directory ` Making all in src make[1]: Entering directory ` GEN config-features.cpp GEN config-features.hpp GEN myconfig-final.hpp <= ../myconfig.hpp make all-recursive make[2]: Entering directory ` Making all in . make[3]: Entering directory ` CXX config-features.lo CXX cells.lo CXX collision.lo CXX communication.lo CXX comfixed.lo CXX comforce.lo CXX constraint.lo CXX cuda_interface.lo CXX debug.lo CXX domain_decomposition.lo CXX electrokinetics_pdb_parse.lo CXX energy.lo CXX errorhandling.lo CXX fft.lo CXX fft-common.lo CXX fft-dipolar.lo CXX forcecap.lo CXX forces.lo CXX galilei.lo CXX ghosts.lo CXX global.lo CXX grid.lo CXX halo.lo CXX iccp3m.lo CXX imd.lo CXX initialize.lo CXX integrate.lo CXX interaction_data.lo CXX lattice.lo CXX layered.lo CXX lb.lo CXX lb-boundaries.lo CXX lbgpu.lo CXX metadynamics.lo CXX modes.lo CXX molforces.lo CXX mol_cut.lo CXX nemd.lo CXX nsquare.lo CXX particle_data.lo CXX polymer.lo CXX pressure.lo CXX random.lo CXX rattle.lo CXX reaction.lo CXX rotation.lo CXX specfunc.lo CXX statistics.lo CXX statistics_chain.lo CXX statistics_cluster.lo CXX statistics_correlation.lo CXX statistics_fluid.lo CXX statistics_molecule.lo CXX statistics_observable.lo CXX statistics_wallstuff.lo CXX thermostat.lo CXX topology.lo CXX tuning.lo CXX uwerr.lo CXX verlet.lo CXX virtual_sites.lo CXX virtual_sites_com.lo CXX virtual_sites_relative.lo CXX vmdsock.lo CXX ghmc.lo CXX EspressoSystemInterface.lo CXX bmhtf-nacl.lo CXX buckingham.lo CXX dpd.lo CXX gaussian.lo CXX gb.lo CXX hat.lo CXX hertzian.lo CXX lj.lo CXX ljangle.lo CXX ljcos2.lo CXX ljcos.lo CXX ljgen.lo CXX morse.lo CXX soft_sphere.lo CXX steppot.lo CXX tab.lo CXX tunable_slip.lo CXX angle.lo CXX angle_harmonic.lo CXX angle_cosine.lo CXX angle_cossquare.lo CXX angledist.lo CXX dihedral.lo CXX endangledist.lo CXX fene.lo CXX harmonic.lo CXX overlap.lo CXX subt_lj.lo CXX debye_hueckel.lo CXX elc.lo CXX magnetic_non_p3m_methods.lo CXX mdlc_correction.lo CXX maggs.lo CXX mmm1d.lo CXX mmm2d.lo CXX mmm-common.lo CXX p3m.lo CXX p3m-common.lo CXX p3m-dipolar.lo CXX reaction_field.lo NVCC cuda_init_cuda.lo NVCC cuda_common_cuda.lo NVCC electrokinetics_cuda.lo NVCC lbgpu_cuda.lo lbgpu_cuda.cu(3362): error: identifier "lb_shanchen_set_boundaries" is undefined 1 error detected in the compilation of "/tmp/tmpxft_00007138_00000000-6_lbgpu_cuda.cpp1.ii". make[3]: *** [lbgpu_cuda.lo] Error 1 make[3]: *** Waiting for unfinished jobs.... make[3]: Leaving directory ` make[2]: *** [all-recursive] Error 1 make[2]: Leaving directory ` make[1]: *** [all] Error 2 make[1]: Leaving directory ` make: *** [all-recursive] Error 1 + exit 1 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE From MAILER-DAEMON Wed Apr 30 22:16:35 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WfgY7-0004Ov-9N for mharc-espressomd-maintainer@gnu.org; Wed, 30 Apr 2014 22:16:35 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:36993) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WfgY0-0004OO-4T for espressomd-maintainer@nongnu.org; Wed, 30 Apr 2014 22:16:33 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WfgXu-0006HF-FV for espressomd-maintainer@nongnu.org; Wed, 30 Apr 2014 22:16:28 -0400 Received: from hydra.rus.uni-stuttgart.de ([129.69.192.3]:52932) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WfgXu-0006GA-53 for espressomd-maintainer@nongnu.org; Wed, 30 Apr 2014 22:16:22 -0400 Received: from localhost (localhost [127.0.0.1]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP id 7C25B12CD68 for ; Thu, 1 May 2014 04:16:14 +0200 (CEST) X-Virus-Scanned: by amavisd-new at hydra.rus.uni-stuttgart.de Received: from hydra.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (hydra.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id FkgdvjC04vCD for ; Thu, 1 May 2014 04:16:09 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (ica1.uni-stuttgart.de [129.69.120.76]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Thu, 1 May 2014 04:16:09 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 3DBBDA40D5 for ; Thu, 1 May 2014 04:16:09 +0200 (CEST) Date: Thu, 1 May 2014 04:16:09 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1899009599.20.1398910569246.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: shanchen,3core X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.3 Subject: [Espressomd-maintainer] =?utf-8?q?Build_failed_in_Jenkins=3A_mast?= =?utf-8?q?er-nightly-multiconfig_=C2=BB_shanchen=2C3core_=2376?= X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Thu, 01 May 2014 02:16:33 -0000 See Changes: [Marcello Sega] NEWS updated with SHANCHEN feature ------------------------------------------ [...truncated 228 lines...] checking whether python -B works... yes checking whether to build the python interface... no **************************************************************** * Checking for Tcl/Tk * **************************************************************** checking whether to build the Tcl interface... yes checking for libtcl8.6... no checking for libtcl8.5... yes checking for tcl.h... yes checking whether to use Tk... yes **************************************************************** * Other settings * **************************************************************** checking whether to use efence... no checking whether the variable MYCONFIG is set... no checking the number of available CPUs... 8 **************************************************************** * Creating output files * **************************************************************** checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating config/Makefile config.status: creating config/myconfig-sample-header.hpp config.status: creating src/Makefile config.status: creating src/tcl/Makefile config.status: creating src/python/Makefile config.status: creating tools/Makefile config.status: creating scripts/Makefile config.status: creating testsuite/Makefile config.status: creating doc/Makefile config.status: creating doc/logo/Makefile config.status: creating doc/ug/Makefile config.status: creating doc/dg/Makefile config.status: creating doc/doxygen/Makefile config.status: creating doc/tutorials/Makefile config.status: creating doc/tutorials/01-lennard_jones/Makefile config.status: creating doc/tutorials/02-charged_system/Makefile config.status: creating doc/tutorials/03-object_in_fluid/Makefile config.status: creating doc/latexit.sh config.status: creating testsuite/runtest.sh config.status: creating tools/es_mpiexec config.status: creating src/acconfig.hpp config.status: executing depfiles commands config.status: executing libtool commands config.status: executing myconfig-sample.hpp commands **************************************************************** * Configuration summary * **************************************************************** platform detected = x86_64-unknown-linux-gnu package version = 3.2.0-823-g3e339b5 development sources = yes Compiler -------- compiler = mpic++ linker = /usr/x86_64-suse-linux/bin/ld -m elf_x86_64 c++ compiler flags = -Wall -O5 c++ preprocessor flags = linker flags = -L/usr/local/cuda/lib64 libraries = -ltcl8.5 -lcufft -lcudart -lfftw3 -lm using debug flags = using profiling flags = Libraries --------- FFTW = yes efence = no Cuda ---- CUDA compiler = /usr/local/cuda/bin/nvcc CUDA flags = --ptxas-options=-v -gencode arch=compute_20,code=compute_20 Tcl/Tk ------ Tcl version = tcl8.5 Tk version = none Python ------ python = /usr/local/bin/python -B build python interface = no Other settings -------------- config = myconfig.hpp installation prefix = /home/jenkins/Espresso number of test tasks = 8 mympiexec = mpiexec = /usr/lib64/mpi/gcc/openmpi/bin/mpiexec pdflatex = /usr/bin/pdflatex makeindex = /usr/bin/makeindex bibtex = /usr/bin/bibtex doxygen = /usr/bin/doxygen dot = /usr/bin/dot Not building Python interface. END CONFIGURE + maintainer/jenkins/build.sh 12450 (process ID) old priority 0, new priority 5 srcdir= builddir= insource=true parallelism=3core START BUILD myconfig=shanchen build_procs=4 Copying shanchen.hpp to >make -j 4 Making all in config make[1]: Entering directory ` make[1]: Nothing to be done for `all'. make[1]: Leaving directory ` Making all in src make[1]: Entering directory ` GEN config-features.hpp GEN myconfig-final.hpp <= ../myconfig.hpp GEN config-features.cpp make all-recursive make[2]: Entering directory ` Making all in . make[3]: Entering directory ` CXX config-features.lo CXX cells.lo CXX collision.lo CXX communication.lo CXX comfixed.lo CXX comforce.lo CXX constraint.lo CXX cuda_interface.lo CXX debug.lo CXX domain_decomposition.lo CXX electrokinetics_pdb_parse.lo CXX energy.lo CXX errorhandling.lo CXX fft.lo CXX fft-common.lo CXX fft-dipolar.lo CXX forcecap.lo CXX forces.lo CXX galilei.lo CXX ghosts.lo CXX global.lo CXX grid.lo CXX halo.lo CXX iccp3m.lo CXX imd.lo CXX initialize.lo CXX integrate.lo CXX interaction_data.lo CXX lattice.lo CXX layered.lo CXX lb.lo CXX lb-boundaries.lo CXX lbgpu.lo CXX metadynamics.lo CXX modes.lo CXX molforces.lo CXX mol_cut.lo CXX nemd.lo CXX nsquare.lo CXX particle_data.lo CXX polymer.lo CXX pressure.lo CXX random.lo CXX rattle.lo CXX reaction.lo CXX rotation.lo CXX specfunc.lo CXX statistics.lo CXX statistics_chain.lo CXX statistics_cluster.lo CXX statistics_correlation.lo CXX statistics_fluid.lo CXX statistics_molecule.lo CXX statistics_observable.lo CXX statistics_wallstuff.lo CXX thermostat.lo CXX topology.lo CXX tuning.lo CXX uwerr.lo CXX verlet.lo CXX virtual_sites.lo CXX virtual_sites_com.lo CXX virtual_sites_relative.lo CXX vmdsock.lo CXX ghmc.lo CXX EspressoSystemInterface.lo CXX bmhtf-nacl.lo CXX buckingham.lo CXX dpd.lo CXX gaussian.lo CXX gb.lo CXX hat.lo CXX hertzian.lo CXX lj.lo CXX ljangle.lo CXX ljcos.lo CXX ljcos2.lo CXX ljgen.lo CXX morse.lo CXX soft_sphere.lo CXX steppot.lo CXX tab.lo CXX tunable_slip.lo CXX angle.lo CXX angle_harmonic.lo CXX angle_cosine.lo CXX angle_cossquare.lo CXX angledist.lo CXX dihedral.lo CXX endangledist.lo CXX fene.lo CXX harmonic.lo CXX overlap.lo CXX subt_lj.lo CXX debye_hueckel.lo CXX elc.lo CXX magnetic_non_p3m_methods.lo CXX mdlc_correction.lo CXX maggs.lo CXX mmm1d.lo CXX mmm2d.lo CXX mmm-common.lo CXX p3m.lo CXX p3m-common.lo CXX p3m-dipolar.lo CXX reaction_field.lo NVCC cuda_init_cuda.lo NVCC cuda_common_cuda.lo NVCC electrokinetics_cuda.lo NVCC lbgpu_cuda.lo lbgpu_cuda.cu(3362): error: identifier "lb_shanchen_set_boundaries" is undefined 1 error detected in the compilation of "/tmp/tmpxft_00003abb_00000000-6_lbgpu_cuda.cpp1.ii". make[3]: *** [lbgpu_cuda.lo] Error 1 make[3]: *** Waiting for unfinished jobs.... make[3]: Leaving directory ` make[2]: *** [all-recursive] Error 1 make[2]: Leaving directory ` make[1]: *** [all] Error 2 make[1]: Leaving directory ` make: *** [all-recursive] Error 1 + exit 1 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE From MAILER-DAEMON Wed Apr 30 22:17:50 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WfgZK-0004Ra-GC for mharc-espressomd-maintainer@gnu.org; Wed, 30 Apr 2014 22:17:50 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:37160) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WfgZE-0004RT-3x for espressomd-maintainer@nongnu.org; Wed, 30 Apr 2014 22:17:49 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WfgZ8-0006hz-FS for espressomd-maintainer@nongnu.org; Wed, 30 Apr 2014 22:17:44 -0400 Received: from medousa.rus.uni-stuttgart.de ([129.69.192.4]:43244) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WfgZ8-0006hu-5G for espressomd-maintainer@nongnu.org; Wed, 30 Apr 2014 22:17:38 -0400 Received: from localhost (localhost [127.0.0.1]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP id 6A90837FBD for ; Thu, 1 May 2014 04:17:37 +0200 (CEST) X-Virus-Scanned: by amavisd-new at medousa.rus.uni-stuttgart.de Received: from medousa.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (medousa.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id dJGBdpgR6Sjq for ; Thu, 1 May 2014 04:17:32 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (icp.uni-stuttgart.de [129.69.120.76]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Thu, 1 May 2014 04:17:32 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 2AB56A40D3 for ; Thu, 1 May 2014 04:17:32 +0200 (CEST) Date: Thu, 1 May 2014 04:17:32 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1095526626.21.1398910652162.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: shanchen,nompi X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.4 Subject: [Espressomd-maintainer] =?utf-8?q?Build_failed_in_Jenkins=3A_mast?= =?utf-8?q?er-nightly-multiconfig_=C2=BB_shanchen=2Cnompi_=2376?= X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Thu, 01 May 2014 02:17:49 -0000 See Changes: [Marcello Sega] NEWS updated with SHANCHEN feature ------------------------------------------ [...truncated 226 lines...] checking whether to build the python interface... no **************************************************************** * Checking for Tcl/Tk * **************************************************************** checking whether to build the Tcl interface... yes checking for libtcl8.6... no checking for libtcl8.5... yes checking for tcl.h... yes checking whether to use Tk... yes **************************************************************** * Other settings * **************************************************************** checking whether to use efence... no checking whether the variable MYCONFIG is set... no checking the number of available CPUs... 8 **************************************************************** * Creating output files * **************************************************************** checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating config/Makefile config.status: creating config/myconfig-sample-header.hpp config.status: creating src/Makefile config.status: creating src/tcl/Makefile config.status: creating src/python/Makefile config.status: creating tools/Makefile config.status: creating scripts/Makefile config.status: creating testsuite/Makefile config.status: creating doc/Makefile config.status: creating doc/logo/Makefile config.status: creating doc/ug/Makefile config.status: creating doc/dg/Makefile config.status: creating doc/doxygen/Makefile config.status: creating doc/tutorials/Makefile config.status: creating doc/tutorials/01-lennard_jones/Makefile config.status: creating doc/tutorials/02-charged_system/Makefile config.status: creating doc/tutorials/03-object_in_fluid/Makefile config.status: creating doc/latexit.sh config.status: creating testsuite/runtest.sh config.status: creating tools/es_mpiexec config.status: creating src/acconfig.hpp config.status: executing depfiles commands config.status: executing libtool commands config.status: executing myconfig-sample.hpp commands **************************************************************** * Configuration summary * **************************************************************** platform detected = x86_64-unknown-linux-gnu package version = 3.2.0-823-g3e339b5 development sources = yes Compiler -------- compiler = g++ linker = /usr/x86_64-suse-linux/bin/ld -m elf_x86_64 c++ compiler flags = -Wall -O5 c++ preprocessor flags = linker flags = -L/usr/local/cuda/lib64 libraries = -ltcl8.5 -lcufft -lcudart -lfftw3 -lm using debug flags = using profiling flags = Libraries --------- FFTW = yes efence = no Cuda ---- CUDA compiler = /usr/local/cuda/bin/nvcc CUDA flags = --ptxas-options=-v -gencode arch=compute_20,code=compute_20 Tcl/Tk ------ Tcl version = tcl8.5 Tk version = none Python ------ python = /usr/local/bin/python -B build python interface = no Other settings -------------- config = myconfig.hpp installation prefix = /home/jenkins/Espresso number of test tasks = 8 mympiexec = mpiexec = pdflatex = /usr/bin/pdflatex makeindex = /usr/bin/makeindex bibtex = /usr/bin/bibtex doxygen = /usr/bin/doxygen dot = /usr/bin/dot WARNING: MPI disabled or not supported! Parallelization turned off. Not building Python interface. END CONFIGURE + maintainer/jenkins/build.sh 13239 (process ID) old priority 0, new priority 5 srcdir= builddir= insource=true parallelism=nompi START BUILD myconfig=shanchen build_procs=4 Copying shanchen.hpp to >make -j 4 Making all in config make[1]: Entering directory ` make[1]: Nothing to be done for `all'. make[1]: Leaving directory ` Making all in src make[1]: Entering directory ` GEN config-features.hpp GEN myconfig-final.hpp <= ../myconfig.hpp GEN config-features.cpp make all-recursive make[2]: Entering directory ` Making all in . make[3]: Entering directory ` CXX config-features.lo CXX cells.lo CXX collision.lo CXX communication.lo CXX comfixed.lo CXX comforce.lo CXX constraint.lo CXX cuda_interface.lo CXX debug.lo CXX domain_decomposition.lo CXX electrokinetics_pdb_parse.lo CXX energy.lo CXX errorhandling.lo CXX fft.lo CXX fft-common.lo CXX fft-dipolar.lo CXX forcecap.lo CXX forces.lo CXX galilei.lo CXX ghosts.lo CXX global.lo CXX grid.lo CXX halo.lo CXX iccp3m.lo CXX imd.lo CXX initialize.lo CXX integrate.lo CXX interaction_data.lo CXX lattice.lo CXX layered.lo CXX lb.lo CXX lb-boundaries.lo CXX lbgpu.lo CXX metadynamics.lo CXX modes.lo CXX molforces.lo CXX mol_cut.lo CXX nemd.lo CXX nsquare.lo CXX particle_data.lo CXX polymer.lo CXX pressure.lo CXX random.lo CXX rattle.lo CXX reaction.lo CXX rotation.lo CXX specfunc.lo CXX statistics.lo CXX statistics_chain.lo CXX statistics_cluster.lo CXX statistics_correlation.lo CXX statistics_fluid.lo CXX statistics_molecule.lo CXX statistics_observable.lo CXX statistics_wallstuff.lo CXX thermostat.lo CXX topology.lo CXX tuning.lo CXX uwerr.lo CXX verlet.lo CXX virtual_sites.lo CXX virtual_sites_com.lo CXX virtual_sites_relative.lo CXX vmdsock.lo CXX ghmc.lo CXX EspressoSystemInterface.lo CXX bmhtf-nacl.lo CXX buckingham.lo CXX dpd.lo CXX gaussian.lo CXX gb.lo CXX hat.lo CXX hertzian.lo CXX lj.lo CXX ljangle.lo CXX ljcos.lo CXX ljcos2.lo CXX ljgen.lo CXX morse.lo CXX soft_sphere.lo CXX steppot.lo CXX tab.lo CXX tunable_slip.lo CXX angle.lo CXX angle_harmonic.lo CXX angle_cosine.lo CXX angle_cossquare.lo CXX angledist.lo CXX dihedral.lo CXX endangledist.lo CXX fene.lo CXX harmonic.lo CXX overlap.lo CXX subt_lj.lo CXX debye_hueckel.lo CXX elc.lo CXX magnetic_non_p3m_methods.lo CXX mdlc_correction.lo CXX maggs.lo CXX mmm1d.lo CXX mmm2d.lo CXX mmm-common.lo CXX p3m.lo CXX p3m-common.lo CXX p3m-dipolar.lo CXX reaction_field.lo NVCC cuda_init_cuda.lo NVCC cuda_common_cuda.lo NVCC electrokinetics_cuda.lo NVCC lbgpu_cuda.lo lbgpu_cuda.cu(3362): error: identifier "lb_shanchen_set_boundaries" is undefined 1 error detected in the compilation of "/tmp/tmpxft_00003cfd_00000000-6_lbgpu_cuda.cpp1.ii". make[3]: *** [lbgpu_cuda.lo] Error 1 make[3]: *** Waiting for unfinished jobs.... make[3]: Leaving directory ` make[2]: *** [all-recursive] Error 1 make[2]: Leaving directory ` make[1]: *** [all] Error 2 make[1]: Leaving directory ` make: *** [all-recursive] Error 1 + exit 1 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE