From MAILER-DAEMON Fri May 02 03:45:21 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1Wg89p-0000pE-6X for mharc-espressomd-maintainer@gnu.org; Fri, 02 May 2014 03:45:21 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:44285) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wg89i-0000om-9A for espressomd-maintainer@nongnu.org; Fri, 02 May 2014 03:45:19 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1Wg89X-0001fZ-Uo for espressomd-maintainer@nongnu.org; Fri, 02 May 2014 03:45:14 -0400 Received: from hydra-out.rus.uni-stuttgart.de ([2001:7c0:2041:25::1:3]:39672 helo=hydra.rus.uni-stuttgart.de) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wg89R-0001Xp-1R for espressomd-maintainer@nongnu.org; Fri, 02 May 2014 03:45:03 -0400 Received: from localhost (localhost [127.0.0.1]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP id 886E812CC22 for ; Fri, 2 May 2014 09:44:48 +0200 (CEST) X-Virus-Scanned: by amavisd-new at hydra.rus.uni-stuttgart.de Received: from hydra.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (hydra.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id Ll4deBF4fy4i for ; Fri, 2 May 2014 09:44:43 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (mailrelay.icp.uni-stuttgart.de [129.69.120.76]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Fri, 2 May 2014 09:44:43 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 344FFA40D3 for ; Fri, 2 May 2014 09:44:43 +0200 (CEST) Date: Fri, 2 May 2014 09:44:43 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1514306886.22.1399016683192.JavaMail.jenkins@elk> In-Reply-To: <1479571712.19.1398910567054.JavaMail.jenkins@elk> References: <1479571712.19.1398910567054.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: shanchen,4core X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2001:7c0:2041:25::1:3 Subject: [Espressomd-maintainer] =?utf-8?q?Build_failed_in_Jenkins=3A_mast?= =?utf-8?q?er-nightly-multiconfig_=C2=BB_shanchen=2C4core_=2377?= X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Fri, 02 May 2014 07:45:19 -0000 See ------------------------------------------ [...truncated 228 lines...] checking whether python -B works... yes checking whether to build the python interface... no **************************************************************** * Checking for Tcl/Tk * **************************************************************** checking whether to build the Tcl interface... yes checking for libtcl8.6... no checking for libtcl8.5... yes checking for tcl.h... yes checking whether to use Tk... yes **************************************************************** * Other settings * **************************************************************** checking whether to use efence... no checking whether the variable MYCONFIG is set... no checking the number of available CPUs... 8 **************************************************************** * Creating output files * **************************************************************** checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating config/Makefile config.status: creating config/myconfig-sample-header.hpp config.status: creating src/Makefile config.status: creating src/tcl/Makefile config.status: creating src/python/Makefile config.status: creating tools/Makefile config.status: creating scripts/Makefile config.status: creating testsuite/Makefile config.status: creating doc/Makefile config.status: creating doc/logo/Makefile config.status: creating doc/ug/Makefile config.status: creating doc/dg/Makefile config.status: creating doc/doxygen/Makefile config.status: creating doc/tutorials/Makefile config.status: creating doc/tutorials/01-lennard_jones/Makefile config.status: creating doc/tutorials/02-charged_system/Makefile config.status: creating doc/tutorials/03-object_in_fluid/Makefile config.status: creating doc/latexit.sh config.status: creating testsuite/runtest.sh config.status: creating tools/es_mpiexec config.status: creating src/acconfig.hpp config.status: executing depfiles commands config.status: executing libtool commands config.status: executing myconfig-sample.hpp commands **************************************************************** * Configuration summary * **************************************************************** platform detected = x86_64-unknown-linux-gnu package version = 3.2.0-823-g3e339b5 development sources = yes Compiler -------- compiler = mpic++ linker = /usr/x86_64-suse-linux/bin/ld -m elf_x86_64 c++ compiler flags = -Wall -O5 c++ preprocessor flags = linker flags = -L/usr/local/cuda/lib64 libraries = -ltcl8.5 -lcufft -lcudart -lfftw3 -lm using debug flags = using profiling flags = Libraries --------- FFTW = yes efence = no Cuda ---- CUDA compiler = /usr/local/cuda/bin/nvcc CUDA flags = --ptxas-options=-v -gencode arch=compute_20,code=compute_20 Tcl/Tk ------ Tcl version = tcl8.5 Tk version = none Python ------ python = /usr/local/bin/python -B build python interface = no Other settings -------------- config = myconfig.hpp installation prefix = /home/jenkins/Espresso number of test tasks = 8 mympiexec = mpiexec = /usr/lib64/mpi/gcc/openmpi/bin/mpiexec pdflatex = /usr/bin/pdflatex makeindex = /usr/bin/makeindex bibtex = /usr/bin/bibtex doxygen = /usr/bin/doxygen dot = /usr/bin/dot Not building Python interface. END CONFIGURE + maintainer/jenkins/build.sh 19824 (process ID) old priority 0, new priority 5 srcdir= builddir= insource=true parallelism=4core START BUILD myconfig=shanchen build_procs=4 Copying shanchen.hpp to >make -j 4 Making all in config make[1]: Entering directory ` make[1]: Nothing to be done for `all'. make[1]: Leaving directory ` Making all in src make[1]: Entering directory ` GEN config-features.cpp GEN myconfig-final.hpp <= ../myconfig.hpp GEN config-features.hpp make all-recursive make[2]: Entering directory ` Making all in . make[3]: Entering directory ` CXX config-features.lo CXX cells.lo CXX collision.lo CXX communication.lo CXX comfixed.lo CXX comforce.lo CXX constraint.lo CXX cuda_interface.lo CXX debug.lo CXX domain_decomposition.lo CXX electrokinetics_pdb_parse.lo CXX energy.lo CXX errorhandling.lo CXX fft.lo CXX fft-common.lo CXX fft-dipolar.lo CXX forcecap.lo CXX forces.lo CXX galilei.lo CXX ghosts.lo CXX global.lo CXX grid.lo CXX halo.lo CXX iccp3m.lo CXX imd.lo CXX initialize.lo CXX integrate.lo CXX interaction_data.lo CXX lattice.lo CXX layered.lo CXX lb.lo CXX lb-boundaries.lo CXX lbgpu.lo CXX metadynamics.lo CXX modes.lo CXX molforces.lo CXX mol_cut.lo CXX nemd.lo CXX nsquare.lo CXX particle_data.lo CXX polymer.lo CXX pressure.lo CXX random.lo CXX rattle.lo CXX reaction.lo CXX rotation.lo CXX specfunc.lo CXX statistics.lo CXX statistics_chain.lo CXX statistics_cluster.lo CXX statistics_correlation.lo CXX statistics_fluid.lo CXX statistics_molecule.lo CXX statistics_wallstuff.lo CXX statistics_observable.lo CXX thermostat.lo CXX topology.lo CXX tuning.lo CXX uwerr.lo CXX verlet.lo CXX virtual_sites.lo CXX virtual_sites_com.lo CXX virtual_sites_relative.lo CXX vmdsock.lo CXX ghmc.lo CXX EspressoSystemInterface.lo CXX bmhtf-nacl.lo CXX buckingham.lo CXX dpd.lo CXX gaussian.lo CXX gb.lo CXX hat.lo CXX hertzian.lo CXX lj.lo CXX ljangle.lo CXX ljcos.lo CXX ljcos2.lo CXX ljgen.lo CXX morse.lo CXX soft_sphere.lo CXX steppot.lo CXX tab.lo CXX tunable_slip.lo CXX angle.lo CXX angle_harmonic.lo CXX angle_cosine.lo CXX angle_cossquare.lo CXX angledist.lo CXX dihedral.lo CXX endangledist.lo CXX fene.lo CXX harmonic.lo CXX overlap.lo CXX subt_lj.lo CXX debye_hueckel.lo CXX elc.lo CXX magnetic_non_p3m_methods.lo CXX mdlc_correction.lo CXX maggs.lo CXX mmm1d.lo CXX mmm2d.lo CXX mmm-common.lo CXX p3m.lo CXX p3m-common.lo CXX p3m-dipolar.lo CXX reaction_field.lo NVCC cuda_init_cuda.lo NVCC cuda_common_cuda.lo NVCC electrokinetics_cuda.lo NVCC lbgpu_cuda.lo lbgpu_cuda.cu(3362): error: identifier "lb_shanchen_set_boundaries" is undefined 1 error detected in the compilation of "/tmp/tmpxft_00005739_00000000-6_lbgpu_cuda.cpp1.ii". make[3]: *** [lbgpu_cuda.lo] Error 1 make[3]: *** Waiting for unfinished jobs.... make[3]: Leaving directory ` make[2]: *** [all-recursive] Error 1 make[2]: Leaving directory ` make[1]: *** [all] Error 2 make[1]: Leaving directory ` make: *** [all-recursive] Error 1 + exit 1 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE From MAILER-DAEMON Fri May 02 03:46:21 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1Wg8An-0000z1-2d for mharc-espressomd-maintainer@gnu.org; Fri, 02 May 2014 03:46:21 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:44432) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wg8Ag-0000y9-CN for espressomd-maintainer@nongnu.org; Fri, 02 May 2014 03:46:19 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1Wg8Aa-0002L2-EM for espressomd-maintainer@nongnu.org; Fri, 02 May 2014 03:46:14 -0400 Received: from charon.rus.uni-stuttgart.de ([129.69.192.1]:46019) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wg8Aa-0002Kw-4A for espressomd-maintainer@nongnu.org; Fri, 02 May 2014 03:46:08 -0400 Received: from localhost (localhost [127.0.0.1]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP id 4529A5FEDF for ; Fri, 2 May 2014 09:46:07 +0200 (CEST) X-Virus-Scanned: by amavisd-new at charon.rus.uni-stuttgart.de Received: from charon.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (charon.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id Ev692hB03W5x for ; Fri, 2 May 2014 09:46:02 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (anoa.ica1.uni-stuttgart.de [129.69.120.76]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Fri, 2 May 2014 09:46:02 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 002DAA40D3 for ; Fri, 2 May 2014 09:46:01 +0200 (CEST) Date: Fri, 2 May 2014 09:46:01 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <892769959.23.1399016761994.JavaMail.jenkins@elk> In-Reply-To: <1095526626.21.1398910652162.JavaMail.jenkins@elk> References: <1095526626.21.1398910652162.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: shanchen,nompi X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.1 Subject: [Espressomd-maintainer] =?utf-8?q?Build_failed_in_Jenkins=3A_mast?= =?utf-8?q?er-nightly-multiconfig_=C2=BB_shanchen=2Cnompi_=2377?= X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Fri, 02 May 2014 07:46:20 -0000 See ------------------------------------------ [...truncated 226 lines...] checking whether to build the python interface... no **************************************************************** * Checking for Tcl/Tk * **************************************************************** checking whether to build the Tcl interface... yes checking for libtcl8.6... no checking for libtcl8.5... yes checking for tcl.h... yes checking whether to use Tk... yes **************************************************************** * Other settings * **************************************************************** checking whether to use efence... no checking whether the variable MYCONFIG is set... no checking the number of available CPUs... 8 **************************************************************** * Creating output files * **************************************************************** checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating config/Makefile config.status: creating config/myconfig-sample-header.hpp config.status: creating src/Makefile config.status: creating src/tcl/Makefile config.status: creating src/python/Makefile config.status: creating tools/Makefile config.status: creating scripts/Makefile config.status: creating testsuite/Makefile config.status: creating doc/Makefile config.status: creating doc/logo/Makefile config.status: creating doc/ug/Makefile config.status: creating doc/dg/Makefile config.status: creating doc/doxygen/Makefile config.status: creating doc/tutorials/Makefile config.status: creating doc/tutorials/01-lennard_jones/Makefile config.status: creating doc/tutorials/02-charged_system/Makefile config.status: creating doc/tutorials/03-object_in_fluid/Makefile config.status: creating doc/latexit.sh config.status: creating testsuite/runtest.sh config.status: creating tools/es_mpiexec config.status: creating src/acconfig.hpp config.status: executing depfiles commands config.status: executing libtool commands config.status: executing myconfig-sample.hpp commands **************************************************************** * Configuration summary * **************************************************************** platform detected = x86_64-unknown-linux-gnu package version = 3.2.0-823-g3e339b5 development sources = yes Compiler -------- compiler = g++ linker = /usr/x86_64-suse-linux/bin/ld -m elf_x86_64 c++ compiler flags = -Wall -O5 c++ preprocessor flags = linker flags = -L/usr/local/cuda/lib64 libraries = -ltcl8.5 -lcufft -lcudart -lfftw3 -lm using debug flags = using profiling flags = Libraries --------- FFTW = yes efence = no Cuda ---- CUDA compiler = /usr/local/cuda/bin/nvcc CUDA flags = --ptxas-options=-v -gencode arch=compute_20,code=compute_20 Tcl/Tk ------ Tcl version = tcl8.5 Tk version = none Python ------ python = /usr/local/bin/python -B build python interface = no Other settings -------------- config = myconfig.hpp installation prefix = /home/jenkins/Espresso number of test tasks = 8 mympiexec = mpiexec = pdflatex = /usr/bin/pdflatex makeindex = /usr/bin/makeindex bibtex = /usr/bin/bibtex doxygen = /usr/bin/doxygen dot = /usr/bin/dot WARNING: MPI disabled or not supported! Parallelization turned off. Not building Python interface. END CONFIGURE + maintainer/jenkins/build.sh 28153 (process ID) old priority 0, new priority 5 srcdir= builddir= insource=true parallelism=nompi START BUILD myconfig=shanchen build_procs=4 Copying shanchen.hpp to >make -j 4 Making all in config make[1]: Entering directory ` make[1]: Nothing to be done for `all'. make[1]: Leaving directory ` Making all in src make[1]: Entering directory ` GEN myconfig-final.hpp <= ../myconfig.hpp GEN config-features.hpp GEN config-features.cpp make all-recursive make[2]: Entering directory ` Making all in . make[3]: Entering directory ` CXX config-features.lo CXX cells.lo CXX collision.lo CXX communication.lo CXX comfixed.lo CXX comforce.lo CXX constraint.lo CXX cuda_interface.lo CXX debug.lo CXX domain_decomposition.lo CXX electrokinetics_pdb_parse.lo CXX energy.lo CXX errorhandling.lo CXX fft.lo CXX fft-common.lo CXX fft-dipolar.lo CXX forcecap.lo CXX forces.lo CXX galilei.lo CXX ghosts.lo CXX global.lo CXX grid.lo CXX halo.lo CXX iccp3m.lo CXX imd.lo CXX initialize.lo CXX integrate.lo CXX interaction_data.lo CXX lattice.lo CXX layered.lo CXX lb.lo CXX lb-boundaries.lo CXX lbgpu.lo CXX metadynamics.lo CXX modes.lo CXX molforces.lo CXX mol_cut.lo CXX nemd.lo CXX nsquare.lo CXX particle_data.lo CXX polymer.lo CXX pressure.lo CXX random.lo CXX rattle.lo CXX reaction.lo CXX rotation.lo CXX specfunc.lo CXX statistics.lo CXX statistics_chain.lo CXX statistics_cluster.lo CXX statistics_correlation.lo CXX statistics_fluid.lo CXX statistics_molecule.lo CXX statistics_observable.lo CXX statistics_wallstuff.lo CXX thermostat.lo CXX topology.lo CXX tuning.lo CXX uwerr.lo CXX verlet.lo CXX virtual_sites.lo CXX virtual_sites_com.lo CXX virtual_sites_relative.lo CXX vmdsock.lo CXX ghmc.lo CXX EspressoSystemInterface.lo CXX bmhtf-nacl.lo CXX buckingham.lo CXX dpd.lo CXX gaussian.lo CXX gb.lo CXX hat.lo CXX hertzian.lo CXX lj.lo CXX ljangle.lo CXX ljcos.lo CXX ljcos2.lo CXX ljgen.lo CXX morse.lo CXX soft_sphere.lo CXX steppot.lo CXX tab.lo CXX tunable_slip.lo CXX angle.lo CXX angle_harmonic.lo CXX angle_cosine.lo CXX angle_cossquare.lo CXX angledist.lo CXX dihedral.lo CXX endangledist.lo CXX fene.lo CXX harmonic.lo CXX overlap.lo CXX subt_lj.lo CXX debye_hueckel.lo CXX elc.lo CXX magnetic_non_p3m_methods.lo CXX mdlc_correction.lo CXX maggs.lo CXX mmm1d.lo CXX mmm2d.lo CXX mmm-common.lo CXX p3m.lo CXX p3m-common.lo CXX p3m-dipolar.lo CXX reaction_field.lo NVCC cuda_init_cuda.lo NVCC cuda_common_cuda.lo NVCC electrokinetics_cuda.lo NVCC lbgpu_cuda.lo lbgpu_cuda.cu(3362): error: identifier "lb_shanchen_set_boundaries" is undefined 1 error detected in the compilation of "/tmp/tmpxft_00007748_00000000-6_lbgpu_cuda.cpp1.ii". make[3]: *** [lbgpu_cuda.lo] Error 1 make[3]: *** Waiting for unfinished jobs.... make[3]: Leaving directory ` make[2]: *** [all-recursive] Error 1 make[2]: Leaving directory ` make[1]: *** [all] Error 2 make[1]: Leaving directory ` make: *** [all-recursive] Error 1 + exit 1 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE From MAILER-DAEMON Fri May 02 03:46:31 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1Wg8Ax-00010S-6V for mharc-espressomd-maintainer@gnu.org; Fri, 02 May 2014 03:46:31 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:44461) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wg8Aq-0000zu-62 for espressomd-maintainer@nongnu.org; Fri, 02 May 2014 03:46:29 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1Wg8Ak-0002Mq-I8 for espressomd-maintainer@nongnu.org; Fri, 02 May 2014 03:46:24 -0400 Received: from charon.rus.uni-stuttgart.de ([129.69.192.1]:46032) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wg8Ak-0002Mj-7o for espressomd-maintainer@nongnu.org; Fri, 02 May 2014 03:46:18 -0400 Received: from localhost (localhost [127.0.0.1]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP id AF9F35FEDF for ; Fri, 2 May 2014 09:46:17 +0200 (CEST) X-Virus-Scanned: by amavisd-new at charon.rus.uni-stuttgart.de Received: from charon.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (charon.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id 9VbpKnemXcPj for ; Fri, 2 May 2014 09:46:12 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (anoa.icp.uni-stuttgart.de [129.69.120.76]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Fri, 2 May 2014 09:46:12 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 7A404A40D3 for ; Fri, 2 May 2014 09:46:12 +0200 (CEST) Date: Fri, 2 May 2014 09:46:12 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <168382138.24.1399016772494.JavaMail.jenkins@elk> In-Reply-To: <1899009599.20.1398910569246.JavaMail.jenkins@elk> References: <1899009599.20.1398910569246.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: shanchen,3core X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.1 Subject: [Espressomd-maintainer] =?utf-8?q?Build_failed_in_Jenkins=3A_mast?= =?utf-8?q?er-nightly-multiconfig_=C2=BB_shanchen=2C3core_=2377?= X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Fri, 02 May 2014 07:46:30 -0000 See ------------------------------------------ [...truncated 228 lines...] checking whether python -B works... yes checking whether to build the python interface... no **************************************************************** * Checking for Tcl/Tk * **************************************************************** checking whether to build the Tcl interface... yes checking for libtcl8.6... no checking for libtcl8.5... yes checking for tcl.h... yes checking whether to use Tk... yes **************************************************************** * Other settings * **************************************************************** checking whether to use efence... no checking whether the variable MYCONFIG is set... no checking the number of available CPUs... 8 **************************************************************** * Creating output files * **************************************************************** checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating config/Makefile config.status: creating config/myconfig-sample-header.hpp config.status: creating src/Makefile config.status: creating src/tcl/Makefile config.status: creating src/python/Makefile config.status: creating tools/Makefile config.status: creating scripts/Makefile config.status: creating testsuite/Makefile config.status: creating doc/Makefile config.status: creating doc/logo/Makefile config.status: creating doc/ug/Makefile config.status: creating doc/dg/Makefile config.status: creating doc/doxygen/Makefile config.status: creating doc/tutorials/Makefile config.status: creating doc/tutorials/01-lennard_jones/Makefile config.status: creating doc/tutorials/02-charged_system/Makefile config.status: creating doc/tutorials/03-object_in_fluid/Makefile config.status: creating doc/latexit.sh config.status: creating testsuite/runtest.sh config.status: creating tools/es_mpiexec config.status: creating src/acconfig.hpp config.status: executing depfiles commands config.status: executing libtool commands config.status: executing myconfig-sample.hpp commands **************************************************************** * Configuration summary * **************************************************************** platform detected = x86_64-unknown-linux-gnu package version = 3.2.0-823-g3e339b5 development sources = yes Compiler -------- compiler = mpic++ linker = /usr/x86_64-suse-linux/bin/ld -m elf_x86_64 c++ compiler flags = -Wall -O5 c++ preprocessor flags = linker flags = -L/usr/local/cuda/lib64 libraries = -ltcl8.5 -lcufft -lcudart -lfftw3 -lm using debug flags = using profiling flags = Libraries --------- FFTW = yes efence = no Cuda ---- CUDA compiler = /usr/local/cuda/bin/nvcc CUDA flags = --ptxas-options=-v -gencode arch=compute_20,code=compute_20 Tcl/Tk ------ Tcl version = tcl8.5 Tk version = none Python ------ python = /usr/local/bin/python -B build python interface = no Other settings -------------- config = myconfig.hpp installation prefix = /home/jenkins/Espresso number of test tasks = 8 mympiexec = mpiexec = /usr/lib64/mpi/gcc/openmpi/bin/mpiexec pdflatex = /usr/bin/pdflatex makeindex = /usr/bin/makeindex bibtex = /usr/bin/bibtex doxygen = /usr/bin/doxygen dot = /usr/bin/dot Not building Python interface. END CONFIGURE + maintainer/jenkins/build.sh 26770 (process ID) old priority 0, new priority 5 srcdir= builddir= insource=true parallelism=3core START BUILD myconfig=shanchen build_procs=4 Copying shanchen.hpp to >make -j 4 Making all in config make[1]: Entering directory ` make[1]: Nothing to be done for `all'. make[1]: Leaving directory ` Making all in src make[1]: Entering directory ` GEN config-features.hpp GEN myconfig-final.hpp <= ../myconfig.hpp GEN config-features.cpp make all-recursive make[2]: Entering directory ` Making all in . make[3]: Entering directory ` CXX config-features.lo CXX cells.lo CXX collision.lo CXX communication.lo CXX comfixed.lo CXX comforce.lo CXX constraint.lo CXX cuda_interface.lo CXX debug.lo CXX domain_decomposition.lo CXX electrokinetics_pdb_parse.lo CXX energy.lo CXX errorhandling.lo CXX fft.lo CXX fft-common.lo CXX fft-dipolar.lo CXX forcecap.lo CXX forces.lo CXX galilei.lo CXX ghosts.lo CXX global.lo CXX grid.lo CXX halo.lo CXX iccp3m.lo CXX imd.lo CXX initialize.lo CXX integrate.lo CXX interaction_data.lo CXX lattice.lo CXX layered.lo CXX lb.lo CXX lb-boundaries.lo CXX lbgpu.lo CXX metadynamics.lo CXX modes.lo CXX molforces.lo CXX mol_cut.lo CXX nemd.lo CXX nsquare.lo CXX particle_data.lo CXX polymer.lo CXX pressure.lo CXX random.lo CXX rattle.lo CXX reaction.lo CXX rotation.lo CXX specfunc.lo CXX statistics.lo CXX statistics_chain.lo CXX statistics_cluster.lo CXX statistics_correlation.lo CXX statistics_fluid.lo CXX statistics_molecule.lo CXX statistics_observable.lo CXX statistics_wallstuff.lo CXX thermostat.lo CXX topology.lo CXX tuning.lo CXX uwerr.lo CXX verlet.lo CXX virtual_sites.lo CXX virtual_sites_com.lo CXX virtual_sites_relative.lo CXX vmdsock.lo CXX ghmc.lo CXX EspressoSystemInterface.lo CXX bmhtf-nacl.lo CXX buckingham.lo CXX dpd.lo CXX gaussian.lo CXX gb.lo CXX hat.lo CXX hertzian.lo CXX lj.lo CXX ljangle.lo CXX ljcos2.lo CXX ljcos.lo CXX ljgen.lo CXX morse.lo CXX soft_sphere.lo CXX steppot.lo CXX tab.lo CXX tunable_slip.lo CXX angle.lo CXX angle_harmonic.lo CXX angle_cosine.lo CXX angle_cossquare.lo CXX angledist.lo CXX dihedral.lo CXX endangledist.lo CXX fene.lo CXX harmonic.lo CXX overlap.lo CXX subt_lj.lo CXX elc.lo CXX debye_hueckel.lo CXX magnetic_non_p3m_methods.lo CXX mdlc_correction.lo CXX maggs.lo CXX mmm1d.lo CXX mmm2d.lo CXX mmm-common.lo CXX p3m.lo CXX p3m-common.lo CXX p3m-dipolar.lo CXX reaction_field.lo NVCC cuda_init_cuda.lo NVCC cuda_common_cuda.lo NVCC electrokinetics_cuda.lo NVCC lbgpu_cuda.lo lbgpu_cuda.cu(3362): error: identifier "lb_shanchen_set_boundaries" is undefined 1 error detected in the compilation of "/tmp/tmpxft_0000732e_00000000-6_lbgpu_cuda.cpp1.ii". make[3]: *** [lbgpu_cuda.lo] Error 1 make[3]: *** Waiting for unfinished jobs.... make[3]: Leaving directory ` make[2]: *** [all-recursive] Error 1 make[2]: Leaving directory ` make[1]: *** [all] Error 2 make[1]: Leaving directory ` make: *** [all-recursive] Error 1 + exit 1 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE From MAILER-DAEMON Fri May 02 08:26:22 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WgCXm-0006Gm-Et for mharc-espressomd-maintainer@gnu.org; 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Fri, 2 May 2014 14:25:54 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (icp.uni-stuttgart.de [129.69.120.76]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Fri, 2 May 2014 14:25:54 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 0B899A40D3 for ; Fri, 2 May 2014 14:25:54 +0200 (CEST) Date: Fri, 2 May 2014 14:25:53 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <27980840.25.1399033553954.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: shanchen,nompi X-Jenkins-Result: SUCCESS X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.1 Subject: [Espressomd-maintainer] =?utf-8?q?Jenkins_build_is_back_to_stable?= =?utf-8?q?_=3A_master-nightly-multiconfig_=C2=BB_shanchen=2Cnompi_=2379?= X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Fri, 02 May 2014 12:26:20 -0000 See From MAILER-DAEMON Fri May 02 08:27:02 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WgCYQ-0006Ib-Jj for mharc-espressomd-maintainer@gnu.org; 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X-Received-From: 2001:7c0:2041:25::1:3 Subject: [Espressomd-maintainer] =?utf-8?q?Jenkins_build_is_back_to_stable?= =?utf-8?q?_=3A_master-nightly-multiconfig_=C2=BB_shanchen=2C4core_=2379?= X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Fri, 02 May 2014 12:27:01 -0000 See From MAILER-DAEMON Fri May 02 08:27:35 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WgCYx-0006KJ-OS for mharc-espressomd-maintainer@gnu.org; Fri, 02 May 2014 08:27:35 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:35167) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WgCYp-0006Jx-SR for espressomd-maintainer@nongnu.org; Fri, 02 May 2014 08:27:34 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WgCYi-0004Hr-Ap for espressomd-maintainer@nongnu.org; Fri, 02 May 2014 08:27:27 -0400 Received: from charon.rus.uni-stuttgart.de ([129.69.192.1]:52337) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WgCYi-0004Hg-4a for espressomd-maintainer@nongnu.org; Fri, 02 May 2014 08:27:20 -0400 Received: from localhost (localhost [127.0.0.1]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP id AB6D35FEF0 for ; Fri, 2 May 2014 14:27:19 +0200 (CEST) X-Virus-Scanned: by amavisd-new at charon.rus.uni-stuttgart.de Received: from charon.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (charon.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id rEwhu5g2TL-l for ; Fri, 2 May 2014 14:27:15 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (anoa.icp.uni-stuttgart.de [129.69.120.76]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Fri, 2 May 2014 14:27:15 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 494E2A40D3 for ; Fri, 2 May 2014 14:27:15 +0200 (CEST) Date: Fri, 2 May 2014 14:27:15 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <812531503.27.1399033635292.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: shanchen,3core X-Jenkins-Result: SUCCESS X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.1 Subject: [Espressomd-maintainer] =?utf-8?q?Jenkins_build_is_back_to_stable?= =?utf-8?q?_=3A_master-nightly-multiconfig_=C2=BB_shanchen=2C3core_=2379?= X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Fri, 02 May 2014 12:27:34 -0000 See From MAILER-DAEMON Wed May 07 04:13:49 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1Whwz7-0000XF-7H for mharc-espressomd-maintainer@gnu.org; Wed, 07 May 2014 04:13:49 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:33049) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Whwz0-0000Wx-SM for espressomd-maintainer@nongnu.org; Wed, 07 May 2014 04:13:47 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1Whwyv-0006Cu-EG for espressomd-maintainer@nongnu.org; Wed, 07 May 2014 04:13:42 -0400 Received: from hydra-out.rus.uni-stuttgart.de ([2001:7c0:2041:25::1:3]:33710 helo=hydra.rus.uni-stuttgart.de) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Whwyv-0006Be-2j for espressomd-maintainer@nongnu.org; Wed, 07 May 2014 04:13:37 -0400 Received: from localhost (localhost [127.0.0.1]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP id AB3EA12C6AE for ; Wed, 7 May 2014 10:13:28 +0200 (CEST) X-Virus-Scanned: by amavisd-new at hydra.rus.uni-stuttgart.de Received: from hydra.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (hydra.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id btoK1m1ZnT7C for ; Wed, 7 May 2014 10:13:23 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (icp.uni-stuttgart.de [129.69.120.76]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Wed, 7 May 2014 10:13:23 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 333BFA40EA for ; Wed, 7 May 2014 10:13:23 +0200 (CEST) Date: Wed, 7 May 2014 10:13:23 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <873482146.1.1399450403201.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-python-interface X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2001:7c0:2041:25::1:3 Subject: [Espressomd-maintainer] Build failed in Jenkins: master-python-interface #101 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Wed, 07 May 2014 08:13:48 -0000 See Changes: [Olaf Lenz] Fixed feature handling for python interface [Olaf Lenz] Some fixes to the docs. ------------------------------------------ [...truncated 304 lines...] config.status: creating doc/latexit.sh config.status: creating testsuite/runtest.sh config.status: creating tools/es_mpiexec config.status: creating src/acconfig.hpp config.status: executing depfiles commands config.status: executing libtool commands config.status: executing myconfig-sample.hpp commands **************************************************************** * Configuration summary * **************************************************************** platform detected = x86_64-unknown-linux-gnu package version = 3.2.0-829-gd1af95b development sources = yes Compiler -------- compiler = mpic++ linker = /usr/x86_64-suse-linux/bin/ld -m elf_x86_64 c++ compiler flags = -Wall -O5 c++ preprocessor flags = linker flags = -L/usr/local/cuda/lib64 libraries = -lcufft -lcudart -lfftw3 -lm using debug flags = using profiling flags = Libraries --------- FFTW = yes efence = no Cuda ---- CUDA compiler = /usr/local/cuda/bin/nvcc CUDA flags = --ptxas-options=-v -gencode arch=compute_20,code=compute_20 Tcl/Tk ------ Tcl version = none Tk version = none Python ------ python = /usr/local/bin/python build python interface = yes preprocessor flags = -I/usr/local/stow/epd-7.3.2/lib/epd-7.3.2/include/python2.7 -I/usr/local/stow/epd-7.3.2/lib/epd-7.3.2/include/python2.7 -fno-strict-aliasing -g -O2 -DNDEBUG -O2 -I/usr/local/stow/epd-7.3.2/lib/epd-7.3.2/lib/python2.7/site-packages/numpy/core/include linker flags = -lpthread -ldl -lutil -lm -lpython2.7 -Xlinker -export-dynamic extra flags = -lpthread -ldl -lutil -lm -lpython2.7 extra linker flags = Other settings -------------- config = myconfig.hpp installation prefix = /home/jenkins/Espresso number of test tasks = 8 mympiexec = mpiexec = /usr/lib64/mpi/gcc/openmpi/bin/mpiexec pdflatex = /usr/bin/pdflatex makeindex = /usr/bin/makeindex bibtex = /usr/bin/bibtex doxygen = /usr/bin/doxygen dot = /usr/bin/dot END CONFIGURE + maintainer/jenkins/build.sh srcdir= builddir= insource=true START BUILD myconfig=default build_procs=1 Using default myconfig. >make -j 1 Making all in config make[1]: Entering directory ` make[1]: Nothing to be done for `all'. make[1]: Leaving directory ` Making all in src make[1]: Entering directory ` GEN myconfig-final.hpp <= ./myconfig-default.hpp GEN config-features.hpp make all-recursive make[2]: Entering directory ` Making all in . make[3]: Entering directory ` CXX config-features.lo CXX cells.lo CXX collision.lo CXX communication.lo CXX comfixed.lo CXX comforce.lo CXX constraint.lo CXX cuda_interface.lo CXX debug.lo CXX domain_decomposition.lo CXX electrokinetics_pdb_parse.lo CXX energy.lo CXX errorhandling.lo CXX fft.lo CXX fft-common.lo CXX fft-dipolar.lo CXX forcecap.lo CXX forces.lo CXX galilei.lo CXX ghosts.lo CXX global.lo CXX grid.lo CXX halo.lo CXX iccp3m.lo CXX imd.lo CXX initialize.lo CXX integrate.lo CXX interaction_data.lo CXX lattice.lo CXX layered.lo CXX lb.lo CXX lb-boundaries.lo CXX lbgpu.lo CXX metadynamics.lo CXX modes.lo CXX molforces.lo CXX mol_cut.lo CXX nemd.lo CXX nsquare.lo CXX particle_data.lo CXX polymer.lo CXX pressure.lo CXX random.lo CXX rattle.lo CXX reaction.lo CXX rotation.lo CXX specfunc.lo CXX statistics.lo CXX statistics_chain.lo CXX statistics_cluster.lo CXX statistics_correlation.lo CXX statistics_fluid.lo CXX statistics_molecule.lo CXX statistics_observable.lo CXX statistics_wallstuff.lo CXX thermostat.lo CXX topology.lo CXX tuning.lo CXX uwerr.lo CXX verlet.lo CXX virtual_sites.lo CXX virtual_sites_com.lo CXX virtual_sites_relative.lo CXX vmdsock.lo CXX ghmc.lo CXX EspressoSystemInterface.lo CXX bmhtf-nacl.lo CXX buckingham.lo CXX dpd.lo CXX gaussian.lo CXX gb.lo CXX hat.lo CXX hertzian.lo CXX lj.lo CXX ljangle.lo CXX ljcos.lo CXX ljcos2.lo CXX ljgen.lo CXX morse.lo CXX soft_sphere.lo CXX steppot.lo CXX tab.lo CXX tunable_slip.lo CXX angle.lo CXX angle_harmonic.lo CXX angle_cosine.lo CXX angle_cossquare.lo CXX angledist.lo CXX dihedral.lo CXX endangledist.lo CXX fene.lo CXX harmonic.lo CXX overlap.lo CXX subt_lj.lo CXX object-in-fluid/area_force_local.lo CXX object-in-fluid/area_force_global.lo CXX object-in-fluid/bending_force.lo CXX object-in-fluid/stretching_force.lo CXX object-in-fluid/stretchlin_force.lo CXX object-in-fluid/volume_force.lo CXX debye_hueckel.lo CXX elc.lo CXX magnetic_non_p3m_methods.lo CXX mdlc_correction.lo CXX maggs.lo CXX mmm1d.lo CXX mmm2d.lo CXX mmm-common.lo CXX p3m.lo CXX p3m-common.lo CXX p3m-dipolar.lo CXX reaction_field.lo NVCC cuda_init_cuda.lo NVCC cuda_common_cuda.lo NVCC electrokinetics_cuda.lo NVCC lbgpu_cuda.lo NVCC p3m_gpu_cuda.lo NVCC EspressoSystemInterface_cuda.lo NVCC HarmonicForce.lo GEN config-version.cpp CXX config-version.lo CXXLD libEspresso.la make[3]: Leaving directory ` Making all in python make[3]: Entering directory ` GEN gen_pxiconfig.cpp Reading definitions from ../../src/features.def... Done. Writing gen_pxiconfig.cpp... Done. CXX gen_pxiconfig.o CXXLD gen_pxiconfig GEN myconfig.pxi make all-am make[4]: Entering directory ` CYTHON espresso.cpp Error compiling Cython file: ------------------------------------------------------------ ... _espressoHandle=EspressoHandle() glob = global_variables.GlobalsHandle() part = particle_data.particleList() #lbfluid=lb.DeviceList() IF CUDA == 1: cu=cuda_init.CudaInitHandle() ^ ------------------------------------------------------------ espresso.pyx:107:16: undeclared name not builtin: cuda_init make[4]: *** [espresso.cpp] Error 1 make[4]: Leaving directory ` make[3]: *** [all] Error 2 make[3]: Leaving directory ` make[2]: *** [all-recursive] Error 1 make[2]: Leaving directory ` make[1]: *** [all] Error 2 make[1]: Leaving directory ` make: *** [all-recursive] Error 1 + exit 1 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE Archiving artifacts From MAILER-DAEMON Wed May 07 04:14:31 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1Whwzn-0000tv-RR for mharc-espressomd-maintainer@gnu.org; Wed, 07 May 2014 04:14:31 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:33451) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Whwzg-0000sy-LO for espressomd-maintainer@nongnu.org; Wed, 07 May 2014 04:14:30 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1Whwza-0006Mx-Rm for espressomd-maintainer@nongnu.org; Wed, 07 May 2014 04:14:24 -0400 Received: from charon.rus.uni-stuttgart.de ([129.69.192.1]:53373) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Whwza-0006Mk-Gt for espressomd-maintainer@nongnu.org; Wed, 07 May 2014 04:14:18 -0400 Received: from localhost (localhost [127.0.0.1]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP id E16305FDDF for ; Wed, 7 May 2014 10:14:16 +0200 (CEST) X-Virus-Scanned: by amavisd-new at charon.rus.uni-stuttgart.de Received: from charon.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (charon.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id ziLsdCCGL0CK for ; Wed, 7 May 2014 10:14:11 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (icp.uni-stuttgart.de [129.69.120.76]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Wed, 7 May 2014 10:14:11 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 234ACA40EA for ; Wed, 7 May 2014 10:14:11 +0200 (CEST) Date: Wed, 7 May 2014 10:14:11 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <691190619.2.1399450451140.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-dist X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.1 Subject: [Espressomd-maintainer] Build failed in Jenkins: master-dist #121 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Wed, 07 May 2014 08:14:30 -0000 See Changes: [Olaf Lenz] Fixed feature handling for python interface [Olaf Lenz] Some fixes to the docs. ------------------------------------------ [...truncated 121 lines...] checking for ld used by mpic++... /usr/x86_64-suse-linux/bin/ld -m elf_x86_64 checking if the linker (/usr/x86_64-suse-linux/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the mpic++ linker (/usr/x86_64-suse-linux/bin/ld -m elf_x86_64) supports shared libraries... yes checking for mpic++ option to produce PIC... -fPIC -DPIC checking if mpic++ PIC flag -fPIC -DPIC works... yes checking if mpic++ static flag -static works... no checking if mpic++ supports -c -o file.o... yes checking if mpic++ supports -c -o file.o... (cached) yes checking whether the mpic++ linker (/usr/x86_64-suse-linux/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for gawk... (cached) gawk checking for egrep... (cached) /usr/bin/grep -E checking whether ln -s works... yes checking for doxygen... /usr/bin/doxygen checking for dot... /usr/bin/dot checking for pdflatex... /usr/bin/pdflatex checking for makeindex... /usr/bin/makeindex checking for bibtex... /usr/bin/bibtex **************************************************************** * Checking for standard headers * **************************************************************** checking for ANSI C header files... (cached) yes checking arpa/inet.h usability... yes checking arpa/inet.h presence... yes checking for arpa/inet.h... yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking float.h usability... yes checking float.h presence... yes checking for float.h... yes checking for inttypes.h... (cached) yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking netdb.h usability... yes checking netdb.h presence... yes checking for netdb.h... yes checking netinet/in.h usability... yes checking netinet/in.h presence... yes checking for netinet/in.h... yes checking stddef.h usability... yes checking stddef.h presence... yes checking for stddef.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for strings.h... (cached) yes checking sys/file.h usability... yes checking sys/file.h presence... yes checking for sys/file.h... yes checking sys/socket.h usability... yes checking sys/socket.h presence... yes checking for sys/socket.h... yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking for unistd.h... (cached) yes **************************************************************** * Checking for standard functions * **************************************************************** checking for stdlib.h... (cached) yes checking for GNU libc compatible malloc... yes checking for working memcmp... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible realloc... yes checking sys/select.h usability... yes checking sys/select.h presence... yes checking for sys/select.h... yes checking for sys/socket.h... (cached) yes checking types of arguments for select... int,fd_set *,struct timeval * checking for size_t... yes checking for working strtod... yes checking for atexit... yes checking for floor... yes checking for getcwd... yes checking for gethostbyname... yes checking for memset... yes checking for pow... yes checking for rint... yes checking for select... yes checking for socket... yes checking for sqrt... yes **************************************************************** * Checking for required tools and libraries * **************************************************************** checking whether to use FFTW... yes checking for library containing fftw_plan_many_dft... -lfftw3 checking fftw3.h usability... yes checking fftw3.h presence... yes checking for fftw3.h... yes checking whether to use CUDA... yes checking for nvcc... /usr/local/cuda/bin/nvcc checking if /usr/local/cuda/bin/nvcc supports -c -o file.o... no checking if /usr/local/cuda/bin/nvcc supports -c -o file.o... (cached) no checking whether the /usr/local/cuda/bin/nvcc linker (/usr/x86_64-suse-linux/bin/ld -m elf_x86_64) supports shared libraries... yes checking how to hardcode library paths into programs... immediate checking for libcudart... yes checking for libcufft... yes checking whether CUDA compiles... yes checking whether CUDA runs... yes **************************************************************** * Checking for Python * **************************************************************** checking for a Python interpreter with version >= 2.5... python checking for python... /usr/local/bin/python checking for python version... 2.7 checking for python platform... linux2 checking for python script directory... ${prefix}/lib/python2.7/site-packages checking for python extension module directory... ${exec_prefix}/lib/python2.7/site-packages checking whether python -B works... yes checking whether to build the python interface... no **************************************************************** * Checking for Tcl/Tk * **************************************************************** checking whether to build the Tcl interface... yes checking for libtcl8.6... no checking for libtcl8.5... yes checking for tcl.h... yes checking whether to use Tk... yes **************************************************************** * Other settings * **************************************************************** checking whether to use efence... no checking whether the variable MYCONFIG is set... no checking the number of available CPUs... 8 **************************************************************** * Creating output files * **************************************************************** checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating config/Makefile config.status: creating config/myconfig-sample-header.hpp config.status: creating src/Makefile config.status: creating src/tcl/Makefile config.status: creating src/python/Makefile config.status: creating tools/Makefile config.status: creating scripts/Makefile config.status: creating testsuite/Makefile config.status: creating doc/Makefile config.status: creating doc/logo/Makefile config.status: creating doc/ug/Makefile config.status: creating doc/dg/Makefile config.status: creating doc/doxygen/Makefile config.status: creating doc/tutorials/Makefile config.status: creating doc/tutorials/01-lennard_jones/Makefile config.status: creating doc/tutorials/02-charged_system/Makefile config.status: creating doc/tutorials/03-object_in_fluid/Makefile config.status: creating doc/latexit.sh config.status: creating testsuite/runtest.sh config.status: creating tools/es_mpiexec config.status: creating src/acconfig.hpp config.status: executing depfiles commands config.status: executing libtool commands config.status: executing myconfig-sample.hpp commands **************************************************************** * Configuration summary * **************************************************************** platform detected = x86_64-unknown-linux-gnu package version = 3.2.0-829-gd1af95b development sources = yes Compiler -------- compiler = mpic++ linker = /usr/x86_64-suse-linux/bin/ld -m elf_x86_64 c++ compiler flags = -Wall -O5 c++ preprocessor flags = linker flags = -L/usr/local/cuda/lib64 libraries = -ltcl8.5 -lcufft -lcudart -lfftw3 -lm using debug flags = using profiling flags = Libraries --------- FFTW = yes efence = no Cuda ---- CUDA compiler = /usr/local/cuda/bin/nvcc CUDA flags = --ptxas-options=-v -gencode arch=compute_20,code=compute_20 Tcl/Tk ------ Tcl version = tcl8.5 Tk version = none Python ------ python = /usr/local/bin/python -B build python interface = no Other settings -------------- config = myconfig.hpp installation prefix = /home/jenkins/Espresso number of test tasks = 8 mympiexec = mpiexec = /usr/lib64/mpi/gcc/openmpi/bin/mpiexec pdflatex = /usr/bin/pdflatex makeindex = /usr/bin/makeindex bibtex = /usr/bin/bibtex doxygen = /usr/bin/doxygen dot = /usr/bin/dot Not building Python interface. END CONFIGURE + maintainer/jenkins/dist.sh 27591 (process ID) old priority 0, new priority 5 srcdir= builddir= insource=true START DIST >make dist dist-xz make dist-xz dist-gzip am__post_remove_distdir='@:' make[1]: Entering directory ` cd .; sh config/genversion.sh -rd > if test -d "espresso-3.2.0-829-gd1af95b"; then find "espresso-3.2.0-829-gd1af95b" -type d ! -perm -200 -exec chmod u+w {} ';' && rm -rf "espresso-3.2.0-829-gd1af95b" || { sleep 5 && rm -rf "espresso-3.2.0-829-gd1af95b"; }; else :; fi test -d "espresso-3.2.0-829-gd1af95b" || mkdir "espresso-3.2.0-829-gd1af95b" (cd config && make top_distdir=../espresso-3.2.0-829-gd1af95b distdir=../espresso-3.2.0-829-gd1af95b/config \ am__remove_distdir=: am__skip_length_check=: am__skip_mode_fix=: distdir) make[2]: Entering directory ` make[2]: Leaving directory ` (cd src && make top_distdir=../espresso-3.2.0-829-gd1af95b distdir=../espresso-3.2.0-829-gd1af95b/src \ am__remove_distdir=: am__skip_length_check=: am__skip_mode_fix=: distdir) make[2]: Entering directory ` GEN config-features.cpp GEN config-version.cpp (cd tcl && make top_distdir=../../espresso-3.2.0-829-gd1af95b distdir=../../espresso-3.2.0-829-gd1af95b/src/tcl \ am__remove_distdir=: am__skip_length_check=: am__skip_mode_fix=: distdir) make[3]: Entering directory ` make[3]: Leaving directory ` (cd python && make top_distdir=../../espresso-3.2.0-829-gd1af95b distdir=../../espresso-3.2.0-829-gd1af95b/src/python \ am__remove_distdir=: am__skip_length_check=: am__skip_mode_fix=: distdir) make[3]: Entering directory ` make[3]: *** No rule to make target `gen_pxiconfig.pyx', needed by `distdir'. Stop. make[3]: Leaving directory ` make[2]: *** [distdir] Error 1 make[2]: Leaving directory ` make[1]: *** [distdir] Error 1 make[1]: Leaving directory ` make: *** [dist] Error 2 + exit 1 Build step 'Execute shell' marked build as failure Archiving artifacts From MAILER-DAEMON Wed May 07 05:37:25 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WhyI1-0008AZ-P8 for mharc-espressomd-maintainer@gnu.org; Wed, 07 May 2014 05:37:25 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:35826) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WhyHt-0007zr-DW for espressomd-maintainer@nongnu.org; Wed, 07 May 2014 05:37:24 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WhyHk-0004Te-Ca for espressomd-maintainer@nongnu.org; Wed, 07 May 2014 05:37:17 -0400 Received: from medousa.rus.uni-stuttgart.de ([129.69.192.4]:46672) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WhyHk-0004TC-5j for espressomd-maintainer@nongnu.org; Wed, 07 May 2014 05:37:08 -0400 Received: from localhost (localhost [127.0.0.1]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP id B37D137EF5 for ; Wed, 7 May 2014 11:37:06 +0200 (CEST) X-Virus-Scanned: by amavisd-new at medousa.rus.uni-stuttgart.de Received: from medousa.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (medousa.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id BrG2tjri-lGG for ; Wed, 7 May 2014 11:37:02 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (imap.icp.uni-stuttgart.de [129.69.120.76]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Wed, 7 May 2014 11:37:02 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 47DEDA40EC for ; Wed, 7 May 2014 11:37:02 +0200 (CEST) Date: Wed, 7 May 2014 11:37:02 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1398739825.0.1399455422187.JavaMail.jenkins@elk> In-Reply-To: <873482146.1.1399450403201.JavaMail.jenkins@elk> References: <873482146.1.1399450403201.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-python-interface X-Jenkins-Result: SUCCESS X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.4 Subject: [Espressomd-maintainer] Jenkins build is back to normal : master-python-interface #102 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Wed, 07 May 2014 09:37:24 -0000 See From MAILER-DAEMON Wed May 07 05:37:55 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WhyIU-0000QA-Uw for mharc-espressomd-maintainer@gnu.org; Wed, 07 May 2014 05:37:55 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:35956) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WhyIO-0000GK-2N for espressomd-maintainer@nongnu.org; Wed, 07 May 2014 05:37:53 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WhyII-0004kL-DU for espressomd-maintainer@nongnu.org; Wed, 07 May 2014 05:37:48 -0400 Received: from hydra-out.rus.uni-stuttgart.de ([2001:7c0:2041:25::1:3]:45608 helo=hydra.rus.uni-stuttgart.de) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WhyIH-0004iu-Ua for espressomd-maintainer@nongnu.org; Wed, 07 May 2014 05:37:42 -0400 Received: from localhost (localhost [127.0.0.1]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP id 7565312C548 for ; Wed, 7 May 2014 11:37:40 +0200 (CEST) X-Virus-Scanned: by amavisd-new at hydra.rus.uni-stuttgart.de Received: from hydra.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (hydra.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id CsIifVJ-IFSx for ; Wed, 7 May 2014 11:37:34 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (ica1.uni-stuttgart.de [129.69.120.76]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Wed, 7 May 2014 11:37:34 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id AB8A0A40EC for ; Wed, 7 May 2014 11:37:34 +0200 (CEST) Date: Wed, 7 May 2014 11:37:34 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1591384009.1.1399455454687.JavaMail.jenkins@elk> In-Reply-To: <691190619.2.1399450451140.JavaMail.jenkins@elk> References: <691190619.2.1399450451140.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-dist X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2001:7c0:2041:25::1:3 Subject: [Espressomd-maintainer] Build failed in Jenkins: master-dist #122 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Wed, 07 May 2014 09:37:53 -0000 See Changes: [Olaf Lenz] Cuda verbose rule [Olaf Lenz] cuda_init is now built ------------------------------------------ [...truncated 121 lines...] checking for ld used by mpic++... /usr/x86_64-suse-linux/bin/ld -m elf_x86_64 checking if the linker (/usr/x86_64-suse-linux/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the mpic++ linker (/usr/x86_64-suse-linux/bin/ld -m elf_x86_64) supports shared libraries... yes checking for mpic++ option to produce PIC... -fPIC -DPIC checking if mpic++ PIC flag -fPIC -DPIC works... yes checking if mpic++ static flag -static works... no checking if mpic++ supports -c -o file.o... yes checking if mpic++ supports -c -o file.o... (cached) yes checking whether the mpic++ linker (/usr/x86_64-suse-linux/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for gawk... (cached) gawk checking for egrep... (cached) /usr/bin/grep -E checking whether ln -s works... yes checking for doxygen... /usr/bin/doxygen checking for dot... /usr/bin/dot checking for pdflatex... /usr/bin/pdflatex checking for makeindex... /usr/bin/makeindex checking for bibtex... /usr/bin/bibtex **************************************************************** * Checking for standard headers * **************************************************************** checking for ANSI C header files... (cached) yes checking arpa/inet.h usability... yes checking arpa/inet.h presence... yes checking for arpa/inet.h... yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking float.h usability... yes checking float.h presence... yes checking for float.h... yes checking for inttypes.h... (cached) yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking netdb.h usability... yes checking netdb.h presence... yes checking for netdb.h... yes checking netinet/in.h usability... yes checking netinet/in.h presence... yes checking for netinet/in.h... yes checking stddef.h usability... yes checking stddef.h presence... yes checking for stddef.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for strings.h... (cached) yes checking sys/file.h usability... yes checking sys/file.h presence... yes checking for sys/file.h... yes checking sys/socket.h usability... yes checking sys/socket.h presence... yes checking for sys/socket.h... yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking for unistd.h... (cached) yes **************************************************************** * Checking for standard functions * **************************************************************** checking for stdlib.h... (cached) yes checking for GNU libc compatible malloc... yes checking for working memcmp... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible realloc... yes checking sys/select.h usability... yes checking sys/select.h presence... yes checking for sys/select.h... yes checking for sys/socket.h... (cached) yes checking types of arguments for select... int,fd_set *,struct timeval * checking for size_t... yes checking for working strtod... yes checking for atexit... yes checking for floor... yes checking for getcwd... yes checking for gethostbyname... yes checking for memset... yes checking for pow... yes checking for rint... yes checking for select... yes checking for socket... yes checking for sqrt... yes **************************************************************** * Checking for required tools and libraries * **************************************************************** checking whether to use FFTW... yes checking for library containing fftw_plan_many_dft... -lfftw3 checking fftw3.h usability... yes checking fftw3.h presence... yes checking for fftw3.h... yes checking whether to use CUDA... yes checking for nvcc... /usr/local/cuda/bin/nvcc checking if /usr/local/cuda/bin/nvcc supports -c -o file.o... no checking if /usr/local/cuda/bin/nvcc supports -c -o file.o... (cached) no checking whether the /usr/local/cuda/bin/nvcc linker (/usr/x86_64-suse-linux/bin/ld -m elf_x86_64) supports shared libraries... yes checking how to hardcode library paths into programs... immediate checking for libcudart... yes checking for libcufft... yes checking whether CUDA compiles... yes checking whether CUDA runs... yes **************************************************************** * Checking for Python * **************************************************************** checking for a Python interpreter with version >= 2.5... python checking for python... /usr/local/bin/python checking for python version... 2.7 checking for python platform... linux2 checking for python script directory... ${prefix}/lib/python2.7/site-packages checking for python extension module directory... ${exec_prefix}/lib/python2.7/site-packages checking whether python -B works... yes checking whether to build the python interface... no **************************************************************** * Checking for Tcl/Tk * **************************************************************** checking whether to build the Tcl interface... yes checking for libtcl8.6... no checking for libtcl8.5... yes checking for tcl.h... yes checking whether to use Tk... yes **************************************************************** * Other settings * **************************************************************** checking whether to use efence... no checking whether the variable MYCONFIG is set... no checking the number of available CPUs... 8 **************************************************************** * Creating output files * **************************************************************** checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating config/Makefile config.status: creating config/myconfig-sample-header.hpp config.status: creating src/Makefile config.status: creating src/tcl/Makefile config.status: creating src/python/Makefile config.status: creating tools/Makefile config.status: creating scripts/Makefile config.status: creating testsuite/Makefile config.status: creating doc/Makefile config.status: creating doc/logo/Makefile config.status: creating doc/ug/Makefile config.status: creating doc/dg/Makefile config.status: creating doc/doxygen/Makefile config.status: creating doc/tutorials/Makefile config.status: creating doc/tutorials/01-lennard_jones/Makefile config.status: creating doc/tutorials/02-charged_system/Makefile config.status: creating doc/tutorials/03-object_in_fluid/Makefile config.status: creating doc/latexit.sh config.status: creating testsuite/runtest.sh config.status: creating tools/es_mpiexec config.status: creating src/acconfig.hpp config.status: executing depfiles commands config.status: executing libtool commands config.status: executing myconfig-sample.hpp commands **************************************************************** * Configuration summary * **************************************************************** platform detected = x86_64-unknown-linux-gnu package version = 3.2.0-831-g8e20db7 development sources = yes Compiler -------- compiler = mpic++ linker = /usr/x86_64-suse-linux/bin/ld -m elf_x86_64 c++ compiler flags = -Wall -O5 c++ preprocessor flags = linker flags = -L/usr/local/cuda/lib64 libraries = -ltcl8.5 -lcufft -lcudart -lfftw3 -lm using debug flags = using profiling flags = Libraries --------- FFTW = yes efence = no Cuda ---- CUDA compiler = /usr/local/cuda/bin/nvcc CUDA flags = --ptxas-options=-v -gencode arch=compute_20,code=compute_20 Tcl/Tk ------ Tcl version = tcl8.5 Tk version = none Python ------ python = /usr/local/bin/python -B build python interface = no Other settings -------------- config = myconfig.hpp installation prefix = /home/jenkins/Espresso number of test tasks = 8 mympiexec = mpiexec = /usr/lib64/mpi/gcc/openmpi/bin/mpiexec pdflatex = /usr/bin/pdflatex makeindex = /usr/bin/makeindex bibtex = /usr/bin/bibtex doxygen = /usr/bin/doxygen dot = /usr/bin/dot Not building Python interface. END CONFIGURE + maintainer/jenkins/dist.sh 1728 (process ID) old priority 0, new priority 5 srcdir= builddir= insource=true START DIST >make dist dist-xz make dist-xz dist-gzip am__post_remove_distdir='@:' make[1]: Entering directory ` cd .; sh config/genversion.sh -rd > if test -d "espresso-3.2.0-831-g8e20db7"; then find "espresso-3.2.0-831-g8e20db7" -type d ! -perm -200 -exec chmod u+w {} ';' && rm -rf "espresso-3.2.0-831-g8e20db7" || { sleep 5 && rm -rf "espresso-3.2.0-831-g8e20db7"; }; else :; fi test -d "espresso-3.2.0-831-g8e20db7" || mkdir "espresso-3.2.0-831-g8e20db7" (cd config && make top_distdir=../espresso-3.2.0-831-g8e20db7 distdir=../espresso-3.2.0-831-g8e20db7/config \ am__remove_distdir=: am__skip_length_check=: am__skip_mode_fix=: distdir) make[2]: Entering directory ` make[2]: Leaving directory ` (cd src && make top_distdir=../espresso-3.2.0-831-g8e20db7 distdir=../espresso-3.2.0-831-g8e20db7/src \ am__remove_distdir=: am__skip_length_check=: am__skip_mode_fix=: distdir) make[2]: Entering directory ` GEN config-features.cpp GEN config-version.cpp (cd tcl && make top_distdir=../../espresso-3.2.0-831-g8e20db7 distdir=../../espresso-3.2.0-831-g8e20db7/src/tcl \ am__remove_distdir=: am__skip_length_check=: am__skip_mode_fix=: distdir) make[3]: Entering directory ` make[3]: Leaving directory ` (cd python && make top_distdir=../../espresso-3.2.0-831-g8e20db7 distdir=../../espresso-3.2.0-831-g8e20db7/src/python \ am__remove_distdir=: am__skip_length_check=: am__skip_mode_fix=: distdir) make[3]: Entering directory ` make[3]: *** No rule to make target `gen_pxiconfig.pyx', needed by `distdir'. Stop. make[3]: Leaving directory ` make[2]: *** [distdir] Error 1 make[2]: Leaving directory ` make[1]: *** [distdir] Error 1 make[1]: Leaving directory ` make: *** [dist] Error 2 + exit 1 Build step 'Execute shell' marked build as failure Archiving artifacts From MAILER-DAEMON Wed May 07 06:07:56 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WhylY-0006YX-4i for mharc-espressomd-maintainer@gnu.org; Wed, 07 May 2014 06:07:56 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:43681) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WhylR-0006KJ-3F for espressomd-maintainer@nongnu.org; Wed, 07 May 2014 06:07:54 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WhylK-00073c-J8 for espressomd-maintainer@nongnu.org; Wed, 07 May 2014 06:07:49 -0400 Received: from medousa-out.rus.uni-stuttgart.de ([2001:7c0:2041:25::1:4]:60327 helo=medousa.rus.uni-stuttgart.de) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WhylK-00070B-5M for espressomd-maintainer@nongnu.org; Wed, 07 May 2014 06:07:42 -0400 Received: from localhost (localhost [127.0.0.1]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP id 4C98F37EED for ; Wed, 7 May 2014 12:07:40 +0200 (CEST) X-Virus-Scanned: by amavisd-new at medousa.rus.uni-stuttgart.de Received: from medousa.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (medousa.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id sIGdp1VQv0re for ; Wed, 7 May 2014 12:07:34 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (anoa.icp.uni-stuttgart.de [129.69.120.76]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Wed, 7 May 2014 12:07:34 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 78867A40EC for ; Wed, 7 May 2014 12:07:34 +0200 (CEST) Date: Wed, 7 May 2014 12:07:34 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <195818202.2.1399457254467.JavaMail.jenkins@elk> In-Reply-To: <1591384009.1.1399455454687.JavaMail.jenkins@elk> References: <1591384009.1.1399455454687.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-dist X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2001:7c0:2041:25::1:4 Subject: [Espressomd-maintainer] Build failed in Jenkins: master-dist #123 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Wed, 07 May 2014 10:07:54 -0000 See Changes: [Georg Rempfer] PDB data and scripts for testing. [Georg Rempfer] Temporary rescaling of pdb lengths, so that I can work with agrid=1. [Georg Rempfer] Proper fix for electrokinetics pdb parser ifdef problem. [Georg Rempfer] Deleted temporary test scripts. ------------------------------------------ [...truncated 121 lines...] checking for ld used by mpic++... /usr/x86_64-suse-linux/bin/ld -m elf_x86_64 checking if the linker (/usr/x86_64-suse-linux/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the mpic++ linker (/usr/x86_64-suse-linux/bin/ld -m elf_x86_64) supports shared libraries... yes checking for mpic++ option to produce PIC... -fPIC -DPIC checking if mpic++ PIC flag -fPIC -DPIC works... yes checking if mpic++ static flag -static works... no checking if mpic++ supports -c -o file.o... yes checking if mpic++ supports -c -o file.o... (cached) yes checking whether the mpic++ linker (/usr/x86_64-suse-linux/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for gawk... (cached) gawk checking for egrep... (cached) /usr/bin/grep -E checking whether ln -s works... yes checking for doxygen... /usr/bin/doxygen checking for dot... /usr/bin/dot checking for pdflatex... /usr/bin/pdflatex checking for makeindex... /usr/bin/makeindex checking for bibtex... /usr/bin/bibtex **************************************************************** * Checking for standard headers * **************************************************************** checking for ANSI C header files... (cached) yes checking arpa/inet.h usability... yes checking arpa/inet.h presence... yes checking for arpa/inet.h... yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking float.h usability... yes checking float.h presence... yes checking for float.h... yes checking for inttypes.h... (cached) yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking netdb.h usability... yes checking netdb.h presence... yes checking for netdb.h... yes checking netinet/in.h usability... yes checking netinet/in.h presence... yes checking for netinet/in.h... yes checking stddef.h usability... yes checking stddef.h presence... yes checking for stddef.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for strings.h... (cached) yes checking sys/file.h usability... yes checking sys/file.h presence... yes checking for sys/file.h... yes checking sys/socket.h usability... yes checking sys/socket.h presence... yes checking for sys/socket.h... yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking for unistd.h... (cached) yes **************************************************************** * Checking for standard functions * **************************************************************** checking for stdlib.h... (cached) yes checking for GNU libc compatible malloc... yes checking for working memcmp... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible realloc... yes checking sys/select.h usability... yes checking sys/select.h presence... yes checking for sys/select.h... yes checking for sys/socket.h... (cached) yes checking types of arguments for select... int,fd_set *,struct timeval * checking for size_t... yes checking for working strtod... yes checking for atexit... yes checking for floor... yes checking for getcwd... yes checking for gethostbyname... yes checking for memset... yes checking for pow... yes checking for rint... yes checking for select... yes checking for socket... yes checking for sqrt... yes **************************************************************** * Checking for required tools and libraries * **************************************************************** checking whether to use FFTW... yes checking for library containing fftw_plan_many_dft... -lfftw3 checking fftw3.h usability... yes checking fftw3.h presence... yes checking for fftw3.h... yes checking whether to use CUDA... yes checking for nvcc... /usr/local/cuda/bin/nvcc checking if /usr/local/cuda/bin/nvcc supports -c -o file.o... no checking if /usr/local/cuda/bin/nvcc supports -c -o file.o... (cached) no checking whether the /usr/local/cuda/bin/nvcc linker (/usr/x86_64-suse-linux/bin/ld -m elf_x86_64) supports shared libraries... yes checking how to hardcode library paths into programs... immediate checking for libcudart... yes checking for libcufft... yes checking whether CUDA compiles... yes checking whether CUDA runs... yes **************************************************************** * Checking for Python * **************************************************************** checking for a Python interpreter with version >= 2.5... python checking for python... /usr/local/bin/python checking for python version... 2.7 checking for python platform... linux2 checking for python script directory... ${prefix}/lib/python2.7/site-packages checking for python extension module directory... ${exec_prefix}/lib/python2.7/site-packages checking whether python -B works... yes checking whether to build the python interface... no **************************************************************** * Checking for Tcl/Tk * **************************************************************** checking whether to build the Tcl interface... yes checking for libtcl8.6... no checking for libtcl8.5... yes checking for tcl.h... yes checking whether to use Tk... yes **************************************************************** * Other settings * **************************************************************** checking whether to use efence... no checking whether the variable MYCONFIG is set... no checking the number of available CPUs... 8 **************************************************************** * Creating output files * **************************************************************** checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating config/Makefile config.status: creating config/myconfig-sample-header.hpp config.status: creating src/Makefile config.status: creating src/tcl/Makefile config.status: creating src/python/Makefile config.status: creating tools/Makefile config.status: creating scripts/Makefile config.status: creating testsuite/Makefile config.status: creating doc/Makefile config.status: creating doc/logo/Makefile config.status: creating doc/ug/Makefile config.status: creating doc/dg/Makefile config.status: creating doc/doxygen/Makefile config.status: creating doc/tutorials/Makefile config.status: creating doc/tutorials/01-lennard_jones/Makefile config.status: creating doc/tutorials/02-charged_system/Makefile config.status: creating doc/tutorials/03-object_in_fluid/Makefile config.status: creating doc/latexit.sh config.status: creating testsuite/runtest.sh config.status: creating tools/es_mpiexec config.status: creating src/acconfig.hpp config.status: executing depfiles commands config.status: executing libtool commands config.status: executing myconfig-sample.hpp commands **************************************************************** * Configuration summary * **************************************************************** platform detected = x86_64-unknown-linux-gnu package version = 3.2.0-837-gb7943dd development sources = yes Compiler -------- compiler = mpic++ linker = /usr/x86_64-suse-linux/bin/ld -m elf_x86_64 c++ compiler flags = -Wall -O5 c++ preprocessor flags = linker flags = -L/usr/local/cuda/lib64 libraries = -ltcl8.5 -lcufft -lcudart -lfftw3 -lm using debug flags = using profiling flags = Libraries --------- FFTW = yes efence = no Cuda ---- CUDA compiler = /usr/local/cuda/bin/nvcc CUDA flags = --ptxas-options=-v -gencode arch=compute_20,code=compute_20 Tcl/Tk ------ Tcl version = tcl8.5 Tk version = none Python ------ python = /usr/local/bin/python -B build python interface = no Other settings -------------- config = myconfig.hpp installation prefix = /home/jenkins/Espresso number of test tasks = 8 mympiexec = mpiexec = /usr/lib64/mpi/gcc/openmpi/bin/mpiexec pdflatex = /usr/bin/pdflatex makeindex = /usr/bin/makeindex bibtex = /usr/bin/bibtex doxygen = /usr/bin/doxygen dot = /usr/bin/dot Not building Python interface. END CONFIGURE + maintainer/jenkins/dist.sh 7000 (process ID) old priority 0, new priority 5 srcdir= builddir= insource=true START DIST >make dist dist-xz make dist-xz dist-gzip am__post_remove_distdir='@:' make[1]: Entering directory ` cd .; sh config/genversion.sh -rd > if test -d "espresso-3.2.0-837-gb7943dd"; then find "espresso-3.2.0-837-gb7943dd" -type d ! -perm -200 -exec chmod u+w {} ';' && rm -rf "espresso-3.2.0-837-gb7943dd" || { sleep 5 && rm -rf "espresso-3.2.0-837-gb7943dd"; }; else :; fi test -d "espresso-3.2.0-837-gb7943dd" || mkdir "espresso-3.2.0-837-gb7943dd" (cd config && make top_distdir=../espresso-3.2.0-837-gb7943dd distdir=../espresso-3.2.0-837-gb7943dd/config \ am__remove_distdir=: am__skip_length_check=: am__skip_mode_fix=: distdir) make[2]: Entering directory ` make[2]: Leaving directory ` (cd src && make top_distdir=../espresso-3.2.0-837-gb7943dd distdir=../espresso-3.2.0-837-gb7943dd/src \ am__remove_distdir=: am__skip_length_check=: am__skip_mode_fix=: distdir) make[2]: Entering directory ` GEN config-features.cpp GEN config-version.cpp (cd tcl && make top_distdir=../../espresso-3.2.0-837-gb7943dd distdir=../../espresso-3.2.0-837-gb7943dd/src/tcl \ am__remove_distdir=: am__skip_length_check=: am__skip_mode_fix=: distdir) make[3]: Entering directory ` make[3]: Leaving directory ` (cd python && make top_distdir=../../espresso-3.2.0-837-gb7943dd distdir=../../espresso-3.2.0-837-gb7943dd/src/python \ am__remove_distdir=: am__skip_length_check=: am__skip_mode_fix=: distdir) make[3]: Entering directory ` make[3]: *** No rule to make target `gen_pxiconfig.pyx', needed by `distdir'. Stop. make[3]: Leaving directory ` make[2]: *** [distdir] Error 1 make[2]: Leaving directory ` make[1]: *** [distdir] Error 1 make[1]: Leaving directory ` make: *** [dist] Error 2 + exit 1 Build step 'Execute shell' marked build as failure Archiving artifacts From MAILER-DAEMON Wed May 07 12:03:09 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1Wi4JJ-0002kl-GR for mharc-espressomd-maintainer@gnu.org; Wed, 07 May 2014 12:03:09 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:52556) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wi4JB-0002bJ-KF for espressomd-maintainer@nongnu.org; Wed, 07 May 2014 12:03:07 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1Wi4J5-0004p0-UQ for espressomd-maintainer@nongnu.org; Wed, 07 May 2014 12:03:01 -0400 Received: from charon.rus.uni-stuttgart.de ([129.69.192.1]:49821) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wi4J5-0004oj-FT for espressomd-maintainer@nongnu.org; Wed, 07 May 2014 12:02:55 -0400 Received: from localhost (localhost [127.0.0.1]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP id EA1CC5FDFB for ; Wed, 7 May 2014 18:02:53 +0200 (CEST) X-Virus-Scanned: by amavisd-new at charon.rus.uni-stuttgart.de Received: from charon.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (charon.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id e9HjO_YlUuJP for ; Wed, 7 May 2014 18:02:48 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (ica1.uni-stuttgart.de [129.69.120.76]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Wed, 7 May 2014 18:02:48 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 216A1A40EC for ; Wed, 7 May 2014 18:02:48 +0200 (CEST) Date: Wed, 7 May 2014 18:02:47 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <427087543.3.1399478568109.JavaMail.jenkins@elk> In-Reply-To: <195818202.2.1399457254467.JavaMail.jenkins@elk> References: <195818202.2.1399457254467.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-dist X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.1 Subject: [Espressomd-maintainer] Build failed in Jenkins: master-dist #124 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Wed, 07 May 2014 16:03:07 -0000 See Changes: [Olaf Lenz] Rewrote cython rules. [Olaf Lenz] Moved pyx-files to module. ------------------------------------------ [...truncated 127 lines...] checking if mpic++ supports -c -o file.o... yes checking if mpic++ supports -c -o file.o... (cached) yes checking whether the mpic++ linker (/usr/x86_64-suse-linux/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for gawk... (cached) gawk checking for egrep... (cached) /usr/bin/grep -E checking whether ln -s works... yes checking for doxygen... /usr/bin/doxygen checking for dot... /usr/bin/dot checking for pdflatex... /usr/bin/pdflatex checking for makeindex... /usr/bin/makeindex checking for bibtex... /usr/bin/bibtex **************************************************************** * Checking for standard headers * **************************************************************** checking for ANSI C header files... (cached) yes checking arpa/inet.h usability... yes checking arpa/inet.h presence... yes checking for arpa/inet.h... yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking float.h usability... yes checking float.h presence... yes checking for float.h... yes checking for inttypes.h... (cached) yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking netdb.h usability... yes checking netdb.h presence... yes checking for netdb.h... yes checking netinet/in.h usability... yes checking netinet/in.h presence... yes checking for netinet/in.h... yes checking stddef.h usability... yes checking stddef.h presence... yes checking for stddef.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for strings.h... (cached) yes checking sys/file.h usability... yes checking sys/file.h presence... yes checking for sys/file.h... yes checking sys/socket.h usability... yes checking sys/socket.h presence... yes checking for sys/socket.h... yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking for unistd.h... (cached) yes **************************************************************** * Checking for standard functions * **************************************************************** checking for stdlib.h... (cached) yes checking for GNU libc compatible malloc... yes checking for working memcmp... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible realloc... yes checking sys/select.h usability... yes checking sys/select.h presence... yes checking for sys/select.h... yes checking for sys/socket.h... (cached) yes checking types of arguments for select... int,fd_set *,struct timeval * checking for size_t... yes checking for working strtod... yes checking for atexit... yes checking for floor... yes checking for getcwd... yes checking for gethostbyname... yes checking for memset... yes checking for pow... yes checking for rint... yes checking for select... yes checking for socket... yes checking for sqrt... yes **************************************************************** * Checking for required tools and libraries * **************************************************************** checking whether to use FFTW... yes checking for library containing fftw_plan_many_dft... -lfftw3 checking fftw3.h usability... yes checking fftw3.h presence... yes checking for fftw3.h... yes checking whether to use CUDA... yes checking for nvcc... /usr/local/cuda/bin/nvcc checking if /usr/local/cuda/bin/nvcc supports -c -o file.o... no checking if /usr/local/cuda/bin/nvcc supports -c -o file.o... (cached) no checking whether the /usr/local/cuda/bin/nvcc linker (/usr/x86_64-suse-linux/bin/ld -m elf_x86_64) supports shared libraries... yes checking how to hardcode library paths into programs... immediate checking for libcudart... yes checking for libcufft... yes checking whether CUDA compiles... yes checking whether CUDA runs... yes **************************************************************** * Checking for Python * **************************************************************** checking for a Python interpreter with version >= 2.5... python checking for python... /usr/local/bin/python checking for python version... 2.7 checking for python platform... linux2 checking for python script directory... ${prefix}/lib/python2.7/site-packages checking for python extension module directory... ${exec_prefix}/lib/python2.7/site-packages checking whether python -B works... yes checking whether to build the python interface... no **************************************************************** * Checking for Tcl/Tk * **************************************************************** checking whether to build the Tcl interface... yes checking for libtcl8.6... no checking for libtcl8.5... yes checking for tcl.h... yes checking whether to use Tk... yes **************************************************************** * Other settings * **************************************************************** checking whether to use efence... no checking whether the variable MYCONFIG is set... no checking the number of available CPUs... 8 **************************************************************** * Creating output files * **************************************************************** checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating config/Makefile config.status: creating config/myconfig-sample-header.hpp config.status: creating src/Makefile config.status: creating src/tcl/Makefile config.status: creating src/python/Makefile config.status: creating src/python/espresso/Makefile config.status: creating tools/Makefile config.status: creating scripts/Makefile config.status: creating testsuite/Makefile config.status: creating doc/Makefile config.status: creating doc/logo/Makefile config.status: creating doc/ug/Makefile config.status: creating doc/dg/Makefile config.status: creating doc/doxygen/Makefile config.status: creating doc/tutorials/Makefile config.status: creating doc/tutorials/01-lennard_jones/Makefile config.status: creating doc/tutorials/02-charged_system/Makefile config.status: creating doc/tutorials/03-object_in_fluid/Makefile config.status: creating doc/latexit.sh config.status: creating testsuite/runtest.sh config.status: creating tools/es_mpiexec config.status: creating src/acconfig.hpp config.status: executing depfiles commands config.status: executing libtool commands config.status: executing myconfig-sample.hpp commands **************************************************************** * Configuration summary * **************************************************************** platform detected = x86_64-unknown-linux-gnu package version = 3.2.0-839-gaacb941 development sources = yes Compiler -------- compiler = mpic++ linker = /usr/x86_64-suse-linux/bin/ld -m elf_x86_64 c++ compiler flags = -Wall -O5 c++ preprocessor flags = linker flags = -L/usr/local/cuda/lib64 libraries = -ltcl8.5 -lcufft -lcudart -lfftw3 -lm using debug flags = using profiling flags = Libraries --------- FFTW = yes efence = no Cuda ---- CUDA compiler = /usr/local/cuda/bin/nvcc CUDA flags = --ptxas-options=-v -gencode arch=compute_20,code=compute_20 Tcl/Tk ------ Tcl version = tcl8.5 Tk version = none Python ------ python = /usr/local/bin/python -B build python interface = no Other settings -------------- config = myconfig.hpp installation prefix = /home/jenkins/Espresso number of test tasks = 8 mympiexec = mpiexec = /usr/lib64/mpi/gcc/openmpi/bin/mpiexec pdflatex = /usr/bin/pdflatex makeindex = /usr/bin/makeindex bibtex = /usr/bin/bibtex doxygen = /usr/bin/doxygen dot = /usr/bin/dot Not building Python interface. END CONFIGURE + maintainer/jenkins/dist.sh 13651 (process ID) old priority 0, new priority 5 srcdir= builddir= insource=true START DIST >make dist dist-xz make dist-xz dist-gzip am__post_remove_distdir='@:' make[1]: Entering directory ` cd .; sh config/genversion.sh -rd > if test -d "espresso-3.2.0-839-gaacb941"; then find "espresso-3.2.0-839-gaacb941" -type d ! -perm -200 -exec chmod u+w {} ';' && rm -rf "espresso-3.2.0-839-gaacb941" || { sleep 5 && rm -rf "espresso-3.2.0-839-gaacb941"; }; else :; fi test -d "espresso-3.2.0-839-gaacb941" || mkdir "espresso-3.2.0-839-gaacb941" (cd config && make top_distdir=../espresso-3.2.0-839-gaacb941 distdir=../espresso-3.2.0-839-gaacb941/config \ am__remove_distdir=: am__skip_length_check=: am__skip_mode_fix=: distdir) make[2]: Entering directory ` make[2]: Leaving directory ` (cd src && make top_distdir=../espresso-3.2.0-839-gaacb941 distdir=../espresso-3.2.0-839-gaacb941/src \ am__remove_distdir=: am__skip_length_check=: am__skip_mode_fix=: distdir) make[2]: Entering directory ` GEN config-features.cpp GEN config-version.cpp (cd tcl && make top_distdir=../../espresso-3.2.0-839-gaacb941 distdir=../../espresso-3.2.0-839-gaacb941/src/tcl \ am__remove_distdir=: am__skip_length_check=: am__skip_mode_fix=: distdir) make[3]: Entering directory ` make[3]: Leaving directory ` (cd python && make top_distdir=../../espresso-3.2.0-839-gaacb941 distdir=../../espresso-3.2.0-839-gaacb941/src/python \ am__remove_distdir=: am__skip_length_check=: am__skip_mode_fix=: distdir) make[3]: Entering directory ` (cd espresso && make top_distdir=../../../espresso-3.2.0-839-gaacb941 distdir=../../../espresso-3.2.0-839-gaacb941/src/python/espresso \ am__remove_distdir=: am__skip_length_check=: am__skip_mode_fix=: distdir) make[4]: Entering directory ` make[4]: *** No rule to make target `../../../src/myconfig-final.hpp', needed by `gen_pxiconfig.cpp'. Stop. make[4]: Leaving directory ` make[3]: *** [distdir] Error 1 make[3]: Leaving directory ` make[2]: *** [distdir] Error 1 make[2]: Leaving directory ` make[1]: *** [distdir] Error 1 make[1]: Leaving directory ` make: *** [dist] Error 2 + exit 1 Build step 'Execute shell' marked build as failure Archiving artifacts From MAILER-DAEMON Wed May 07 18:53:55 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WiAip-0003jy-G2 for mharc-espressomd-maintainer@gnu.org; Wed, 07 May 2014 18:53:55 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:34738) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WiAih-0003ih-Su for espressomd-maintainer@nongnu.org; Wed, 07 May 2014 18:53:53 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WiAic-00070j-6M for espressomd-maintainer@nongnu.org; Wed, 07 May 2014 18:53:47 -0400 Received: from medousa.rus.uni-stuttgart.de ([129.69.192.4]:52688) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WiAib-00070Q-SW for espressomd-maintainer@nongnu.org; Wed, 07 May 2014 18:53:42 -0400 Received: from localhost (localhost [127.0.0.1]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP id 3109E37EDD for ; Thu, 8 May 2014 00:53:40 +0200 (CEST) X-Virus-Scanned: by amavisd-new at medousa.rus.uni-stuttgart.de Received: from medousa.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (medousa.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id 5AKc5v8SXFWk for ; Thu, 8 May 2014 00:53:34 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (anoa.icp.uni-stuttgart.de [129.69.120.76]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Thu, 8 May 2014 00:53:34 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 5D43AA40EC for ; Thu, 8 May 2014 00:53:34 +0200 (CEST) Date: Thu, 8 May 2014 00:53:34 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1527987552.4.1399503214261.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-nightly-distcheck X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.4 Subject: [Espressomd-maintainer] Build failed in Jenkins: master-nightly-distcheck #73 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Wed, 07 May 2014 22:53:53 -0000 See Changes: [Olaf Lenz] Rewrote cython rules. [Olaf Lenz] Moved pyx-files to module. ------------------------------------------ [...truncated 123 lines...] checking whether the mpic++ linker (/usr/x86_64-suse-linux/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for gawk... (cached) gawk checking for egrep... (cached) /usr/bin/grep -E checking whether ln -s works... yes checking for doxygen... /usr/bin/doxygen checking for dot... /usr/bin/dot checking for pdflatex... /usr/bin/pdflatex checking for makeindex... /usr/bin/makeindex checking for bibtex... /usr/bin/bibtex **************************************************************** * Checking for standard headers * **************************************************************** checking for ANSI C header files... (cached) yes checking arpa/inet.h usability... yes checking arpa/inet.h presence... yes checking for arpa/inet.h... yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking float.h usability... yes checking float.h presence... yes checking for float.h... yes checking for inttypes.h... (cached) yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking netdb.h usability... yes checking netdb.h presence... yes checking for netdb.h... yes checking netinet/in.h usability... yes checking netinet/in.h presence... yes checking for netinet/in.h... yes checking stddef.h usability... yes checking stddef.h presence... yes checking for stddef.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for strings.h... (cached) yes checking sys/file.h usability... yes checking sys/file.h presence... yes checking for sys/file.h... yes checking sys/socket.h usability... yes checking sys/socket.h presence... yes checking for sys/socket.h... yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking for unistd.h... (cached) yes **************************************************************** * Checking for standard functions * **************************************************************** checking for stdlib.h... (cached) yes checking for GNU libc compatible malloc... yes checking for working memcmp... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible realloc... yes checking sys/select.h usability... yes checking sys/select.h presence... yes checking for sys/select.h... yes checking for sys/socket.h... (cached) yes checking types of arguments for select... int,fd_set *,struct timeval * checking for size_t... yes checking for working strtod... yes checking for atexit... yes checking for floor... yes checking for getcwd... yes checking for gethostbyname... yes checking for memset... yes checking for pow... yes checking for rint... yes checking for select... yes checking for socket... yes checking for sqrt... yes **************************************************************** * Checking for required tools and libraries * **************************************************************** checking whether to use FFTW... yes checking for library containing fftw_plan_many_dft... -lfftw3 checking fftw3.h usability... yes checking fftw3.h presence... yes checking for fftw3.h... yes checking whether to use CUDA... yes checking for nvcc... /usr/local/cuda/bin/nvcc checking if /usr/local/cuda/bin/nvcc supports -c -o file.o... no checking if /usr/local/cuda/bin/nvcc supports -c -o file.o... (cached) no checking whether the /usr/local/cuda/bin/nvcc linker (/usr/x86_64-suse-linux/bin/ld -m elf_x86_64) supports shared libraries... yes checking how to hardcode library paths into programs... immediate checking for libcudart... yes checking for libcufft... yes checking whether CUDA compiles... yes checking whether CUDA runs... yes **************************************************************** * Checking for Python * **************************************************************** checking for a Python interpreter with version >= 2.5... python checking for python... /usr/local/bin/python checking for python version... 2.7 checking for python platform... linux2 checking for python script directory... ${prefix}/lib/python2.7/site-packages checking for python extension module directory... ${exec_prefix}/lib/python2.7/site-packages checking whether python -B works... yes checking whether to build the python interface... no **************************************************************** * Checking for Tcl/Tk * **************************************************************** checking whether to build the Tcl interface... yes checking for libtcl8.6... no checking for libtcl8.5... yes checking for tcl.h... yes checking whether to use Tk... yes **************************************************************** * Other settings * **************************************************************** checking whether to use efence... no checking whether the variable MYCONFIG is set... no checking the number of available CPUs... 8 **************************************************************** * Creating output files * **************************************************************** checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating config/Makefile config.status: creating config/myconfig-sample-header.hpp config.status: creating src/Makefile config.status: creating src/tcl/Makefile config.status: creating src/python/Makefile config.status: creating src/python/espresso/Makefile config.status: creating tools/Makefile config.status: creating scripts/Makefile config.status: creating testsuite/Makefile config.status: creating doc/Makefile config.status: creating doc/logo/Makefile config.status: creating doc/ug/Makefile config.status: creating doc/dg/Makefile config.status: creating doc/doxygen/Makefile config.status: creating doc/tutorials/Makefile config.status: creating doc/tutorials/01-lennard_jones/Makefile config.status: creating doc/tutorials/02-charged_system/Makefile config.status: creating doc/tutorials/03-object_in_fluid/Makefile config.status: creating doc/latexit.sh config.status: creating testsuite/runtest.sh config.status: creating tools/es_mpiexec config.status: creating src/acconfig.hpp config.status: executing depfiles commands config.status: executing libtool commands config.status: executing myconfig-sample.hpp commands **************************************************************** * Configuration summary * **************************************************************** platform detected = x86_64-unknown-linux-gnu package version = 3.2.0-839-gaacb941 development sources = yes Compiler -------- compiler = mpic++ linker = /usr/x86_64-suse-linux/bin/ld -m elf_x86_64 c++ compiler flags = -Wall -O5 c++ preprocessor flags = linker flags = -L/usr/local/cuda/lib64 libraries = -ltcl8.5 -lcufft -lcudart -lfftw3 -lm using debug flags = using profiling flags = Libraries --------- FFTW = yes efence = no Cuda ---- CUDA compiler = /usr/local/cuda/bin/nvcc CUDA flags = --ptxas-options=-v -gencode arch=compute_20,code=compute_20 Tcl/Tk ------ Tcl version = tcl8.5 Tk version = none Python ------ python = /usr/local/bin/python -B build python interface = no Other settings -------------- config = myconfig.hpp installation prefix = /home/jenkins/Espresso number of test tasks = 8 mympiexec = mpiexec = /usr/lib64/mpi/gcc/openmpi/bin/mpiexec pdflatex = /usr/bin/pdflatex makeindex = /usr/bin/makeindex bibtex = /usr/bin/bibtex doxygen = /usr/bin/doxygen dot = /usr/bin/dot Not building Python interface. END CONFIGURE + maintainer/jenkins/distcheck.sh 30211 (process ID) old priority 0, new priority 5 srcdir= builddir= insource=true distcheck_flags= START DISTCHECK >make distcheck DISTCHECK_CONFIGURE_FLAGS="" make dist-xz dist-gzip am__post_remove_distdir='@:' make[1]: Entering directory ` cd .; sh config/genversion.sh -rd > if test -d "espresso-3.2.0-839-gaacb941"; then find "espresso-3.2.0-839-gaacb941" -type d ! -perm -200 -exec chmod u+w {} ';' && rm -rf "espresso-3.2.0-839-gaacb941" || { sleep 5 && rm -rf "espresso-3.2.0-839-gaacb941"; }; else :; fi test -d "espresso-3.2.0-839-gaacb941" || mkdir "espresso-3.2.0-839-gaacb941" (cd config && make top_distdir=../espresso-3.2.0-839-gaacb941 distdir=../espresso-3.2.0-839-gaacb941/config \ am__remove_distdir=: am__skip_length_check=: am__skip_mode_fix=: distdir) make[2]: Entering directory ` make[2]: Leaving directory ` (cd src && make top_distdir=../espresso-3.2.0-839-gaacb941 distdir=../espresso-3.2.0-839-gaacb941/src \ am__remove_distdir=: am__skip_length_check=: am__skip_mode_fix=: distdir) make[2]: Entering directory ` GEN config-features.cpp GEN config-version.cpp (cd tcl && make top_distdir=../../espresso-3.2.0-839-gaacb941 distdir=../../espresso-3.2.0-839-gaacb941/src/tcl \ am__remove_distdir=: am__skip_length_check=: am__skip_mode_fix=: distdir) make[3]: Entering directory ` make[3]: Leaving directory ` (cd python && make top_distdir=../../espresso-3.2.0-839-gaacb941 distdir=../../espresso-3.2.0-839-gaacb941/src/python \ am__remove_distdir=: am__skip_length_check=: am__skip_mode_fix=: distdir) make[3]: Entering directory ` (cd espresso && make top_distdir=../../../espresso-3.2.0-839-gaacb941 distdir=../../../espresso-3.2.0-839-gaacb941/src/python/espresso \ am__remove_distdir=: am__skip_length_check=: am__skip_mode_fix=: distdir) make[4]: Entering directory ` make[4]: *** No rule to make target `../../../src/myconfig-final.hpp', needed by `gen_pxiconfig.cpp'. Stop. make[4]: Leaving directory ` make[3]: *** [distdir] Error 1 make[3]: Leaving directory ` make[2]: *** [distdir] Error 1 make[2]: Leaving directory ` make[1]: *** [distdir] Error 1 make[1]: Leaving directory ` make: *** [dist] Error 2 + exit 1 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE Archiving artifacts From MAILER-DAEMON Thu May 08 04:45:58 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WiJxl-0003qb-8D for mharc-espressomd-maintainer@gnu.org; Thu, 08 May 2014 04:45:57 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:47017) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WiJxc-0003km-3v for espressomd-maintainer@nongnu.org; Thu, 08 May 2014 04:45:55 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WiJxR-0004OY-IL for espressomd-maintainer@nongnu.org; Thu, 08 May 2014 04:45:48 -0400 Received: from charon.rus.uni-stuttgart.de ([129.69.192.1]:59727) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WiJxR-0004Bv-Co for espressomd-maintainer@nongnu.org; Thu, 08 May 2014 04:45:37 -0400 Received: from localhost (localhost [127.0.0.1]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP id 406625FDD6 for ; Thu, 8 May 2014 10:45:29 +0200 (CEST) X-Virus-Scanned: by amavisd-new at charon.rus.uni-stuttgart.de Received: from charon.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (charon.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id 6y1qKh3DRJJo for ; Thu, 8 May 2014 10:45:18 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (ica1.uni-stuttgart.de [129.69.120.76]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Thu, 8 May 2014 10:45:18 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id BD515A40EC for ; Thu, 8 May 2014 10:45:18 +0200 (CEST) Date: Thu, 8 May 2014 10:45:18 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <983191773.5.1399538718747.JavaMail.jenkins@elk> In-Reply-To: <427087543.3.1399478568109.JavaMail.jenkins@elk> References: <427087543.3.1399478568109.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-dist X-Jenkins-Result: SUCCESS X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.1 Subject: [Espressomd-maintainer] Jenkins build is back to normal : master-dist #125 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Thu, 08 May 2014 08:45:55 -0000 See From MAILER-DAEMON Thu May 08 04:52:39 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WiK4F-0002bP-Cj for mharc-espressomd-maintainer@gnu.org; Thu, 08 May 2014 04:52:39 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:48168) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WiK46-0002NJ-0h for espressomd-maintainer@nongnu.org; Thu, 08 May 2014 04:52:37 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WiK3z-0006l1-7o for espressomd-maintainer@nongnu.org; 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charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-nightly-distcheck X-Jenkins-Result: SUCCESS X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.3 Subject: [Espressomd-maintainer] Jenkins build is back to normal : master-nightly-distcheck #74 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Thu, 08 May 2014 08:52:37 -0000 See From MAILER-DAEMON Thu May 08 05:06:21 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WiKHU-0002ti-V7 for mharc-espressomd-maintainer@gnu.org; Thu, 08 May 2014 05:06:21 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:50483) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WiKHM-0002gF-9a for espressomd-maintainer@nongnu.org; Thu, 08 May 2014 05:06:19 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WiKHF-0002v4-GC for espressomd-maintainer@nongnu.org; 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Thu, 8 May 2014 11:05:01 +0200 (CEST) Date: Thu, 8 May 2014 11:05:01 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1791991813.0.1399539901631.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: rest2,3core X-Jenkins-Result: UNSTABLE X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.4 Subject: [Espressomd-maintainer] =?utf-8?q?Jenkins_build_became_unstable?= =?utf-8?q?=3A__master-nightly-multiconfig_=C2=BB_rest2=2C3core_=2383?= X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Thu, 08 May 2014 09:06:19 -0000 See From MAILER-DAEMON Thu May 08 05:18:53 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WiKTd-0002Ps-GQ for mharc-espressomd-maintainer@gnu.org; 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X-Received-From: 2001:7c0:2041:25::1:3 Subject: [Espressomd-maintainer] =?utf-8?q?Jenkins_build_is_back_to_stable?= =?utf-8?q?_=3A_master-nightly-multiconfig_=C2=BB_rest2=2C3core_=2384?= X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Thu, 08 May 2014 09:18:52 -0000 See From MAILER-DAEMON Thu May 08 05:32:15 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WiKgZ-0004nE-6t for mharc-espressomd-maintainer@gnu.org; Thu, 08 May 2014 05:32:15 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:57904) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WiKgR-0004n1-CG for espressomd-maintainer@nongnu.org; Thu, 08 May 2014 05:32:13 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WiKgL-0004Ay-EJ for espressomd-maintainer@nongnu.org; Thu, 08 May 2014 05:32:07 -0400 Received: from [2001:4830:134:6::a] (port=56179 helo=frontend.savannah.gnu.org) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WiKgL-0004At-BE for espressomd-maintainer@nongnu.org; Thu, 08 May 2014 05:32:01 -0400 Received: from www-data by frontend.savannah.gnu.org with local (Exim 4.72) (envelope-from ) id 1WiKgK-00051i-T9; Thu, 08 May 2014 09:32:00 +0000 Date: Thu, 08 May 2014 09:32:00 +0000 To: Rudolf Weeber , espressomd-maintainer@nongnu.org X-PHP-Originating-Script: 0:sendmail.php From: Rudolf Weeber X-Savane-Server: savannah.nongnu.org:443 [140.186.70.71] MIME-Version: 1.0 Content-Type: text/plain;charset=UTF-8 X-Savane-Project: espressomd X-Savane-Tracker: task X-Savane-Item-ID: 13199 User-Agent: ELinks/0.12~pre6-1ubuntu1 (textmode; Ubuntu; Linux 3.11.0-14-generic x86_64; 120x33-2) X-Apparently-From: 62.158.146.165 (Savane authenticated user rudolfweeber) Message-Id: <20140508-113159.sv80910.44051@savannah.nongnu.org> References: In-Reply-To: X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2001:4830:134:6::a Subject: [Espressomd-maintainer] [task #13199] Make partcfg[] a hashmap X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Thu, 08 May 2014 09:32:13 -0000 URL: Summary: Make partcfg[] a hashmap Project: ESPResSo Submitted by: rudolfweeber Submitted on: Thu 08 May 2014 11:31:59 AM CEST Should Start On: Thu 08 May 2014 12:00:00 AM CEST Should be Finished on: Thu 08 May 2014 12:00:00 AM CEST Category: Simulation core Priority: 3 - Low Status: None Assigned to: None Open/Closed: Open Discussion Lock: Any Planned Release: None _______________________________________________________ Details: This will get rid of the sorting of partcfg[] when virtual sites are compiled in. It will also make it possible to have non-sequential particle numbering in conjunction with vs. _______________________________________________________ Reply to this item at: _______________________________________________ Message sent via/by Savannah http://savannah.nongnu.org/ From MAILER-DAEMON Mon May 12 22:21:10 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1Wk2L8-0008Kj-03 for mharc-espressomd-maintainer@gnu.org; Mon, 12 May 2014 22:21:10 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:59615) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wk2Ky-0008J5-PF for espressomd-maintainer@nongnu.org; Mon, 12 May 2014 22:21:07 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1Wk2Kr-0006vg-67 for espressomd-maintainer@nongnu.org; Mon, 12 May 2014 22:21:00 -0400 Received: from charon.rus.uni-stuttgart.de ([129.69.192.1]:44272) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wk2Kq-0006tf-VU for espressomd-maintainer@nongnu.org; Mon, 12 May 2014 22:20:53 -0400 Received: from localhost (localhost [127.0.0.1]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP id 128C55FE6D for ; Tue, 13 May 2014 04:20:43 +0200 (CEST) X-Virus-Scanned: by amavisd-new at charon.rus.uni-stuttgart.de Received: from charon.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (charon.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id D1QOJT3lcvtV for ; Tue, 13 May 2014 04:20:38 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (ica1.uni-stuttgart.de [129.69.120.76]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Tue, 13 May 2014 04:20:38 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 65832A40EE for ; Tue, 13 May 2014 04:20:38 +0200 (CEST) Date: Tue, 13 May 2014 04:20:38 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1568226074.2.1399947638338.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: shanchen,nompi X-Jenkins-Result: UNSTABLE X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.1 Subject: [Espressomd-maintainer] =?utf-8?q?Jenkins_build_became_unstable?= =?utf-8?q?=3A__master-nightly-multiconfig_=C2=BB_shanchen=2Cnompi_=2385?= X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Tue, 13 May 2014 02:21:07 -0000 See From MAILER-DAEMON Mon May 12 22:21:12 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1Wk2LA-0008Ky-3D for mharc-espressomd-maintainer@gnu.org; Mon, 12 May 2014 22:21:12 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:59655) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wk2L2-0008Jp-Ek for espressomd-maintainer@nongnu.org; Mon, 12 May 2014 22:21:11 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1Wk2Kv-0006yB-2X for espressomd-maintainer@nongnu.org; Mon, 12 May 2014 22:21:04 -0400 Received: from hydra-out.rus.uni-stuttgart.de ([2001:7c0:2041:25::1:3]:36803 helo=hydra.rus.uni-stuttgart.de) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wk2Ku-0006xs-Rw for espressomd-maintainer@nongnu.org; Mon, 12 May 2014 22:20:56 -0400 Received: from localhost (localhost [127.0.0.1]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP id 1880812C889 for ; Tue, 13 May 2014 04:20:56 +0200 (CEST) X-Virus-Scanned: by amavisd-new at hydra.rus.uni-stuttgart.de Received: from hydra.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (hydra.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id sM2pbAmDsvN6 for ; Tue, 13 May 2014 04:20:51 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (smtp.icp.uni-stuttgart.de [129.69.120.76]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Tue, 13 May 2014 04:20:51 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 9C4B5A40EE for ; Tue, 13 May 2014 04:20:51 +0200 (CEST) Date: Tue, 13 May 2014 04:20:51 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <81632896.3.1399947651622.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: maxset,nompi X-Jenkins-Result: UNSTABLE X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2001:7c0:2041:25::1:3 Subject: [Espressomd-maintainer] =?utf-8?q?Jenkins_build_became_unstable?= =?utf-8?q?=3A__master-nightly-multiconfig_=C2=BB_maxset=2Cnompi_=2385?= X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Tue, 13 May 2014 02:21:11 -0000 See From MAILER-DAEMON Fri May 16 04:56:39 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WlDwV-0007gJ-Ps for mharc-espressomd-maintainer@gnu.org; Fri, 16 May 2014 04:56:39 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:50790) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WlDwN-0007Xv-QX for espressomd-maintainer@nongnu.org; Fri, 16 May 2014 04:56:38 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WlDwF-0003zH-Q7 for espressomd-maintainer@nongnu.org; Fri, 16 May 2014 04:56:31 -0400 Received: from charon.rus.uni-stuttgart.de ([129.69.192.1]:57156) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WlDwF-0003wK-L8 for espressomd-maintainer@nongnu.org; Fri, 16 May 2014 04:56:23 -0400 Received: from localhost (localhost [127.0.0.1]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP id 69A865FF3E for ; Fri, 16 May 2014 10:56:14 +0200 (CEST) X-Virus-Scanned: by amavisd-new at charon.rus.uni-stuttgart.de Received: from charon.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (charon.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id sRo5OqUJp83F for ; Fri, 16 May 2014 10:56:10 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (smtp.icp.uni-stuttgart.de [129.69.120.76]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Fri, 16 May 2014 10:56:10 +0200 (CEST) Received: from m-8d3a1d1d.on.site.uni-stuttgart.de (pudu.icp.uni-stuttgart.de [129.69.120.70]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 5058EA40EE for ; Fri, 16 May 2014 10:56:10 +0200 (CEST) Message-ID: <5375D2AB.50301@icp.uni-stuttgart.de> Date: Fri, 16 May 2014 10:56:11 +0200 From: Florian Fahrenberger User-Agent: Mozilla/5.0 (Macintosh; Intel Mac OS X 10.9; rv:24.0) Gecko/20100101 Thunderbird/24.5.0 MIME-Version: 1.0 To: ESPResSo maintainers X-Enigmail-Version: 1.6 Content-Type: text/plain; charset=ISO-8859-15 Content-Transfer-Encoding: quoted-printable X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.1 Subject: [Espressomd-maintainer] Citable Code on Github... X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Fri, 16 May 2014 08:56:38 -0000 Hi, maintainers! I have just been told by Sela (do you remember him?) that Github is working hard to make scientific code citable in an easier and more straightforward way: https://github.com/blog/1840-improving-github-for-science Might be interesting for ESPResSo? Just a thought... Floh --=20 Florian Fahrenberger, Institut f=FCr Computerphysik Allmandring 3, 70569 Stuttgart Tel: +49-(0)711/685-63594 Fax: +49-(0)711/685-63658 From MAILER-DAEMON Fri May 16 05:25:20 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WlEOF-0004K6-Vv for mharc-espressomd-maintainer@gnu.org; Fri, 16 May 2014 05:25:19 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:56829) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WlEOE-0004Jq-8g for espressomd-maintainer@nongnu.org; Fri, 16 May 2014 05:25:19 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WlEOD-0005oQ-3P for espressomd-maintainer@nongnu.org; Fri, 16 May 2014 05:25:18 -0400 Received: from mail-we0-x22b.google.com ([2a00:1450:400c:c03::22b]:46372) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WlEOC-0005l8-Qu for espressomd-maintainer@nongnu.org; Fri, 16 May 2014 05:25:16 -0400 Received: by mail-we0-f171.google.com with SMTP id w62so2312600wes.16 for ; Fri, 16 May 2014 02:25:15 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20120113; h=mime-version:sender:in-reply-to:references:from:date:message-id :subject:to:cc:content-type; bh=c73DSR28sypdg+x4I+7u7SnpoIT+SlohxYj8lgBVeaU=; b=bOId7Umex/L/pD+OTyid7fodNy7/GzCj6V6zTYgHsI0dlM1X+gW+eFd1V4mycbGA62 L7DQcAFxkDKSZwXsgKDzbipesbgiDdz/hKMn4xXeT9W6xH+pQdCJmnduMFYDdRGPo0Ma EcZ9POhb1TVeQEjS8o0JQvlOpkLo6gNlGeSm3WAAalTgihuG2NwH2VODvfL80513mFif JCT3YKdwzn67qz43MRAUp9xRfpHgk0yxKaZezuc6kusboe3c85QKjOqp09u8WqfqwXDI LX0sxmIECJXpsbvxv5pVIVUhhmhRO8CqLKeWRkThG74ewltUg/iGyJfWsb8E0WppVaut UucA== X-Received: by 10.180.228.100 with SMTP id sh4mr4473704wic.40.1400232315262; Fri, 16 May 2014 02:25:15 -0700 (PDT) MIME-Version: 1.0 Sender: olaf.lenz@gmail.com Received: by 10.194.33.233 with HTTP; Fri, 16 May 2014 02:24:55 -0700 (PDT) In-Reply-To: <5375D2AB.50301@icp.uni-stuttgart.de> References: <5375D2AB.50301@icp.uni-stuttgart.de> From: Olaf Lenz Date: Fri, 16 May 2014 11:24:55 +0200 X-Google-Sender-Auth: 4gfL1JhCTtTtkzKCmuqcGxMCiNA Message-ID: To: Florian Fahrenberger Content-Type: multipart/alternative; boundary=001a1135e81ac11bb904f980fd0b X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2a00:1450:400c:c03::22b Cc: ESPResSo maintainers Subject: Re: [Espressomd-maintainer] Citable Code on Github... X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Fri, 16 May 2014 09:25:19 -0000 --001a1135e81ac11bb904f980fd0b Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: quoted-printable Interestingly enough, it is also possible to get free private repositories for scientists. So, if anybody has code that should not be public straight away, that might be a way to got. BTW, when the code has become "citable", that doesn't mean that the "scientific value" of the code grows. Even now one can cite a URL. Olaf 2014-05-16 10:56 GMT+02:00 Florian Fahrenberger < Florian.Fahrenberger@icp.uni-stuttgart.de>: > Hi, maintainers! > > I have just been told by Sela (do you remember him?) that Github is > working hard to make scientific code citable in an easier and more > straightforward way: > https://github.com/blog/1840-improving-github-for-science > > Might be interesting for ESPResSo? Just a thought... > > Floh > > -- > Florian Fahrenberger, Institut f=C3=BCr Computerphysik > Allmandring 3, 70569 Stuttgart > Tel: +49-(0)711/685-63594 > Fax: +49-(0)711/685-63658 > > _______________________________________________ > Espressomd-maintainer mailing list > Espressomd-maintainer@nongnu.org > https://lists.nongnu.org/mailman/listinfo/espressomd-maintainer > > --=20 Dr. rer. nat. Olaf Lenz Institut f=C3=BCr Computerphysik, Allmandring 3, D-70569 Stuttgart Phone: +49-711-685-63607 --001a1135e81ac11bb904f980fd0b Content-Type: text/html; charset=UTF-8 Content-Transfer-Encoding: quoted-printable
Interestingly enough, it is also possible to get free priv= ate repositories for scientists. So, if anybody has code that should not be= public straight away, that might be a way to got.

BTW, = when the code has become "citable", that doesn't mean that th= e "scientific value" of the code grows. Even now one can cite a U= RL.

Olaf


2014-05-16 10:56 GMT+02:00 Florian Fahrenberger <Florian.Fahrenberger@icp.uni-stuttgart.de>:
Hi, maintainers!

I have just been told by Sela (do you remember him?) that Github is
working hard to make scientific code citable in an easier and more
straightforward way:
https://github.com/blog/1840-improving-github-for-science<= br>
Might be interesting for ESPResSo? Just a thought...

Floh

--
Florian Fahrenberger, Institut f=C3=BCr Computerphysik
Allmandring 3, 70569 Stuttgart
Tel: = +49-(0)711/685-63594
Fax: = +49-(0)711/685-63658

_______________________________________________
Espressomd-maintainer mailing list
Espressomd-maintainer@n= ongnu.org
https://lists.nongnu.org/mailman/listinfo/espressomd-mai= ntainer




--
Dr. rer. nat. Olaf Lenz
Institut f=C3= =BCr Computerphysik, Allmandring 3, D-70569 Stuttgart
Phone: +49-= 711-685-63607
--001a1135e81ac11bb904f980fd0b-- From MAILER-DAEMON Fri May 16 13:25:01 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WlLsT-0001WV-J8 for mharc-espressomd-maintainer@gnu.org; Fri, 16 May 2014 13:25:01 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:59006) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WlLsM-0001OW-Qh for espressomd-maintainer@nongnu.org; Fri, 16 May 2014 13:25:00 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WlLsI-00079J-4H for espressomd-maintainer@nongnu.org; Fri, 16 May 2014 13:24:54 -0400 Received: from medousa-out.rus.uni-stuttgart.de ([2001:7c0:2041:25::1:4]:38109 helo=medousa.rus.uni-stuttgart.de) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WlLsH-00077d-QH for espressomd-maintainer@nongnu.org; Fri, 16 May 2014 13:24:50 -0400 Received: from localhost (localhost [127.0.0.1]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP id 0AFA537F1D for ; Fri, 16 May 2014 19:24:39 +0200 (CEST) X-Virus-Scanned: by amavisd-new at medousa.rus.uni-stuttgart.de Received: from medousa.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (medousa.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id NIqvITQ43Bca for ; Fri, 16 May 2014 19:23:50 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (anoa.icp.uni-stuttgart.de [129.69.120.76]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Fri, 16 May 2014 19:23:50 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 7E07BA40EE for ; Fri, 16 May 2014 19:23:50 +0200 (CEST) Date: Fri, 16 May 2014 19:23:49 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1984793237.0.1400261030270.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-python-interface X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2001:7c0:2041:25::1:4 Subject: [Espressomd-maintainer] Build failed in Jenkins: master-python-interface #108 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Fri, 16 May 2014 17:25:00 -0000 See Changes: [Rudolf Weeber] Python: Doc strings and type checking [Rudolf Weeber] More work on python access to particle properties [Rudolf Weeber] Python: Better error messages when setting particle properties [Rudolf Weeber] Python: Made more ifdef-features available in python [Rudolf Weeber] python: Unit test for setting/getting basic particle properties [Rudolf Weeber] python: Allow integres as input when setting particle properties which are of type float [Rudolf Weeber] python: Particle data structure [Rudolf Weeber] More particle properties: rotation stuf, mass + unit test [Rudolf Weeber] Python: Doc strings and type checking [Rudolf Weeber] More work on python access to particle properties [Rudolf Weeber] Python: Better error messages when setting particle properties [Rudolf Weeber] Python: Made more ifdef-features available in python [Rudolf Weeber] python: Unit test for setting/getting basic particle properties [Rudolf Weeber] python: Allow integres as input when setting particle properties which are of type float [Rudolf Weeber] python: Particle data structure [Rudolf Weeber] More particle properties: rotation stuf, mass + unit test [Rudolf Weeber] Python: More particle properties. dipoles, director, virtual, vs_relative, charge + unit test [Rudolf Weeber] Python: Handling of particle bonds [Rudolf Weeber] Remove compile time switches in the bonded_ia_parameters data structure to avoid complexity in python interface [Rudolf Weeber] Python: Make the bonded_ia_parameters data structure available in cython [Rudolf Weeber] Python: More work on bonded ia [Rudolf Weeber] Python: Make cuda compile time switch available [Rudolf Weeber] Split the sub-structs of the typedef of Bonded_ia_params in preparation for python interface of bonded ia [Rudolf Weeber] Python: Wrong c imports in lb and cuda [Rudolf Weeber] Python: More corrected imports from cpp [Rudolf Weeber] Python: Synchronized bonded ia data structures with cpp [Rudolf Weeber] Python: fix cuda and lb compilation and initialization [Rudolf Weeber] Python: Bonded ia incl. testcase [Rudolf Weeber] Python: Bonded ia fixes + test case [Rudolf Weeber] Python: Rework non-bonded interactions [Rudolf Weeber] Python: non-bonded ia, fixes and unit test [Rudolf Weeber] Python: Interactions fix [Rudolf Weeber] Revert "Manually build .la-files to avoid the .cpp-files to be added to the distribution." [Rudolf Weeber] Python: Updated unit tests [Rudolf Weeber] Python: Updated nonbonded ia [Rudolf Weeber] Python: Rename the interaction_data module to interactions [Rudolf Weeber] Python: Remove broken direct access to lj cap_radius [Rudolf Weeber] Python: Set/get global forcecap + unit test [Rudolf Weeber] Python: delete unnecessary file [Rudolf Weeber] Python: LennardJones interaction - handle shift="auto" [Rudolf Weeber] Python: Update lj_liquid.py sample script [Olaf Lenz] Doc. ------------------------------------------ [...truncated 298 lines...] config.status: creating doc/ug/Makefile config.status: creating doc/dg/Makefile config.status: creating doc/doxygen/Makefile config.status: creating doc/tutorials/Makefile config.status: creating doc/tutorials/01-lennard_jones/Makefile config.status: creating doc/tutorials/02-charged_system/Makefile config.status: creating doc/tutorials/03-object_in_fluid/Makefile config.status: creating doc/latexit.sh config.status: creating testsuite/runtest.sh config.status: creating tools/es_mpiexec config.status: creating src/acconfig.hpp config.status: executing depfiles commands config.status: executing libtool commands config.status: executing myconfig-sample.hpp commands **************************************************************** * Configuration summary * **************************************************************** platform detected = x86_64-unknown-linux-gnu package version = 3.2.0-897-gdf2a884 development sources = yes Compiler -------- compiler = mpic++ linker = /usr/x86_64-suse-linux/bin/ld -m elf_x86_64 c++ compiler flags = -Wall -O5 c++ preprocessor flags = linker flags = -L/usr/local/cuda/lib64 libraries = -lcufft -lcudart -lfftw3 -lm using debug flags = using profiling flags = Libraries --------- FFTW = yes efence = no Cuda ---- CUDA compiler = /usr/local/cuda/bin/nvcc CUDA flags = --ptxas-options=-v -gencode arch=compute_20,code=compute_20 Tcl/Tk ------ Tcl version = none Tk version = none Python ------ python = /usr/local/bin/python build python interface = yes preprocessor flags = -I/usr/local/stow/epd-7.3.2/lib/epd-7.3.2/include/python2.7 -I/usr/local/stow/epd-7.3.2/lib/epd-7.3.2/include/python2.7 -fno-strict-aliasing -g -O2 -DNDEBUG -O2 -I/usr/local/stow/epd-7.3.2/lib/epd-7.3.2/lib/python2.7/site-packages/numpy/core/include linker flags = -lpthread -ldl -lutil -lm -lpython2.7 -Xlinker -export-dynamic extra flags = -lpthread -ldl -lutil -lm -lpython2.7 extra linker flags = Other settings -------------- config = myconfig.hpp installation prefix = /home/jenkins/Espresso number of test tasks = 8 mympiexec = mpiexec = /usr/lib64/mpi/gcc/openmpi/bin/mpiexec pdflatex = /usr/bin/pdflatex makeindex = /usr/bin/makeindex bibtex = /usr/bin/bibtex doxygen = /usr/bin/doxygen dot = /usr/bin/dot END CONFIGURE + maintainer/jenkins/build.sh srcdir= builddir= insource=true START BUILD myconfig=default build_procs=1 Using default myconfig. >make -j 1 Making all in config make[1]: Entering directory ` make[1]: Nothing to be done for `all'. make[1]: Leaving directory ` Making all in src make[1]: Entering directory ` GEN myconfig-final.hpp <= ./myconfig-default.hpp GEN config-features.hpp make all-recursive make[2]: Entering directory ` Making all in . make[3]: Entering directory ` CXX config-features.lo CXX cells.lo CXX collision.lo CXX communication.lo CXX comfixed.lo CXX comforce.lo CXX constraint.lo CXX cuda_interface.lo CXX debug.lo CXX domain_decomposition.lo CXX electrokinetics_pdb_parse.lo CXX energy.lo CXX errorhandling.lo CXX fft.lo CXX fft-common.lo CXX fft-dipolar.lo CXX forcecap.lo CXX forces.lo CXX galilei.lo CXX ghosts.lo CXX global.lo CXX grid.lo CXX halo.lo CXX iccp3m.lo CXX imd.lo CXX initialize.lo CXX integrate.lo CXX interaction_data.lo CXX lattice.lo CXX layered.lo CXX lb.lo CXX lb-boundaries.lo CXX lbgpu.lo CXX metadynamics.lo CXX modes.lo CXX molforces.lo CXX mol_cut.lo CXX nemd.lo CXX nsquare.lo CXX particle_data.lo CXX polymer.lo CXX pressure.lo CXX random.lo CXX rattle.lo CXX reaction.lo CXX rotation.lo CXX specfunc.lo CXX statistics.lo CXX statistics_chain.lo CXX statistics_cluster.lo CXX statistics_correlation.lo CXX statistics_fluid.lo CXX statistics_molecule.lo CXX statistics_observable.lo CXX statistics_wallstuff.lo CXX thermostat.lo CXX topology.lo CXX tuning.lo CXX uwerr.lo CXX verlet.lo CXX virtual_sites.lo CXX virtual_sites_com.lo CXX virtual_sites_relative.lo CXX vmdsock.lo CXX ghmc.lo CXX EspressoSystemInterface.lo CXX bmhtf-nacl.lo CXX buckingham.lo CXX dpd.lo CXX gaussian.lo CXX gb.lo CXX hat.lo CXX hertzian.lo CXX lj.lo CXX ljangle.lo CXX ljcos.lo CXX ljcos2.lo CXX ljgen.lo CXX morse.lo CXX soft_sphere.lo CXX steppot.lo CXX tab.lo CXX tunable_slip.lo CXX angle.lo CXX angle_harmonic.lo CXX angle_cosine.lo CXX angle_cossquare.lo CXX angledist.lo CXX dihedral.lo CXX endangledist.lo CXX fene.lo CXX harmonic.lo CXX overlap.lo CXX subt_lj.lo CXX object-in-fluid/area_force_local.lo CXX object-in-fluid/area_force_global.lo CXX object-in-fluid/bending_force.lo CXX object-in-fluid/stretching_force.lo CXX object-in-fluid/stretchlin_force.lo CXX object-in-fluid/volume_force.lo CXX debye_hueckel.lo CXX elc.lo CXX magnetic_non_p3m_methods.lo CXX mdlc_correction.lo CXX maggs.lo CXX mmm1d.lo CXX mmm2d.lo CXX mmm-common.lo CXX p3m.lo CXX p3m-common.lo CXX p3m-dipolar.lo CXX reaction_field.lo NVCC cuda_init_cuda.lo NVCC cuda_common_cuda.lo NVCC electrokinetics_cuda.lo NVCC lbgpu_cuda.lo NVCC p3m_gpu_cuda.lo NVCC EspressoSystemInterface_cuda.lo NVCC HarmonicForce.lo GEN config-version.cpp CXX config-version.lo CXXLD libEspresso.la make[3]: Leaving directory ` Making all in python make[3]: Entering directory ` Making all in espresso make[4]: Entering directory ` GEN gen_pxiconfig.cpp Reading definitions from ../../../src/features.def... Done. Writing gen_pxiconfig.cpp... Done. CXX gen_pxiconfig.o CXXLD gen_pxiconfig GEN myconfig.pxi make all-am make[5]: Entering directory ` GEN python-all CYTHON System.cpp CXXLD System.la libtool: link: `System.lo' is not a valid libtool object make[5]: *** [System.la] Error 1 make[5]: Leaving directory ` make[4]: *** [all] Error 2 make[4]: Leaving directory ` make[3]: *** [all-recursive] Error 1 make[3]: Leaving directory ` make[2]: *** [all-recursive] Error 1 make[2]: Leaving directory ` make[1]: *** [all] Error 2 make[1]: Leaving directory ` make: *** [all-recursive] Error 1 + exit 1 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE Archiving artifacts From MAILER-DAEMON Fri May 16 13:28:32 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WlLvs-0002s6-Gn for mharc-espressomd-maintainer@gnu.org; Fri, 16 May 2014 13:28:32 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:59758) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WlLvl-0002mG-Bd for espressomd-maintainer@nongnu.org; Fri, 16 May 2014 13:28:30 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WlLvf-0000Bn-6Z for espressomd-maintainer@nongnu.org; Fri, 16 May 2014 13:28:25 -0400 Received: from hydra.rus.uni-stuttgart.de ([129.69.192.3]:34453) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WlLve-0000Ap-TK for espressomd-maintainer@nongnu.org; Fri, 16 May 2014 13:28:19 -0400 Received: from localhost (localhost [127.0.0.1]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP id 01A1312CC3F for ; Fri, 16 May 2014 19:28:18 +0200 (CEST) X-Virus-Scanned: by amavisd-new at hydra.rus.uni-stuttgart.de Received: from hydra.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (hydra.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id 8HvQtXRMph30 for ; Fri, 16 May 2014 19:28:12 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (ica1.uni-stuttgart.de [129.69.120.76]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Fri, 16 May 2014 19:28:12 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id AB92CA40EE for ; Fri, 16 May 2014 19:28:12 +0200 (CEST) Date: Fri, 16 May 2014 19:28:12 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <226810323.1.1400261292598.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-build-check X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.3 Subject: [Espressomd-maintainer] Build failed in Jenkins: master-build-check #162 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Fri, 16 May 2014 17:28:31 -0000 See Changes: [Florian Weik] extended lattic struct for anisotropy. [Florian Weik] extended lattice! [Florian Weik] ... [Florian Weik] ... [Stefan Kesselheim] new code for the lattice and the potential! [Stefan Kesselheim] added new slitpore constraint [Stefan Kesselheim] minor improvments to different dielectric things [Stefan Kesselheim] minor improvments to different dielectric things [Stefan Kesselheim] fixed small error [Stefan Kesselheim] added iccp3m subcommand no_iterations [Stefan Kesselheim] added a parameter to the dielectric pore [Stefan Kesselheim] fixed bug in iccp3m [Stefan Kesselheim] changed the structure of observables [Stefan Kesselheim] fixed missing memory allocation [Stefan Kesselheim] added documentation and other stuff [Stefan Kesselheim] mostly complete implementation of the ext. tab. field [Stefan Kesselheim] little fix in dielectrics [Stefan Kesselheim] added observable autoupdate feature [Stefan Kesselheim] added energy calculation for external potentials [Stefan Kesselheim] small fixes to external potential [Stefan Kesselheim] small fixes to external potential [Stefan Kesselheim] added testcase for external potential [Stefan Kesselheim] small fix in memory management [Stefan Kesselheim] small correction so that LB works with the lattice implementation [Stefan Kesselheim] small fix to iccp3m and pore dielectric [Stefan Kesselheim] parallelized observable_lb_radial_velocity_profile [Stefan Kesselheim] added charge density argument for dielectric pore [Stefan Kesselheim] added missing charge density broadcast to iccp3m [Stefan Kesselheim] separated fluid interpolation from force calculation [Stefan Kesselheim] ported lb_radial_velocity_profile to gpu [Stefan Kesselheim] added out radius for pore constraint an lbboundary [Stefan Kesselheim] added force to velocity interpolation in lbgpu [Stefan Kesselheim] added guards for lb_radial_profile [Stefan Kesselheim] fixed bug regarding outer radius of pore [Stefan Kesselheim] fixed bug in iccp3m [Stefan Kesselheim] added NEWS for slitpore constraint and pore constraint [Stefan Kesselheim] still merging supercaps and c++ master [Stefan Kesselheim] added lost part of dielectric slitpore implementation [Stefan Kesselheim] fixing errors resulting from the merge [Stefan Kesselheim] added lost source file [Stefan Kesselheim] fixed bug in iccp3m. Again. [Stefan Kesselheim] wrote c++ version of normal parsers for iccp3m. [Stefan Kesselheim] fixed little error in include [Stefan Kesselheim] added tk8.6 support [Stefan Kesselheim] fixed includes for tk.h [Stefan Kesselheim] fixed iccp3m normals parser (with c++) [Stefan Kesselheim] generic appending of complex datatypes to TCL result [Stefan Kesselheim] small fix to external potential [Stefan Kesselheim] small fixes to the generic Tcl_Append [Stefan Kesselheim] moved the Tcl_Append functions to a file with a better name [Stefan Kesselheim] added slitpore constraint and dielectric documentation [Stefan Kesselheim] small fix to lattice and external potential [Stefan Kesselheim] allowed for use of interdpd _with_ other thermostats [Stefan Kesselheim] small fixes to correlation and observable [Stefan Kesselheim] changed to displacement-based radial flux profile [Stefan Kesselheim] added missing iccp3m sigma broadcast [Stefan Kesselheim] added a flag to disable DPD being switched off for fixed particles [Stefan Kesselheim] added news ------------------------------------------ [...truncated 224 lines...] checking for rint... yes checking for select... yes checking for socket... yes checking for sqrt... yes **************************************************************** * Checking for required tools and libraries * **************************************************************** checking for libtcl8.6... no checking for libtcl8.5... yes checking for tcl.h... yes checking whether to use FFTW... yes checking for library containing fftw_plan_many_dft... -lfftw3 checking fftw3.h usability... yes checking fftw3.h presence... yes checking for fftw3.h... yes checking whether to use CUDA... yes checking for nvcc... /usr/local/cuda/bin/nvcc checking if /usr/local/cuda/bin/nvcc supports -c -o file.o... no checking if /usr/local/cuda/bin/nvcc supports -c -o file.o... (cached) no checking whether the /usr/local/cuda/bin/nvcc linker (/usr/x86_64-suse-linux/bin/ld -m elf_x86_64) supports shared libraries... yes checking how to hardcode library paths into programs... immediate checking for libcudart... yes checking for libcufft... yes checking whether CUDA compiles... yes checking whether CUDA runs... yes **************************************************************** * Checking for Python * **************************************************************** checking for a Python interpreter with version >= 2.5... python checking for python... /usr/local/bin/python checking for python version... 2.7 checking for python platform... linux2 checking for python script directory... ${prefix}/lib/python2.7/site-packages checking for python extension module directory... ${exec_prefix}/lib/python2.7/site-packages checking whether python -B works... yes checking whether to build the python interface... no **************************************************************** * Checking for Tcl/Tk * **************************************************************** checking whether to build the Tcl interface... yes checking for libtcl8.6... no checking for tcl.h... yes checking whether to use Tk... yes **************************************************************** * Other settings * **************************************************************** checking whether to use efence... no checking whether the variable MYCONFIG is set... no checking the number of available CPUs... 8 **************************************************************** * Creating output files * **************************************************************** checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating config/Makefile config.status: creating config/myconfig-sample-header.hpp config.status: creating src/Makefile config.status: creating src/tcl/Makefile config.status: creating src/python/Makefile config.status: creating src/python/espresso/Makefile config.status: creating tools/Makefile config.status: creating scripts/Makefile config.status: creating testsuite/Makefile config.status: creating doc/Makefile config.status: creating doc/logo/Makefile config.status: creating doc/ug/Makefile config.status: creating doc/dg/Makefile config.status: creating doc/doxygen/Makefile config.status: creating doc/tutorials/Makefile config.status: creating doc/tutorials/01-lennard_jones/Makefile config.status: creating doc/tutorials/02-charged_system/Makefile config.status: creating doc/tutorials/03-object_in_fluid/Makefile config.status: creating doc/latexit.sh config.status: creating testsuite/runtest.sh config.status: creating tools/es_mpiexec config.status: creating src/acconfig.hpp config.status: executing depfiles commands config.status: executing libtool commands config.status: executing myconfig-sample.hpp commands **************************************************************** * Configuration summary * **************************************************************** platform detected = x86_64-unknown-linux-gnu package version = 3.2.0-973-ga85f205 development sources = yes Compiler -------- compiler = mpic++ linker = /usr/x86_64-suse-linux/bin/ld -m elf_x86_64 c++ compiler flags = -Wall -O5 c++ preprocessor flags = linker flags = -L/usr/local/cuda/lib64 libraries = -lcufft -lcudart -lfftw3 -ltcl8.5 -lm using debug flags = using profiling flags = Libraries --------- FFTW = yes efence = no Cuda ---- CUDA compiler = /usr/local/cuda/bin/nvcc CUDA flags = --ptxas-options=-v -gencode arch=compute_20,code=compute_20 Tcl/Tk ------ Tcl version = tcl8.5 Tk version = none Python ------ python = /usr/local/bin/python -B build python interface = no Other settings -------------- config = myconfig.hpp installation prefix = /home/jenkins/Espresso number of test tasks = 8 mympiexec = mpiexec = /usr/lib64/mpi/gcc/openmpi/bin/mpiexec pdflatex = /usr/bin/pdflatex makeindex = /usr/bin/makeindex bibtex = /usr/bin/bibtex doxygen = /usr/bin/doxygen dot = /usr/bin/dot Not building Python interface. END CONFIGURE + maintainer/jenkins/build.sh srcdir= builddir= insource=true START BUILD myconfig=maxset build_procs=1 Copying maxset.hpp to >make -j 1 Making all in config make[1]: Entering directory ` make[1]: Nothing to be done for `all'. make[1]: Leaving directory ` Making all in src make[1]: Entering directory ` GEN myconfig-final.hpp <= ../myconfig.hpp GEN config-features.hpp make all-recursive make[2]: Entering directory ` Making all in . make[3]: Entering directory ` CXX config-features.lo CXX cells.lo CXX collision.lo CXX communication.lo communication.cpp: In function 'void mpi_external_potential_broadcast(int)': communication.cpp:2929:31: warning: unused variable 'e' [-Wunused-variable] CXX comfixed.lo CXX comforce.lo CXX constraint.lo CXX cuda_interface.lo CXX debug.lo CXX domain_decomposition.lo CXX electrokinetics_pdb_parse.lo CXX energy.lo CXX external_potential.lo external_potential.cpp: In function 'int lattice_read_file(Lattice*, char*)': external_potential.cpp:176:46: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] CXX errorhandling.lo CXX fft.lo CXX fft-common.lo CXX fft-dipolar.lo CXX forcecap.lo CXX forces.lo CXX galilei.lo CXX ghosts.lo CXX global.lo CXX grid.lo CXX halo.lo CXX iccp3m.lo CXX imd.lo CXX initialize.lo CXX integrate.lo CXX interaction_data.lo CXX lattice.lo lattice.cpp: In function 'void lattice_interpolate_linear_gradient(Lattice*, double*, double*)': lattice.cpp:151:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:156:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:163:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:170:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:177:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:184:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:191:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:198:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:205:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:145:11: warning: unused variable 'w' [-Wunused-variable] lattice.cpp:145:17: warning: unused variable 'wd' [-Wunused-variable] lattice.cpp:146:12: warning: unused variable 'temp_index' [-Wunused-variable] lattice.cpp: In function 'void lattice_interpolate_linear(Lattice*, double*, double*)': lattice.cpp:253:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:260:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:234:12: warning: unused variable 'temp_index' [-Wunused-variable] CXX layered.lo CXX lb.lo lb.cpp: In function 'int lb_lbfluid_print_vtk_boundary(char*)': lb.cpp:598:271: error: invalid operands of types 'double [3]' and 'double' to binary 'operator*' lb.cpp:598:292: error: invalid operands of types 'double [3]' and 'double' to binary 'operator*' lb.cpp:598:313: error: invalid operands of types 'double [3]' and 'double' to binary 'operator*' lb.cpp: In function 'int lb_lbfluid_print_vtk_velocity(char*)': lb.cpp:687:271: error: invalid operands of types 'double [3]' and 'double' to binary 'operator*' lb.cpp:687:292: error: invalid operands of types 'double [3]' and 'double' to binary 'operator*' lb.cpp:687:313: error: invalid operands of types 'double [3]' and 'double' to binary 'operator*' lb.cpp: In function 'int lb_lbfluid_print_boundary(char*)': lb.cpp:734:40: error: invalid operands of types 'double' and 'double [3]' to binary 'operator/' lb.cpp:735:40: error: invalid operands of types 'double' and 'double [3]' to binary 'operator/' lb.cpp:736:40: error: invalid operands of types 'double' and 'double [3]' to binary 'operator/' lb.cpp:743:63: error: invalid operands of types 'double' and 'double [3]' to binary 'operator*' lb.cpp:743:93: error: invalid operands of types 'double' and 'double [3]' to binary 'operator*' lb.cpp:743:123: error: invalid operands of types 'double' and 'double [3]' to binary 'operator*' lb.cpp: In function 'int lb_lbfluid_print_velocity(char*)': lb.cpp:786:40: error: invalid operands of types 'double' and 'double [3]' to binary 'operator/' lb.cpp:787:40: error: invalid operands of types 'double' and 'double [3]' to binary 'operator/' lb.cpp:788:40: error: invalid operands of types 'double' and 'double [3]' to binary 'operator/' lb.cpp:798:69: error: invalid operands of types 'double' and 'double [3]' to binary 'operator*' lb.cpp:798:99: error: invalid operands of types 'double' and 'double [3]' to binary 'operator*' lb.cpp:798:129: error: invalid operands of types 'double' and 'double [3]' to binary 'operator*' lb.cpp: In function 'void calc_particle_lattice_ia()': lb.cpp:2997:53: error: invalid operands of types 'double' and 'double [3]' to binary 'operator*' lb.cpp:2997:102: error: invalid operands of types 'double' and 'double [3]' to binary 'operator*' lb.cpp:2998:56: error: invalid operands of types 'double' and 'double [3]' to binary 'operator*' lb.cpp:2998:105: error: invalid operands of types 'double' and 'double [3]' to binary 'operator*' lb.cpp:2999:56: error: invalid operands of types 'double' and 'double [3]' to binary 'operator*' lb.cpp:2999:105: error: invalid operands of types 'double' and 'double [3]' to binary 'operator*' make[3]: *** [lb.lo] Error 1 make[3]: Leaving directory ` make[2]: *** [all-recursive] Error 1 make[2]: Leaving directory ` make[1]: *** [all] Error 2 make[1]: Leaving directory ` make: *** [all-recursive] Error 1 + exit 1 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE Archiving artifacts From MAILER-DAEMON Fri May 16 13:30:46 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WlLy2-0004Ez-J8 for mharc-espressomd-maintainer@gnu.org; Fri, 16 May 2014 13:30:46 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:60171) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WlLxv-0004CW-OV for espressomd-maintainer@nongnu.org; Fri, 16 May 2014 13:30:44 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WlLxq-00014z-9R for espressomd-maintainer@nongnu.org; Fri, 16 May 2014 13:30:39 -0400 Received: from charon-out.rus.uni-stuttgart.de ([2001:7c0:2041:25::1:1]:38018 helo=charon.rus.uni-stuttgart.de) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WlLxp-00013k-S4 for espressomd-maintainer@nongnu.org; Fri, 16 May 2014 13:30:34 -0400 Received: from localhost (localhost [127.0.0.1]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP id 7C3AD5FF4E for ; Fri, 16 May 2014 19:30:31 +0200 (CEST) X-Virus-Scanned: by amavisd-new at charon.rus.uni-stuttgart.de Received: from charon.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (charon.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id iZWgMs45Be53 for ; Fri, 16 May 2014 19:29:02 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (ica1.uni-stuttgart.de [129.69.120.76]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Fri, 16 May 2014 19:29:02 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 98380A40EE for ; Fri, 16 May 2014 19:29:02 +0200 (CEST) Date: Fri, 16 May 2014 19:29:02 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1313720814.2.1400261342603.JavaMail.jenkins@elk> In-Reply-To: <1984793237.0.1400261030270.JavaMail.jenkins@elk> References: <1984793237.0.1400261030270.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-python-interface X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2001:7c0:2041:25::1:1 Subject: [Espressomd-maintainer] Build failed in Jenkins: master-python-interface #109 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Fri, 16 May 2014 17:30:45 -0000 See Changes: [Florian Weik] extended lattic struct for anisotropy. [Florian Weik] extended lattice! [Florian Weik] ... [Florian Weik] ... [Stefan Kesselheim] new code for the lattice and the potential! [Stefan Kesselheim] added new slitpore constraint [Stefan Kesselheim] minor improvments to different dielectric things [Stefan Kesselheim] minor improvments to different dielectric things [Stefan Kesselheim] fixed small error [Stefan Kesselheim] added iccp3m subcommand no_iterations [Stefan Kesselheim] added a parameter to the dielectric pore [Stefan Kesselheim] fixed bug in iccp3m [Stefan Kesselheim] changed the structure of observables [Stefan Kesselheim] fixed missing memory allocation [Stefan Kesselheim] added documentation and other stuff [Stefan Kesselheim] mostly complete implementation of the ext. tab. field [Stefan Kesselheim] little fix in dielectrics [Stefan Kesselheim] added observable autoupdate feature [Stefan Kesselheim] added energy calculation for external potentials [Stefan Kesselheim] small fixes to external potential [Stefan Kesselheim] small fixes to external potential [Stefan Kesselheim] added testcase for external potential [Stefan Kesselheim] small fix in memory management [Stefan Kesselheim] small correction so that LB works with the lattice implementation [Stefan Kesselheim] small fix to iccp3m and pore dielectric [Stefan Kesselheim] parallelized observable_lb_radial_velocity_profile [Stefan Kesselheim] added charge density argument for dielectric pore [Stefan Kesselheim] added missing charge density broadcast to iccp3m [Stefan Kesselheim] separated fluid interpolation from force calculation [Stefan Kesselheim] ported lb_radial_velocity_profile to gpu [Stefan Kesselheim] added out radius for pore constraint an lbboundary [Stefan Kesselheim] added force to velocity interpolation in lbgpu [Stefan Kesselheim] added guards for lb_radial_profile [Stefan Kesselheim] fixed bug regarding outer radius of pore [Stefan Kesselheim] fixed bug in iccp3m [Stefan Kesselheim] added NEWS for slitpore constraint and pore constraint [Stefan Kesselheim] still merging supercaps and c++ master [Stefan Kesselheim] added lost part of dielectric slitpore implementation [Stefan Kesselheim] fixing errors resulting from the merge [Stefan Kesselheim] added lost source file [Stefan Kesselheim] fixed bug in iccp3m. Again. [Stefan Kesselheim] wrote c++ version of normal parsers for iccp3m. [Stefan Kesselheim] fixed little error in include [Stefan Kesselheim] added tk8.6 support [Stefan Kesselheim] fixed includes for tk.h [Stefan Kesselheim] fixed iccp3m normals parser (with c++) [Stefan Kesselheim] generic appending of complex datatypes to TCL result [Stefan Kesselheim] small fix to external potential [Stefan Kesselheim] small fixes to the generic Tcl_Append [Stefan Kesselheim] moved the Tcl_Append functions to a file with a better name [Stefan Kesselheim] added slitpore constraint and dielectric documentation [Stefan Kesselheim] small fix to lattice and external potential [Stefan Kesselheim] allowed for use of interdpd _with_ other thermostats [Stefan Kesselheim] small fixes to correlation and observable [Stefan Kesselheim] changed to displacement-based radial flux profile [Stefan Kesselheim] added missing iccp3m sigma broadcast [Stefan Kesselheim] added a flag to disable DPD being switched off for fixed particles [Stefan Kesselheim] added news ------------------------------------------ [...truncated 343 lines...] ---- CUDA compiler = /usr/local/cuda/bin/nvcc CUDA flags = --ptxas-options=-v -gencode arch=compute_20,code=compute_20 Tcl/Tk ------ Tcl version = none Tk version = none Python ------ python = /usr/local/bin/python build python interface = yes preprocessor flags = -I/usr/local/stow/epd-7.3.2/lib/epd-7.3.2/include/python2.7 -I/usr/local/stow/epd-7.3.2/lib/epd-7.3.2/include/python2.7 -fno-strict-aliasing -g -O2 -DNDEBUG -O2 -I/usr/local/stow/epd-7.3.2/lib/epd-7.3.2/lib/python2.7/site-packages/numpy/core/include linker flags = -lpthread -ldl -lutil -lm -lpython2.7 -Xlinker -export-dynamic extra flags = -lpthread -ldl -lutil -lm -lpython2.7 extra linker flags = Other settings -------------- config = myconfig.hpp installation prefix = /home/jenkins/Espresso number of test tasks = 8 mympiexec = mpiexec = /usr/lib64/mpi/gcc/openmpi/bin/mpiexec pdflatex = /usr/bin/pdflatex makeindex = /usr/bin/makeindex bibtex = /usr/bin/bibtex doxygen = /usr/bin/doxygen dot = /usr/bin/dot END CONFIGURE + maintainer/jenkins/build.sh srcdir= builddir= insource=true START BUILD myconfig=default build_procs=1 Using default myconfig. >make -j 1 Making all in config make[1]: Entering directory ` make[1]: Nothing to be done for `all'. make[1]: Leaving directory ` Making all in src make[1]: Entering directory ` GEN myconfig-final.hpp <= ./myconfig-default.hpp GEN config-features.hpp make all-recursive make[2]: Entering directory ` Making all in . make[3]: Entering directory ` CXX config-features.lo CXX cells.lo CXX collision.lo CXX communication.lo communication.cpp: In function 'void mpi_external_potential_broadcast(int)': communication.cpp:2929:31: warning: unused variable 'e' [-Wunused-variable] CXX comfixed.lo CXX comforce.lo CXX constraint.lo CXX cuda_interface.lo CXX debug.lo CXX domain_decomposition.lo CXX electrokinetics_pdb_parse.lo CXX energy.lo CXX external_potential.lo external_potential.cpp: In function 'int lattice_read_file(Lattice*, char*)': external_potential.cpp:176:46: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] CXX errorhandling.lo CXX fft.lo CXX fft-common.lo CXX fft-dipolar.lo CXX forcecap.lo CXX forces.lo CXX galilei.lo CXX ghosts.lo CXX global.lo CXX grid.lo CXX halo.lo CXX iccp3m.lo CXX imd.lo CXX initialize.lo CXX integrate.lo CXX interaction_data.lo CXX lattice.lo lattice.cpp: In function 'void lattice_interpolate_linear_gradient(Lattice*, double*, double*)': lattice.cpp:151:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:156:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:163:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:170:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:177:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:184:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:191:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:198:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:205:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:145:11: warning: unused variable 'w' [-Wunused-variable] lattice.cpp:145:17: warning: unused variable 'wd' [-Wunused-variable] lattice.cpp:146:12: warning: unused variable 'temp_index' [-Wunused-variable] lattice.cpp: In function 'void lattice_interpolate_linear(Lattice*, double*, double*)': lattice.cpp:253:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:260:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:234:12: warning: unused variable 'temp_index' [-Wunused-variable] CXX layered.lo CXX lb.lo CXX lb-boundaries.lo CXX lbgpu.lo CXX metadynamics.lo CXX modes.lo CXX molforces.lo CXX mol_cut.lo CXX nemd.lo CXX nsquare.lo CXX particle_data.lo CXX polymer.lo CXX pressure.lo CXX random.lo CXX rattle.lo CXX reaction.lo CXX rotation.lo CXX specfunc.lo CXX statistics.lo CXX statistics_chain.lo CXX statistics_cluster.lo CXX statistics_correlation.lo CXX statistics_fluid.lo CXX statistics_molecule.lo CXX statistics_observable.lo statistics_observable.cpp: In function 'int observable_calc_radial_density_profile(observable*)': statistics_observable.cpp:629:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_radial_flux_density_profile(observable*)': statistics_observable.cpp:681:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_flux_density_profile(observable*)': statistics_observable.cpp:763:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_particle_positions(observable*)': statistics_observable.cpp:799:16: warning: unused variable 'i' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_calc_particle_forces(observable*)': statistics_observable.cpp:819:16: warning: unused variable 'i' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_reset_average(observable*)': statistics_observable.cpp:883:9: warning: unused variable 'error' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_calculate(observable*)': statistics_observable.cpp:41:10: warning: 'temp' may be used uninitialized in this function [-Wmaybe-uninitialized] statistics_observable.cpp: In function 'int observable_update(observable*)': statistics_observable.cpp:49:10: warning: 'temp' may be used uninitialized in this function [-Wmaybe-uninitialized] CXX statistics_wallstuff.lo CXX thermostat.lo CXX topology.lo CXX tuning.lo CXX uwerr.lo CXX verlet.lo CXX virtual_sites.lo CXX virtual_sites_com.lo CXX virtual_sites_relative.lo CXX vmdsock.lo CXX ghmc.lo CXX EspressoSystemInterface.lo CXX bmhtf-nacl.lo CXX buckingham.lo CXX dpd.lo CXX gaussian.lo CXX gb.lo CXX hat.lo CXX hertzian.lo CXX lj.lo CXX ljangle.lo CXX ljcos.lo CXX ljcos2.lo CXX ljgen.lo CXX morse.lo CXX soft_sphere.lo CXX steppot.lo CXX tab.lo CXX tunable_slip.lo CXX angle.lo CXX angle_harmonic.lo CXX angle_cosine.lo CXX angle_cossquare.lo CXX angledist.lo CXX dihedral.lo CXX endangledist.lo CXX fene.lo CXX harmonic.lo CXX overlap.lo CXX subt_lj.lo CXX object-in-fluid/area_force_local.lo CXX object-in-fluid/area_force_global.lo CXX object-in-fluid/bending_force.lo CXX object-in-fluid/stretching_force.lo CXX object-in-fluid/stretchlin_force.lo CXX object-in-fluid/volume_force.lo CXX debye_hueckel.lo CXX elc.lo CXX magnetic_non_p3m_methods.lo CXX mdlc_correction.lo CXX maggs.lo CXX mmm1d.lo CXX mmm2d.lo CXX mmm-common.lo CXX p3m.lo CXX p3m-common.lo CXX p3m-dipolar.lo CXX reaction_field.lo NVCC cuda_init_cuda.lo NVCC cuda_common_cuda.lo NVCC electrokinetics_cuda.lo NVCC lbgpu_cuda.lo NVCC p3m_gpu_cuda.lo NVCC EspressoSystemInterface_cuda.lo NVCC HarmonicForce.lo GEN config-version.cpp CXX config-version.lo CXXLD libEspresso.la make[3]: Leaving directory ` Making all in python make[3]: Entering directory ` Making all in espresso make[4]: Entering directory ` GEN gen_pxiconfig.cpp Reading definitions from ../../../src/features.def... Done. Writing gen_pxiconfig.cpp... Done. CXX gen_pxiconfig.o CXXLD gen_pxiconfig GEN myconfig.pxi make all-am make[5]: Entering directory ` GEN python-all CYTHON System.cpp CXXLD System.la libtool: link: `System.lo' is not a valid libtool object make[5]: *** [System.la] Error 1 make[5]: Leaving directory ` make[4]: *** [all] Error 2 make[4]: Leaving directory ` make[3]: *** [all-recursive] Error 1 make[3]: Leaving directory ` make[2]: *** [all-recursive] Error 1 make[2]: Leaving directory ` make[1]: *** [all] Error 2 make[1]: Leaving directory ` make: *** [all-recursive] Error 1 + exit 1 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE Archiving artifacts From MAILER-DAEMON Fri May 16 14:18:53 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WlMib-0005xz-UI for mharc-espressomd-maintainer@gnu.org; Fri, 16 May 2014 14:18:53 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:42694) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WlMiV-0005xe-FH for espressomd-maintainer@nongnu.org; Fri, 16 May 2014 14:18:52 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WlMiQ-0000lW-G7 for espressomd-maintainer@nongnu.org; Fri, 16 May 2014 14:18:47 -0400 Received: from hydra.rus.uni-stuttgart.de ([129.69.192.3]:36810) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WlMiQ-0000lE-6j for espressomd-maintainer@nongnu.org; Fri, 16 May 2014 14:18:42 -0400 Received: from localhost (localhost [127.0.0.1]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP id 56F9512CBF0 for ; Fri, 16 May 2014 20:18:40 +0200 (CEST) X-Virus-Scanned: by amavisd-new at hydra.rus.uni-stuttgart.de Received: from hydra.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (hydra.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id onK1A78BKA8T for ; Fri, 16 May 2014 20:18:35 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (icp.uni-stuttgart.de [129.69.120.76]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Fri, 16 May 2014 20:18:35 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id B3F74A40EE for ; Fri, 16 May 2014 20:18:35 +0200 (CEST) Date: Fri, 16 May 2014 20:18:35 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1567086138.3.1400264315703.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-fetch-bootstrap X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.3 Subject: [Espressomd-maintainer] Build failed in Jenkins: master-fetch-bootstrap #155 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Fri, 16 May 2014 18:18:52 -0000 See Changes: [Olaf Lenz] Merged configure.ac. [Olaf Lenz] Some more Python improvements. ------------------------------------------ Started by GitHub push by olenz Building remotely on cip13 in workspace > /usr/bin/git rev-parse --is-inside-work-tree Fetching changes from the remote Git repository > /usr/bin/git config remote.origin.url git://github.com/espressomd/espresso.git Fetching upstream changes from git://github.com/espressomd/espresso.git > /usr/bin/git --version > /usr/bin/git fetch --tags --progress git://github.com/espressomd/espresso.git +refs/heads/master:refs/remotes/origin/master > /usr/bin/git rev-parse origin/master^{commit} Checking out Revision a61fa00405f6f452b903d1ee087ee97345cd1206 (origin/master) > /usr/bin/git config core.sparsecheckout > /usr/bin/git checkout -f a61fa00405f6f452b903d1ee087ee97345cd1206 > /usr/bin/git branch -a > /usr/bin/git rev-parse master^{commit} > /usr/bin/git rev-parse remotes/origin/3.0^{commit} > /usr/bin/git rev-parse remotes/origin/3.1^{commit} > /usr/bin/git rev-parse remotes/origin/3.2^{commit} > /usr/bin/git rev-parse remotes/origin/cmake^{commit} > /usr/bin/git rev-parse remotes/origin/cpp^{commit} > /usr/bin/git rev-parse remotes/origin/cython^{commit} > /usr/bin/git rev-parse remotes/origin/master^{commit} > /usr/bin/git branch -D master > /usr/bin/git checkout -b master a61fa00405f6f452b903d1ee087ee97345cd1206 > /usr/bin/git rev-list a85f20582aa0c2c56cf42ec69165858c4445d1bc Cleaning workspace > /usr/bin/git rev-parse --verify HEAD Resetting working tree > /usr/bin/git reset --hard > /usr/bin/git clean -fdx [master-fetch-bootstrap] $ /bin/bash -xe /tmp/hudson5988422332327732188.sh + maintainer/jenkins/bootstrap.sh 4997 (process ID) old priority 0, new priority 5 srcdir= builddir= insource=true START BOOTSTRAP autoreconf: Entering directory `.' autoreconf: configure.ac: not using Gettext autoreconf: running: aclocal --warnings=all -I config autoreconf: configure.ac: tracing autoreconf: running: libtoolize --copy libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, `config'. libtoolize: copying file `config/ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIR, `config'. libtoolize: copying file `config/libtool.m4' libtoolize: copying file `config/ltoptions.m4' libtoolize: copying file `config/ltsugar.m4' libtoolize: copying file `config/ltversion.m4' libtoolize: copying file `config/lt~obsolete.m4' autoreconf: running: /usr/bin/autoconf --warnings=all autoreconf: running: /usr/bin/autoheader --warnings=all autoreconf: running: automake --add-missing --copy --no-force --warnings=all configure.ac:640: error: required file 'src/python/pypresso.in' not found autoreconf: automake failed with exit status: 1 autoreconf: Entering directory `.' autoreconf: configure.ac: not using Gettext autoreconf: running: aclocal --force --warnings=all -I config autoreconf: configure.ac: tracing autoreconf: configure.ac: not running libtoolize: --install not given autoreconf: running: /usr/bin/autoconf --force --warnings=all autoreconf: running: /usr/bin/autoheader --force --warnings=all autoreconf: running: automake --force-missing --warnings=all configure.ac:640: error: required file 'src/python/pypresso.in' not found autoreconf: automake failed with exit status: 1 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE Archiving workspace Deleting old workspace snapshot from #154. Archiving artifacts From MAILER-DAEMON Fri May 16 14:25:52 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WlMpM-00027Z-2J for mharc-espressomd-maintainer@gnu.org; Fri, 16 May 2014 14:25:52 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:44378) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WlMpD-00020s-MP for espressomd-maintainer@nongnu.org; Fri, 16 May 2014 14:25:50 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WlMp6-0003M1-OE for espressomd-maintainer@nongnu.org; Fri, 16 May 2014 14:25:43 -0400 Received: from hydra-out.rus.uni-stuttgart.de ([2001:7c0:2041:25::1:3]:60487 helo=hydra.rus.uni-stuttgart.de) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WlMp6-0003LN-Ig for espressomd-maintainer@nongnu.org; Fri, 16 May 2014 14:25:36 -0400 Received: from localhost (localhost [127.0.0.1]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP id EBBDF12CADD for ; Fri, 16 May 2014 20:25:34 +0200 (CEST) X-Virus-Scanned: by amavisd-new at hydra.rus.uni-stuttgart.de Received: from hydra.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (hydra.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id vLwqtxfSW8he for ; Fri, 16 May 2014 20:25:30 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (imap.icp.uni-stuttgart.de [129.69.120.76]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Fri, 16 May 2014 20:25:30 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 66054A40EE for ; Fri, 16 May 2014 20:25:30 +0200 (CEST) Date: Fri, 16 May 2014 20:25:30 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <300774639.4.1400264730400.JavaMail.jenkins@elk> In-Reply-To: <1567086138.3.1400264315703.JavaMail.jenkins@elk> References: <1567086138.3.1400264315703.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-fetch-bootstrap X-Jenkins-Result: SUCCESS X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2001:7c0:2041:25::1:3 Subject: [Espressomd-maintainer] Jenkins build is back to normal : master-fetch-bootstrap #156 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Fri, 16 May 2014 18:25:50 -0000 See From MAILER-DAEMON Fri May 16 14:28:22 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WlMrm-0002fX-55 for mharc-espressomd-maintainer@gnu.org; Fri, 16 May 2014 14:28:22 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:45062) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WlMre-0002fJ-Id for espressomd-maintainer@nongnu.org; Fri, 16 May 2014 14:28:19 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WlMrZ-0004E0-9Q for espressomd-maintainer@nongnu.org; Fri, 16 May 2014 14:28:14 -0400 Received: from charon-out.rus.uni-stuttgart.de ([2001:7c0:2041:25::1:1]:59078 helo=charon.rus.uni-stuttgart.de) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WlMrY-0004Dq-Uq for espressomd-maintainer@nongnu.org; Fri, 16 May 2014 14:28:09 -0400 Received: from localhost (localhost [127.0.0.1]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP id 1BCEF5FEB4 for ; Fri, 16 May 2014 20:28:08 +0200 (CEST) X-Virus-Scanned: by amavisd-new at charon.rus.uni-stuttgart.de Received: from charon.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (charon.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id yWmv2d70MTp4 for ; Fri, 16 May 2014 20:26:38 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (mailrelay.icp.uni-stuttgart.de [129.69.120.76]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Fri, 16 May 2014 20:26:38 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id B1F4AA40EE for ; Fri, 16 May 2014 20:26:38 +0200 (CEST) Date: Fri, 16 May 2014 20:26:38 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <578419083.5.1400264798707.JavaMail.jenkins@elk> In-Reply-To: <226810323.1.1400261292598.JavaMail.jenkins@elk> References: <226810323.1.1400261292598.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-build-check X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2001:7c0:2041:25::1:1 Subject: [Espressomd-maintainer] Build failed in Jenkins: master-build-check #163 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Fri, 16 May 2014 18:28:20 -0000 See Changes: [Olaf Lenz] Added forgotten file ------------------------------------------ [...truncated 223 lines...] checking for pow... yes checking for rint... yes checking for select... yes checking for socket... yes checking for sqrt... yes **************************************************************** * Checking for required tools and libraries * **************************************************************** checking whether to use FFTW... yes checking for library containing fftw_plan_many_dft... -lfftw3 checking fftw3.h usability... yes checking fftw3.h presence... yes checking for fftw3.h... yes checking whether to use CUDA... yes checking for nvcc... /usr/local/cuda/bin/nvcc checking if /usr/local/cuda/bin/nvcc supports -c -o file.o... no checking if /usr/local/cuda/bin/nvcc supports -c -o file.o... (cached) no checking whether the /usr/local/cuda/bin/nvcc linker (/usr/x86_64-suse-linux/bin/ld -m elf_x86_64) supports shared libraries... yes checking how to hardcode library paths into programs... immediate checking for libcudart... yes checking for libcufft... yes checking whether CUDA compiles... yes checking whether CUDA runs... yes **************************************************************** * Checking for Python * **************************************************************** checking for a Python interpreter with version >= 2.5... python checking for python... /usr/local/bin/python checking for python version... 2.7 checking for python platform... linux2 checking for python script directory... ${prefix}/lib/python2.7/site-packages checking for python extension module directory... ${exec_prefix}/lib/python2.7/site-packages checking whether python -B works... yes checking whether to build the python interface... no **************************************************************** * Checking for Tcl/Tk * **************************************************************** checking whether to build the Tcl interface... yes checking for libtcl8.6... no checking for libtcl8.5... yes checking for tcl.h... yes checking whether to use Tk... yes **************************************************************** * Other settings * **************************************************************** checking whether to use efence... no checking whether the variable MYCONFIG is set... no checking the number of available CPUs... 8 **************************************************************** * Creating output files * **************************************************************** checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating config/Makefile config.status: creating config/myconfig-sample-header.hpp config.status: creating src/Makefile config.status: creating src/tcl/Makefile config.status: creating src/python/Makefile config.status: creating src/python/espresso/Makefile config.status: creating tools/Makefile config.status: creating scripts/Makefile config.status: creating testsuite/Makefile config.status: creating doc/Makefile config.status: creating doc/logo/Makefile config.status: creating doc/ug/Makefile config.status: creating doc/dg/Makefile config.status: creating doc/doxygen/Makefile config.status: creating doc/tutorials/Makefile config.status: creating doc/tutorials/01-lennard_jones/Makefile config.status: creating doc/tutorials/02-charged_system/Makefile config.status: creating doc/tutorials/03-object_in_fluid/Makefile config.status: creating doc/latexit.sh config.status: creating testsuite/runtest.sh config.status: creating tools/es_mpiexec config.status: creating src/python/pypresso config.status: creating src/acconfig.hpp config.status: executing depfiles commands config.status: executing libtool commands config.status: executing myconfig-sample.hpp commands **************************************************************** * Configuration summary * **************************************************************** platform detected = x86_64-unknown-linux-gnu package version = 3.2.0-977-gd0e8745 development sources = yes Compiler -------- compiler = mpic++ linker = /usr/x86_64-suse-linux/bin/ld -m elf_x86_64 c++ compiler flags = -Wall -O5 c++ preprocessor flags = linker flags = -L/usr/local/cuda/lib64 libraries = -ltcl8.5 -lcufft -lcudart -lfftw3 -lm using debug flags = using profiling flags = Libraries --------- FFTW = yes efence = no Cuda ---- CUDA compiler = /usr/local/cuda/bin/nvcc CUDA flags = --ptxas-options=-v -gencode arch=compute_20,code=compute_20 Tcl/Tk ------ Tcl version = tcl8.5 Tk version = none Python ------ python = /usr/local/bin/python -B build python interface = no Other settings -------------- config = myconfig.hpp installation prefix = /home/jenkins/Espresso number of test tasks = 8 mympiexec = mpiexec = /usr/lib64/mpi/gcc/openmpi/bin/mpiexec pdflatex = /usr/bin/pdflatex makeindex = /usr/bin/makeindex bibtex = /usr/bin/bibtex doxygen = /usr/bin/doxygen dot = /usr/bin/dot Not building Python interface. END CONFIGURE + maintainer/jenkins/build.sh srcdir= builddir= insource=true START BUILD myconfig=maxset build_procs=1 Copying maxset.hpp to >make -j 1 Making all in config make[1]: Entering directory ` make[1]: Nothing to be done for `all'. make[1]: Leaving directory ` Making all in src make[1]: Entering directory ` GEN myconfig-final.hpp <= ../myconfig.hpp GEN config-features.hpp make all-recursive make[2]: Entering directory ` Making all in . make[3]: Entering directory ` CXX config-features.lo CXX cells.lo CXX collision.lo CXX communication.lo communication.cpp: In function 'void mpi_external_potential_broadcast(int)': communication.cpp:2929:31: warning: unused variable 'e' [-Wunused-variable] CXX comfixed.lo CXX comforce.lo CXX constraint.lo CXX cuda_interface.lo CXX debug.lo CXX domain_decomposition.lo CXX electrokinetics_pdb_parse.lo CXX energy.lo CXX external_potential.lo external_potential.cpp: In function 'int lattice_read_file(Lattice*, char*)': external_potential.cpp:176:46: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] CXX errorhandling.lo CXX fft.lo CXX fft-common.lo CXX fft-dipolar.lo CXX forcecap.lo CXX forces.lo CXX galilei.lo CXX ghosts.lo CXX global.lo CXX grid.lo CXX halo.lo CXX iccp3m.lo CXX imd.lo CXX initialize.lo CXX integrate.lo CXX interaction_data.lo CXX lattice.lo lattice.cpp: In function 'void lattice_interpolate_linear_gradient(Lattice*, double*, double*)': lattice.cpp:151:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:156:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:163:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:170:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:177:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:184:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:191:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:198:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:205:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:145:11: warning: unused variable 'w' [-Wunused-variable] lattice.cpp:145:17: warning: unused variable 'wd' [-Wunused-variable] lattice.cpp:146:12: warning: unused variable 'temp_index' [-Wunused-variable] lattice.cpp: In function 'void lattice_interpolate_linear(Lattice*, double*, double*)': lattice.cpp:253:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:260:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:234:12: warning: unused variable 'temp_index' [-Wunused-variable] CXX layered.lo CXX lb.lo lb.cpp: In function 'int lb_lbfluid_print_vtk_boundary(char*)': lb.cpp:598:271: error: invalid operands of types 'double [3]' and 'double' to binary 'operator*' lb.cpp:598:292: error: invalid operands of types 'double [3]' and 'double' to binary 'operator*' lb.cpp:598:313: error: invalid operands of types 'double [3]' and 'double' to binary 'operator*' lb.cpp: In function 'int lb_lbfluid_print_vtk_velocity(char*)': lb.cpp:687:271: error: invalid operands of types 'double [3]' and 'double' to binary 'operator*' lb.cpp:687:292: error: invalid operands of types 'double [3]' and 'double' to binary 'operator*' lb.cpp:687:313: error: invalid operands of types 'double [3]' and 'double' to binary 'operator*' lb.cpp: In function 'int lb_lbfluid_print_boundary(char*)': lb.cpp:734:40: error: invalid operands of types 'double' and 'double [3]' to binary 'operator/' lb.cpp:735:40: error: invalid operands of types 'double' and 'double [3]' to binary 'operator/' lb.cpp:736:40: error: invalid operands of types 'double' and 'double [3]' to binary 'operator/' lb.cpp:743:63: error: invalid operands of types 'double' and 'double [3]' to binary 'operator*' lb.cpp:743:93: error: invalid operands of types 'double' and 'double [3]' to binary 'operator*' lb.cpp:743:123: error: invalid operands of types 'double' and 'double [3]' to binary 'operator*' lb.cpp: In function 'int lb_lbfluid_print_velocity(char*)': lb.cpp:786:40: error: invalid operands of types 'double' and 'double [3]' to binary 'operator/' lb.cpp:787:40: error: invalid operands of types 'double' and 'double [3]' to binary 'operator/' lb.cpp:788:40: error: invalid operands of types 'double' and 'double [3]' to binary 'operator/' lb.cpp:798:69: error: invalid operands of types 'double' and 'double [3]' to binary 'operator*' lb.cpp:798:99: error: invalid operands of types 'double' and 'double [3]' to binary 'operator*' lb.cpp:798:129: error: invalid operands of types 'double' and 'double [3]' to binary 'operator*' lb.cpp: In function 'void calc_particle_lattice_ia()': lb.cpp:2997:53: error: invalid operands of types 'double' and 'double [3]' to binary 'operator*' lb.cpp:2997:102: error: invalid operands of types 'double' and 'double [3]' to binary 'operator*' lb.cpp:2998:56: error: invalid operands of types 'double' and 'double [3]' to binary 'operator*' lb.cpp:2998:105: error: invalid operands of types 'double' and 'double [3]' to binary 'operator*' lb.cpp:2999:56: error: invalid operands of types 'double' and 'double [3]' to binary 'operator*' lb.cpp:2999:105: error: invalid operands of types 'double' and 'double [3]' to binary 'operator*' make[3]: *** [lb.lo] Error 1 make[3]: Leaving directory ` make[2]: *** [all-recursive] Error 1 make[2]: Leaving directory ` make[1]: *** [all] Error 2 make[1]: Leaving directory ` make: *** [all-recursive] Error 1 + exit 1 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE Archiving artifacts From MAILER-DAEMON Fri May 16 15:13:20 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WlNZI-0004g4-C6 for mharc-espressomd-maintainer@gnu.org; Fri, 16 May 2014 15:13:20 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:55563) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WlNZB-0004dz-2Q for espressomd-maintainer@nongnu.org; Fri, 16 May 2014 15:13:19 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WlNZ2-0004c9-73 for espressomd-maintainer@nongnu.org; Fri, 16 May 2014 15:13:13 -0400 Received: from charon.rus.uni-stuttgart.de ([129.69.192.1]:58781) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WlNZ1-0004bp-Tk for espressomd-maintainer@nongnu.org; Fri, 16 May 2014 15:13:04 -0400 Received: from localhost (localhost [127.0.0.1]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP id 593665FF5F for ; Fri, 16 May 2014 21:13:02 +0200 (CEST) X-Virus-Scanned: by amavisd-new at charon.rus.uni-stuttgart.de Received: from charon.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (charon.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id i6YUf9A6NCe9 for ; Fri, 16 May 2014 21:11:33 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (imap.icp.uni-stuttgart.de [129.69.120.76]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Fri, 16 May 2014 21:11:33 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id C5B16A40EE for ; Fri, 16 May 2014 21:11:33 +0200 (CEST) Date: Fri, 16 May 2014 21:11:33 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <325377139.6.1400267493712.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-build-check X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.1 Subject: [Espressomd-maintainer] Build failed in Jenkins: master-build-check #165 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Fri, 16 May 2014 19:13:19 -0000 See Changes: [Olaf Lenz] Fixes to a bunch of bugs. ------------------------------------------ [...truncated 296 lines...] config.status: creating src/python/pypresso config.status: creating src/acconfig.hpp config.status: executing depfiles commands config.status: executing libtool commands config.status: executing myconfig-sample.hpp commands **************************************************************** * Configuration summary * **************************************************************** platform detected = x86_64-unknown-linux-gnu package version = 3.2.0-978-gb8c2031 development sources = yes Compiler -------- compiler = mpic++ linker = /usr/x86_64-suse-linux/bin/ld -m elf_x86_64 c++ compiler flags = -Wall -O5 c++ preprocessor flags = linker flags = -L/usr/local/cuda/lib64 libraries = -ltcl8.5 -lcufft -lcudart -lfftw3 -lm using debug flags = using profiling flags = Libraries --------- FFTW = yes efence = no Cuda ---- CUDA compiler = /usr/local/cuda/bin/nvcc CUDA flags = --ptxas-options=-v -gencode arch=compute_20,code=compute_20 Tcl/Tk ------ Tcl version = tcl8.5 Tk version = none Python ------ python = /usr/local/bin/python -B build python interface = no Other settings -------------- config = myconfig.hpp installation prefix = /home/jenkins/Espresso number of test tasks = 8 mympiexec = mpiexec = /usr/lib64/mpi/gcc/openmpi/bin/mpiexec pdflatex = /usr/bin/pdflatex makeindex = /usr/bin/makeindex bibtex = /usr/bin/bibtex doxygen = /usr/bin/doxygen dot = /usr/bin/dot Not building Python interface. END CONFIGURE + maintainer/jenkins/build.sh srcdir= builddir= insource=true START BUILD myconfig=maxset build_procs=1 Copying maxset.hpp to >make -j 1 Making all in config make[1]: Entering directory ` make[1]: Nothing to be done for `all'. make[1]: Leaving directory ` Making all in src make[1]: Entering directory ` GEN myconfig-final.hpp <= ../myconfig.hpp GEN config-features.hpp make all-recursive make[2]: Entering directory ` Making all in . make[3]: Entering directory ` CXX config-features.lo CXX cells.lo CXX collision.lo CXX communication.lo communication.cpp: In function 'void mpi_external_potential_broadcast(int)': communication.cpp:2929:31: warning: unused variable 'e' [-Wunused-variable] CXX comfixed.lo CXX comforce.lo CXX constraint.lo CXX cuda_interface.lo CXX debug.lo CXX domain_decomposition.lo CXX electrokinetics_pdb_parse.lo CXX energy.lo CXX external_potential.lo external_potential.cpp: In function 'int lattice_read_file(Lattice*, char*)': external_potential.cpp:176:46: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] CXX errorhandling.lo CXX fft.lo CXX fft-common.lo CXX fft-dipolar.lo CXX forcecap.lo CXX forces.lo CXX galilei.lo CXX ghosts.lo CXX global.lo CXX grid.lo CXX halo.lo CXX iccp3m.lo CXX imd.lo CXX initialize.lo CXX integrate.lo CXX interaction_data.lo CXX lattice.lo lattice.cpp: In function 'void lattice_interpolate_linear_gradient(Lattice*, double*, double*)': lattice.cpp:151:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:156:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:163:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:170:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:177:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:184:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:191:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:198:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:205:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:145:11: warning: unused variable 'w' [-Wunused-variable] lattice.cpp:145:17: warning: unused variable 'wd' [-Wunused-variable] lattice.cpp:146:12: warning: unused variable 'temp_index' [-Wunused-variable] lattice.cpp: In function 'void lattice_interpolate_linear(Lattice*, double*, double*)': lattice.cpp:253:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:260:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:234:12: warning: unused variable 'temp_index' [-Wunused-variable] CXX layered.lo CXX lb.lo CXX lb-boundaries.lo CXX lbgpu.lo CXX metadynamics.lo CXX modes.lo CXX molforces.lo CXX mol_cut.lo CXX nemd.lo CXX nsquare.lo CXX particle_data.lo CXX polymer.lo CXX pressure.lo CXX random.lo CXX rattle.lo CXX reaction.lo CXX rotation.lo CXX specfunc.lo CXX statistics.lo CXX statistics_chain.lo CXX statistics_cluster.lo CXX statistics_correlation.lo CXX statistics_fluid.lo CXX statistics_molecule.lo CXX statistics_observable.lo statistics_observable.cpp: In function 'int observable_calc_radial_density_profile(observable*)': statistics_observable.cpp:631:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_radial_flux_density_profile(observable*)': statistics_observable.cpp:683:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_flux_density_profile(observable*)': statistics_observable.cpp:765:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_particle_positions(observable*)': statistics_observable.cpp:801:16: warning: unused variable 'i' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_calc_particle_forces(observable*)': statistics_observable.cpp:821:16: warning: unused variable 'i' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_reset_average(observable*)': statistics_observable.cpp:885:9: warning: unused variable 'error' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_calculate(observable*)': statistics_observable.cpp:41:10: warning: 'temp' may be used uninitialized in this function [-Wmaybe-uninitialized] statistics_observable.cpp: In function 'int observable_update(observable*)': statistics_observable.cpp:49:10: warning: 'temp' may be used uninitialized in this function [-Wmaybe-uninitialized] CXX statistics_wallstuff.lo CXX thermostat.lo CXX topology.lo CXX tuning.lo CXX uwerr.lo CXX verlet.lo CXX virtual_sites.lo CXX virtual_sites_com.lo CXX virtual_sites_relative.lo CXX vmdsock.lo CXX ghmc.lo CXX EspressoSystemInterface.lo CXX bmhtf-nacl.lo CXX buckingham.lo CXX dpd.lo CXX gaussian.lo CXX gb.lo CXX hat.lo CXX hertzian.lo CXX lj.lo CXX ljangle.lo CXX ljcos.lo CXX ljcos2.lo CXX ljgen.lo CXX morse.lo CXX soft_sphere.lo CXX steppot.lo CXX tab.lo CXX tunable_slip.lo CXX angle.lo CXX angle_harmonic.lo CXX angle_cosine.lo CXX angle_cossquare.lo CXX angledist.lo CXX dihedral.lo CXX endangledist.lo CXX fene.lo CXX harmonic.lo CXX overlap.lo CXX subt_lj.lo CXX object-in-fluid/area_force_local.lo CXX object-in-fluid/area_force_global.lo CXX object-in-fluid/bending_force.lo CXX object-in-fluid/stretching_force.lo CXX object-in-fluid/stretchlin_force.lo CXX object-in-fluid/volume_force.lo CXX debye_hueckel.lo CXX elc.lo CXX magnetic_non_p3m_methods.lo CXX mdlc_correction.lo CXX maggs.lo CXX mmm1d.lo CXX mmm2d.lo CXX mmm-common.lo CXX p3m.lo CXX p3m-common.lo CXX p3m-dipolar.lo CXX reaction_field.lo NVCC cuda_init_cuda.lo NVCC cuda_common_cuda.lo NVCC electrokinetics_cuda.lo NVCC lbgpu_cuda.lo lbgpu_cuda.cu(3567): error: identifier "get_interpolated_velocity" is undefined 1 error detected in the compilation of "/tmp/tmpxft_0000221e_00000000-6_lbgpu_cuda.cpp1.ii". make[3]: *** [lbgpu_cuda.lo] Error 1 make[3]: Leaving directory ` make[2]: *** [all-recursive] Error 1 make[2]: Leaving directory ` make[1]: *** [all] Error 2 make[1]: Leaving directory ` make: *** [all-recursive] Error 1 + exit 1 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE Archiving artifacts From MAILER-DAEMON Fri May 16 18:57:48 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WlR4W-0002N9-Py for mharc-espressomd-maintainer@gnu.org; Fri, 16 May 2014 18:57:48 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:38092) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WlR4P-0002Mw-G6 for espressomd-maintainer@nongnu.org; Fri, 16 May 2014 18:57:48 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WlR4I-0002n7-Lv for espressomd-maintainer@nongnu.org; Fri, 16 May 2014 18:57:41 -0400 Received: from charon-out.rus.uni-stuttgart.de ([2001:7c0:2041:25::1:1]:42132 helo=charon.rus.uni-stuttgart.de) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WlR4I-0002mu-6v for espressomd-maintainer@nongnu.org; Fri, 16 May 2014 18:57:34 -0400 Received: from localhost (localhost [127.0.0.1]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP id B72615FF00 for ; Sat, 17 May 2014 00:57:31 +0200 (CEST) X-Virus-Scanned: by amavisd-new at charon.rus.uni-stuttgart.de Received: from charon.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (charon.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id eIOzj4sSg2k0 for ; Sat, 17 May 2014 00:56:02 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (icp.uni-stuttgart.de [129.69.120.76]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Sat, 17 May 2014 00:56:02 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id DBB29A40EE for ; Sat, 17 May 2014 00:56:02 +0200 (CEST) Date: Sat, 17 May 2014 00:56:02 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1501864032.7.1400280962879.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-nightly-distcheck X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2001:7c0:2041:25::1:1 Subject: [Espressomd-maintainer] Build failed in Jenkins: master-nightly-distcheck #76 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Fri, 16 May 2014 22:57:48 -0000 See Changes: [Olaf Lenz] Fixes to a bunch of bugs. ------------------------------------------ [...truncated 861 lines...] platform detected = x86_64-unknown-linux-gnu package version = 3.2.0-978-gb8c2031 development sources = no Compiler -------- compiler = mpic++ linker = /usr/x86_64-suse-linux/bin/ld -m elf_x86_64 c++ compiler flags = -Wall -O5 c++ preprocessor flags = linker flags = -L/usr/local/cuda/lib64 libraries = -ltcl8.5 -lcufft -lcudart -lfftw3 -lm using debug flags = using profiling flags = Libraries --------- FFTW = yes efence = no Cuda ---- CUDA compiler = /usr/local/cuda/bin/nvcc CUDA flags = --ptxas-options=-v -gencode arch=compute_20,code=compute_20 Tcl/Tk ------ Tcl version = tcl8.5 Tk version = none Python ------ python = /usr/local/bin/python -B build python interface = no Other settings -------------- config = myconfig.hpp installation prefix = number of test tasks = 8 mympiexec = mpiexec = /usr/lib64/mpi/gcc/openmpi/bin/mpiexec pdflatex = /usr/bin/pdflatex makeindex = /usr/bin/makeindex bibtex = /usr/bin/bibtex doxygen = /usr/bin/doxygen dot = /usr/bin/dot Not building Python interface. make[1]: Entering directory ` Making all in config make[2]: Entering directory ` make[2]: Nothing to be done for `all'. make[2]: Leaving directory ` Making all in src make[2]: Entering directory ` GEN myconfig-final.hpp <= ../../src/myconfig-default.hpp make all-recursive make[3]: Entering directory ` Making all in . make[4]: Entering directory ` CXX config-features.lo CXX cells.lo CXX collision.lo CXX communication.lo ../../src/communication.cpp: In function 'void mpi_external_potential_broadcast(int)': ../../src/communication.cpp:2929:31: warning: unused variable 'e' [-Wunused-variable] CXX comfixed.lo CXX comforce.lo CXX constraint.lo CXX cuda_interface.lo CXX debug.lo CXX domain_decomposition.lo CXX electrokinetics_pdb_parse.lo CXX energy.lo CXX external_potential.lo ../../src/external_potential.cpp: In function 'int lattice_read_file(Lattice*, char*)': ../../src/external_potential.cpp:176:46: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] CXX errorhandling.lo CXX fft.lo CXX fft-common.lo CXX fft-dipolar.lo CXX forcecap.lo CXX forces.lo CXX galilei.lo CXX ghosts.lo CXX global.lo CXX grid.lo CXX halo.lo CXX iccp3m.lo CXX imd.lo CXX initialize.lo CXX integrate.lo CXX interaction_data.lo CXX lattice.lo ../../src/lattice.cpp: In function 'void lattice_interpolate_linear_gradient(Lattice*, double*, double*)': ../../src/lattice.cpp:151:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/lattice.cpp:156:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/lattice.cpp:163:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/lattice.cpp:170:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/lattice.cpp:177:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/lattice.cpp:184:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/lattice.cpp:191:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/lattice.cpp:198:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/lattice.cpp:205:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/lattice.cpp:145:11: warning: unused variable 'w' [-Wunused-variable] ../../src/lattice.cpp:145:17: warning: unused variable 'wd' [-Wunused-variable] ../../src/lattice.cpp:146:12: warning: unused variable 'temp_index' [-Wunused-variable] ../../src/lattice.cpp: In function 'void lattice_interpolate_linear(Lattice*, double*, double*)': ../../src/lattice.cpp:253:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/lattice.cpp:260:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/lattice.cpp:234:12: warning: unused variable 'temp_index' [-Wunused-variable] CXX layered.lo CXX lb.lo CXX lb-boundaries.lo CXX lbgpu.lo CXX metadynamics.lo CXX modes.lo CXX molforces.lo CXX mol_cut.lo CXX nemd.lo CXX nsquare.lo CXX particle_data.lo CXX polymer.lo CXX pressure.lo CXX random.lo CXX rattle.lo CXX reaction.lo CXX rotation.lo CXX specfunc.lo CXX statistics.lo CXX statistics_chain.lo CXX statistics_cluster.lo CXX statistics_correlation.lo CXX statistics_fluid.lo CXX statistics_molecule.lo CXX statistics_observable.lo ../../src/statistics_observable.cpp: In function 'int observable_calc_radial_density_profile(observable*)': ../../src/statistics_observable.cpp:631:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/statistics_observable.cpp: In function 'int observable_calc_radial_flux_density_profile(observable*)': ../../src/statistics_observable.cpp:683:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/statistics_observable.cpp: In function 'int observable_calc_flux_density_profile(observable*)': ../../src/statistics_observable.cpp:765:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/statistics_observable.cpp: In function 'int observable_calc_particle_positions(observable*)': ../../src/statistics_observable.cpp:801:16: warning: unused variable 'i' [-Wunused-variable] ../../src/statistics_observable.cpp: In function 'int observable_calc_particle_forces(observable*)': ../../src/statistics_observable.cpp:821:16: warning: unused variable 'i' [-Wunused-variable] ../../src/statistics_observable.cpp: In function 'int observable_reset_average(observable*)': ../../src/statistics_observable.cpp:885:9: warning: unused variable 'error' [-Wunused-variable] ../../src/statistics_observable.cpp: In function 'int observable_calculate(observable*)': ../../src/statistics_observable.cpp:41:10: warning: 'temp' may be used uninitialized in this function [-Wmaybe-uninitialized] ../../src/statistics_observable.cpp: In function 'int observable_update(observable*)': ../../src/statistics_observable.cpp:49:10: warning: 'temp' may be used uninitialized in this function [-Wmaybe-uninitialized] CXX statistics_wallstuff.lo CXX thermostat.lo CXX topology.lo CXX tuning.lo CXX uwerr.lo CXX verlet.lo CXX virtual_sites.lo CXX virtual_sites_com.lo CXX virtual_sites_relative.lo CXX vmdsock.lo CXX ghmc.lo CXX EspressoSystemInterface.lo CXX bmhtf-nacl.lo CXX buckingham.lo CXX dpd.lo CXX gaussian.lo CXX gb.lo CXX hat.lo CXX hertzian.lo CXX lj.lo CXX ljangle.lo CXX ljcos.lo CXX ljcos2.lo CXX ljgen.lo CXX morse.lo CXX soft_sphere.lo CXX steppot.lo CXX tab.lo CXX tunable_slip.lo CXX angle.lo CXX angle_harmonic.lo CXX angle_cosine.lo CXX angle_cossquare.lo CXX angledist.lo CXX dihedral.lo CXX endangledist.lo CXX fene.lo CXX harmonic.lo CXX overlap.lo CXX subt_lj.lo CXX object-in-fluid/area_force_local.lo CXX object-in-fluid/area_force_global.lo CXX object-in-fluid/bending_force.lo CXX object-in-fluid/stretching_force.lo CXX object-in-fluid/stretchlin_force.lo CXX object-in-fluid/volume_force.lo CXX debye_hueckel.lo CXX elc.lo CXX magnetic_non_p3m_methods.lo CXX mdlc_correction.lo CXX maggs.lo CXX mmm1d.lo CXX mmm2d.lo CXX mmm-common.lo CXX p3m.lo CXX p3m-common.lo CXX p3m-dipolar.lo CXX reaction_field.lo NVCC cuda_init_cuda.lo NVCC cuda_common_cuda.lo NVCC electrokinetics_cuda.lo NVCC lbgpu_cuda.lo NVCC p3m_gpu_cuda.lo NVCC EspressoSystemInterface_cuda.lo NVCC HarmonicForce.lo GEN config-version.cpp CXX config-version.lo CXXLD libEspresso.la make[4]: Leaving directory ` Making all in tcl make[4]: Entering directory ` CXX bin_tcl.lo CXX binary_file_tcl.lo CXX blockfile_tcl.lo CXX cells_tcl.lo CXX channels_tcl.lo CXX collision_tcl.lo CXX comfixed_tcl.lo CXX comforce_tcl.lo CXX config_tcl.lo CXX constraint_tcl.lo ../../../src/tcl/constraint_tcl.cpp:28:31: fatal error: TclOutputHelper.hpp: No such file or directory compilation terminated. make[4]: *** [constraint_tcl.lo] Error 1 make[4]: Leaving directory ` make[3]: *** [all-recursive] Error 1 make[3]: Leaving directory ` make[2]: *** [all] Error 2 make[2]: Leaving directory ` make[1]: *** [all-recursive] Error 1 make[1]: Leaving directory ` make: *** [distcheck] Error 1 + exit 1 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE Archiving artifacts From MAILER-DAEMON Fri May 16 21:41:25 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WlTcr-00068w-Gy for mharc-espressomd-maintainer@gnu.org; Fri, 16 May 2014 21:41:25 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:59121) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WlTck-00068n-DQ for espressomd-maintainer@nongnu.org; Fri, 16 May 2014 21:41:24 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WlTce-0001zP-JB for espressomd-maintainer@nongnu.org; Fri, 16 May 2014 21:41:18 -0400 Received: from medousa.rus.uni-stuttgart.de ([129.69.192.4]:49606) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WlTce-0001zK-8q for espressomd-maintainer@nongnu.org; Fri, 16 May 2014 21:41:12 -0400 Received: from localhost (localhost [127.0.0.1]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP id 753EF37F72 for ; Sat, 17 May 2014 03:41:10 +0200 (CEST) X-Virus-Scanned: by amavisd-new at medousa.rus.uni-stuttgart.de Received: from medousa.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (medousa.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id emK8WfzE6eCl for ; Sat, 17 May 2014 03:41:05 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (imap.icp.uni-stuttgart.de [129.69.120.76]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Sat, 17 May 2014 03:41:05 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 4E046A40EE for ; Sat, 17 May 2014 03:41:05 +0200 (CEST) Date: Sat, 17 May 2014 03:41:05 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1618478452.8.1400290865250.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-nightly-mpich X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.4 Subject: [Espressomd-maintainer] Build failed in Jenkins: master-nightly-mpich #74 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Sat, 17 May 2014 01:41:24 -0000 See Changes: [Olaf Lenz] Fixes to a bunch of bugs. ------------------------------------------ [...truncated 268 lines...] config.status: creating testsuite/runtest.sh config.status: creating tools/es_mpiexec config.status: creating src/python/pypresso config.status: creating src/acconfig.hpp config.status: executing depfiles commands config.status: executing libtool commands config.status: executing myconfig-sample.hpp commands **************************************************************** * Configuration summary * **************************************************************** platform detected = x86_64-unknown-linux-gnu package version = 3.2.0-978-gb8c2031 development sources = yes Compiler -------- compiler = /home/jenkins/mpich/bin/mpicxx linker = /usr/x86_64-suse-linux/bin/ld -m elf_x86_64 c++ compiler flags = -Wall -O5 c++ preprocessor flags = linker flags = -L/usr/local/cuda/lib64 libraries = -ltcl8.5 -lcufft -lcudart -lfftw3 -lm using debug flags = using profiling flags = Libraries --------- FFTW = yes efence = no Cuda ---- CUDA compiler = /usr/local/cuda/bin/nvcc CUDA flags = --ptxas-options=-v -gencode arch=compute_20,code=compute_20 Tcl/Tk ------ Tcl version = tcl8.5 Tk version = none Python ------ python = /usr/local/bin/python -B build python interface = no Other settings -------------- config = myconfig.hpp installation prefix = /home/jenkins/Espresso number of test tasks = 8 mympiexec = mpiexec = /home/jenkins/mpich/bin/mpiexec pdflatex = /usr/bin/pdflatex makeindex = /usr/bin/makeindex bibtex = /usr/bin/bibtex doxygen = /usr/bin/doxygen dot = /usr/bin/dot Not building Python interface. END CONFIGURE + maintainer/jenkins/build.sh 23332 (process ID) old priority 0, new priority 5 srcdir= builddir= insource=true START BUILD myconfig=maxset build_procs=4 Copying maxset.hpp to >make -j 4 Making all in config make[1]: Entering directory ` make[1]: Nothing to be done for `all'. make[1]: Leaving directory ` Making all in src make[1]: Entering directory ` GEN myconfig-final.hpp <= ../myconfig.hpp GEN config-features.hpp GEN config-features.cpp make all-recursive make[2]: Entering directory ` Making all in . make[3]: Entering directory ` CXX config-features.lo CXX cells.lo CXX collision.lo CXX communication.lo CXX comfixed.lo CXX comforce.lo CXX constraint.lo CXX cuda_interface.lo communication.cpp: In function 'void mpi_external_potential_broadcast(int)': communication.cpp:2929:31: warning: unused variable 'e' [-Wunused-variable] CXX debug.lo CXX domain_decomposition.lo CXX electrokinetics_pdb_parse.lo CXX energy.lo CXX external_potential.lo CXX errorhandling.lo CXX fft.lo external_potential.cpp: In function 'int lattice_read_file(Lattice*, char*)': external_potential.cpp:176:46: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] CXX fft-common.lo CXX fft-dipolar.lo CXX forcecap.lo CXX forces.lo CXX galilei.lo CXX ghosts.lo CXX global.lo CXX grid.lo CXX halo.lo CXX iccp3m.lo CXX imd.lo CXX initialize.lo CXX integrate.lo CXX interaction_data.lo CXX lattice.lo CXX layered.lo lattice.cpp: In function 'void lattice_interpolate_linear_gradient(Lattice*, double*, double*)': lattice.cpp:151:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:156:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:163:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:170:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:177:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:184:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:191:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:198:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:205:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:145:11: warning: unused variable 'w' [-Wunused-variable] lattice.cpp:145:17: warning: unused variable 'wd' [-Wunused-variable] lattice.cpp:146:12: warning: unused variable 'temp_index' [-Wunused-variable] lattice.cpp: In function 'void lattice_interpolate_linear(Lattice*, double*, double*)': lattice.cpp:253:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:260:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:234:12: warning: unused variable 'temp_index' [-Wunused-variable] CXX lb.lo CXX lb-boundaries.lo CXX lbgpu.lo CXX metadynamics.lo CXX modes.lo CXX molforces.lo CXX mol_cut.lo CXX nemd.lo CXX nsquare.lo CXX particle_data.lo CXX polymer.lo CXX pressure.lo CXX random.lo CXX rattle.lo CXX reaction.lo CXX rotation.lo CXX specfunc.lo CXX statistics.lo CXX statistics_chain.lo CXX statistics_cluster.lo CXX statistics_correlation.lo CXX statistics_fluid.lo CXX statistics_molecule.lo CXX statistics_observable.lo CXX statistics_wallstuff.lo CXX thermostat.lo statistics_observable.cpp: In function 'int observable_calc_radial_density_profile(observable*)': statistics_observable.cpp:631:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_radial_flux_density_profile(observable*)': statistics_observable.cpp:683:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_flux_density_profile(observable*)': statistics_observable.cpp:765:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_particle_positions(observable*)': statistics_observable.cpp:801:16: warning: unused variable 'i' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_calc_particle_forces(observable*)': statistics_observable.cpp:821:16: warning: unused variable 'i' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_reset_average(observable*)': statistics_observable.cpp:885:9: warning: unused variable 'error' [-Wunused-variable] CXX topology.lo statistics_observable.cpp: In function 'int observable_calculate(observable*)': statistics_observable.cpp:41:10: warning: 'temp' may be used uninitialized in this function [-Wmaybe-uninitialized] statistics_observable.cpp: In function 'int observable_update(observable*)': statistics_observable.cpp:49:10: warning: 'temp' may be used uninitialized in this function [-Wmaybe-uninitialized] CXX tuning.lo CXX uwerr.lo CXX verlet.lo CXX virtual_sites.lo CXX virtual_sites_com.lo CXX virtual_sites_relative.lo CXX vmdsock.lo CXX ghmc.lo CXX EspressoSystemInterface.lo CXX bmhtf-nacl.lo CXX buckingham.lo CXX dpd.lo CXX gaussian.lo CXX gb.lo CXX hat.lo CXX hertzian.lo CXX lj.lo CXX ljangle.lo CXX ljcos.lo CXX ljcos2.lo CXX ljgen.lo CXX morse.lo CXX soft_sphere.lo CXX steppot.lo CXX tab.lo CXX tunable_slip.lo CXX angle.lo CXX angle_harmonic.lo CXX angle_cosine.lo CXX angle_cossquare.lo CXX angledist.lo CXX dihedral.lo CXX endangledist.lo CXX fene.lo CXX harmonic.lo CXX overlap.lo CXX subt_lj.lo CXX debye_hueckel.lo CXX elc.lo CXX magnetic_non_p3m_methods.lo CXX mdlc_correction.lo CXX maggs.lo CXX mmm1d.lo CXX mmm2d.lo CXX mmm-common.lo CXX p3m.lo CXX p3m-common.lo CXX p3m-dipolar.lo CXX reaction_field.lo NVCC cuda_init_cuda.lo NVCC cuda_common_cuda.lo NVCC electrokinetics_cuda.lo NVCC lbgpu_cuda.lo NVCC p3m_gpu_cuda.lo lbgpu_cuda.cu(3567): error: identifier "get_interpolated_velocity" is undefined 1 error detected in the compilation of "/tmp/tmpxft_00006bb9_00000000-6_lbgpu_cuda.cpp1.ii". make[3]: *** [lbgpu_cuda.lo] Error 1 make[3]: *** Waiting for unfinished jobs.... make[3]: Leaving directory ` make[2]: *** [all-recursive] Error 1 make[2]: Leaving directory ` make[1]: *** [all] Error 2 make[1]: Leaving directory ` make: *** [all-recursive] Error 1 + exit 1 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE Archiving artifacts From MAILER-DAEMON Fri May 16 22:08:41 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WlU3F-0003fo-Mh for mharc-espressomd-maintainer@gnu.org; Fri, 16 May 2014 22:08:41 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:33946) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WlU38-0003fX-Bk for espressomd-maintainer@nongnu.org; Fri, 16 May 2014 22:08:40 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WlU32-0001Bg-El for espressomd-maintainer@nongnu.org; Fri, 16 May 2014 22:08:34 -0400 Received: from medousa-out.rus.uni-stuttgart.de ([2001:7c0:2041:25::1:4]:58502 helo=medousa.rus.uni-stuttgart.de) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WlU32-0001Ba-4r for espressomd-maintainer@nongnu.org; Fri, 16 May 2014 22:08:28 -0400 Received: from localhost (localhost [127.0.0.1]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP id 6513B37F43 for ; Sat, 17 May 2014 04:08:26 +0200 (CEST) X-Virus-Scanned: by amavisd-new at medousa.rus.uni-stuttgart.de Received: from medousa.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (medousa.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id gS553UbWIUK3 for ; Sat, 17 May 2014 04:08:21 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (imap.icp.uni-stuttgart.de [129.69.120.76]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Sat, 17 May 2014 04:08:21 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id CEA3BA40EE for ; Sat, 17 May 2014 04:08:21 +0200 (CEST) Date: Sat, 17 May 2014 04:08:21 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1903335422.9.1400292501810.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-nightly-debug X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2001:7c0:2041:25::1:4 Subject: [Espressomd-maintainer] Build failed in Jenkins: master-nightly-debug #71 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Sat, 17 May 2014 02:08:40 -0000 See Changes: [Olaf Lenz] Fixes to a bunch of bugs. ------------------------------------------ [...truncated 277 lines...] **************************************************************** platform detected = x86_64-unknown-linux-gnu package version = 3.2.0-978-gb8c2031 development sources = yes Compiler -------- compiler = mpic++ linker = /usr/x86_64-suse-linux/bin/ld -m elf_x86_64 c++ compiler flags = -Wall -O5 c++ preprocessor flags = linker flags = -L/usr/local/cuda/lib64 libraries = -ltcl8.5 -lcufft -lcudart -lfftw3 -lm using debug flags = using profiling flags = Libraries --------- FFTW = yes efence = no Cuda ---- CUDA compiler = /usr/local/cuda/bin/nvcc CUDA flags = --ptxas-options=-v -gencode arch=compute_20,code=compute_20 Tcl/Tk ------ Tcl version = tcl8.5 Tk version = none Python ------ python = /usr/local/bin/python -B build python interface = no Other settings -------------- config = myconfig.hpp installation prefix = /home/jenkins/Espresso number of test tasks = 8 mympiexec = mpiexec = /usr/lib64/mpi/gcc/openmpi/bin/mpiexec pdflatex = /usr/bin/pdflatex makeindex = /usr/bin/makeindex bibtex = /usr/bin/bibtex doxygen = /usr/bin/doxygen dot = /usr/bin/dot Not building Python interface. END CONFIGURE + maintainer/jenkins/build.sh 22980 (process ID) old priority 0, new priority 5 srcdir= builddir= insource=true START BUILD myconfig=nocheck-maxset build_procs=4 Copying nocheck-maxset.hpp to >make -j 4 Making all in config make[1]: Entering directory ` make[1]: Nothing to be done for `all'. make[1]: Leaving directory ` Making all in src make[1]: Entering directory ` GEN myconfig-final.hpp <= ../myconfig.hpp GEN config-features.hpp GEN config-features.cpp make all-recursive make[2]: Entering directory ` Making all in . make[3]: Entering directory ` CXX cells.lo CXX config-features.lo CXX collision.lo CXX communication.lo CXX comfixed.lo CXX comforce.lo CXX constraint.lo CXX cuda_interface.lo CXX debug.lo communication.cpp: In function 'void mpi_external_potential_broadcast(int)': communication.cpp:2929:31: warning: unused variable 'e' [-Wunused-variable] CXX domain_decomposition.lo CXX electrokinetics_pdb_parse.lo CXX energy.lo CXX external_potential.lo CXX errorhandling.lo CXX fft.lo CXX fft-common.lo external_potential.cpp: In function 'int lattice_read_file(Lattice*, char*)': external_potential.cpp:176:46: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] CXX fft-dipolar.lo CXX forcecap.lo CXX forces.lo CXX galilei.lo CXX ghosts.lo CXX global.lo CXX grid.lo CXX halo.lo CXX iccp3m.lo CXX imd.lo CXX initialize.lo CXX integrate.lo CXX interaction_data.lo CXX lattice.lo lattice.cpp: In function 'void lattice_interpolate_linear_gradient(Lattice*, double*, double*)': lattice.cpp:151:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:156:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:163:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:170:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:177:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:184:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:191:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:198:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:205:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:145:11: warning: unused variable 'w' [-Wunused-variable] lattice.cpp:145:17: warning: unused variable 'wd' [-Wunused-variable] lattice.cpp:146:12: warning: unused variable 'temp_index' [-Wunused-variable] lattice.cpp: In function 'void lattice_interpolate_linear(Lattice*, double*, double*)': lattice.cpp:253:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:260:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:234:12: warning: unused variable 'temp_index' [-Wunused-variable] CXX layered.lo CXX lb.lo CXX lb-boundaries.lo lb.cpp: In function 'void lb_reinit_parameters()': lb.cpp:1830:3: warning: format '%f' expects argument of type 'double', but argument 9 has type 'double*' [-Wformat] lb.cpp:1830:3: warning: format '%f' expects argument of type 'double', but argument 10 has type 'double*' [-Wformat] CXX lbgpu.lo CXX metadynamics.lo CXX modes.lo CXX molforces.lo CXX mol_cut.lo CXX nemd.lo CXX nsquare.lo CXX particle_data.lo lb.cpp: At global scope: lb.cpp:152:12: warning: 'failcounter' defined but not used [-Wunused-variable] CXX polymer.lo CXX pressure.lo CXX random.lo CXX rattle.lo CXX reaction.lo CXX rotation.lo CXX specfunc.lo CXX statistics.lo CXX statistics_chain.lo CXX statistics_cluster.lo CXX statistics_correlation.lo CXX statistics_fluid.lo CXX statistics_molecule.lo CXX statistics_observable.lo CXX statistics_wallstuff.lo CXX thermostat.lo statistics_observable.cpp: In function 'int observable_calc_radial_density_profile(observable*)': statistics_observable.cpp:631:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_radial_flux_density_profile(observable*)': statistics_observable.cpp:683:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_flux_density_profile(observable*)': statistics_observable.cpp:765:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_particle_positions(observable*)': statistics_observable.cpp:801:16: warning: unused variable 'i' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_calc_particle_forces(observable*)': statistics_observable.cpp:821:16: warning: unused variable 'i' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_reset_average(observable*)': statistics_observable.cpp:885:9: warning: unused variable 'error' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_calculate(observable*)': statistics_observable.cpp:41:10: warning: 'temp' may be used uninitialized in this function [-Wmaybe-uninitialized] statistics_observable.cpp: In function 'int observable_update(observable*)': statistics_observable.cpp:49:10: warning: 'temp' may be used uninitialized in this function [-Wmaybe-uninitialized] CXX topology.lo CXX tuning.lo CXX uwerr.lo CXX verlet.lo CXX virtual_sites.lo CXX virtual_sites_com.lo CXX virtual_sites_relative.lo CXX vmdsock.lo CXX ghmc.lo CXX EspressoSystemInterface.lo CXX bmhtf-nacl.lo CXX buckingham.lo CXX dpd.lo CXX gaussian.lo CXX gb.lo CXX hat.lo CXX hertzian.lo CXX lj.lo CXX ljangle.lo CXX ljcos.lo CXX ljcos2.lo CXX ljgen.lo CXX morse.lo CXX soft_sphere.lo CXX steppot.lo CXX tab.lo CXX tunable_slip.lo CXX angle.lo CXX angle_harmonic.lo CXX angle_cosine.lo CXX angle_cossquare.lo CXX angledist.lo CXX dihedral.lo CXX endangledist.lo endangledist.cpp: In function 'int calc_endangledist_pair_force(Particle*, Particle*, Bonded_ia_parameters*, double*, double*, double*)': endangledist.cpp:239:3: warning: too many arguments for format [-Wformat-extra-args] CXX fene.lo endangledist.cpp:239:3: warning: 'fac_b' may be used uninitialized in this function [-Wmaybe-uninitialized] endangledist.cpp:239:3: warning: 'fac_a' may be used uninitialized in this function [-Wmaybe-uninitialized] endangledist.cpp:239:3: warning: 'dist' may be used uninitialized in this function [-Wmaybe-uninitialized] CXX harmonic.lo CXX overlap.lo CXX subt_lj.lo CXX debye_hueckel.lo CXX elc.lo CXX magnetic_non_p3m_methods.lo CXX mdlc_correction.lo CXX maggs.lo CXX mmm1d.lo CXX mmm2d.lo CXX mmm-common.lo CXX p3m.lo CXX p3m-common.lo CXX p3m-dipolar.lo CXX reaction_field.lo NVCC cuda_init_cuda.lo NVCC cuda_common_cuda.lo NVCC electrokinetics_cuda.lo NVCC lbgpu_cuda.lo NVCC p3m_gpu_cuda.lo lbgpu_cuda.cu(3567): error: identifier "get_interpolated_velocity" is undefined 1 error detected in the compilation of "/tmp/tmpxft_000063a8_00000000-6_lbgpu_cuda.cpp1.ii". make[3]: *** [lbgpu_cuda.lo] Error 1 make[3]: *** Waiting for unfinished jobs.... make[3]: Leaving directory ` make[2]: *** [all-recursive] Error 1 make[2]: Leaving directory ` make[1]: *** [all] Error 2 make[1]: Leaving directory ` make: *** [all-recursive] Error 1 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE Archiving artifacts From MAILER-DAEMON Fri May 16 22:17:27 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WlUBj-0004jB-1t for mharc-espressomd-maintainer@gnu.org; Fri, 16 May 2014 22:17:27 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:34892) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WlUBa-0004e3-HO for 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(imap.icp.uni-stuttgart.de [129.69.120.76]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Sat, 17 May 2014 04:15:39 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id E440AA41E5 for ; Sat, 17 May 2014 04:15:39 +0200 (CEST) Date: Sat, 17 May 2014 04:15:39 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <384883586.10.1400292939878.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: default,3core X-Jenkins-Result: UNSTABLE X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2001:7c0:2041:25::1:1 Subject: [Espressomd-maintainer] =?utf-8?q?Jenkins_build_became_unstable?= =?utf-8?q?=3A__master-nightly-multiconfig_=C2=BB_default=2C3core_=2386?= X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Sat, 17 May 2014 02:17:25 -0000 See From MAILER-DAEMON Mon May 19 05:16:32 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WmJgO-0001tg-0L for mharc-espressomd-maintainer@gnu.org; Mon, 19 May 2014 05:16:32 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:37847) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WmJgG-0001tL-6x for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 05:16:30 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WmJgA-0002fh-6Z for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 05:16:24 -0400 Received: from hydra-out.rus.uni-stuttgart.de ([2001:7c0:2041:25::1:3]:40485 helo=hydra.rus.uni-stuttgart.de) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WmJg9-0002eh-SZ for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 05:16:18 -0400 Received: from localhost (localhost [127.0.0.1]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP id DAFEF12C6C5 for ; Mon, 19 May 2014 11:16:09 +0200 (CEST) X-Virus-Scanned: by amavisd-new at hydra.rus.uni-stuttgart.de Received: from hydra.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (hydra.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id 5JP2auyxs6rU for ; Mon, 19 May 2014 11:16:05 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (icp.uni-stuttgart.de [129.69.120.76]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Mon, 19 May 2014 11:16:05 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 51685A40EE for ; Mon, 19 May 2014 11:16:05 +0200 (CEST) Date: Mon, 19 May 2014 11:16:05 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1766421331.11.1400490965277.JavaMail.jenkins@elk> In-Reply-To: <325377139.6.1400267493712.JavaMail.jenkins@elk> References: <325377139.6.1400267493712.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-build-check X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2001:7c0:2041:25::1:3 Subject: [Espressomd-maintainer] Build failed in Jenkins: master-build-check #166 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Mon, 19 May 2014 09:16:30 -0000 See Changes: [Olaf Lenz] Small fix. ------------------------------------------ [...truncated 298 lines...] config.status: creating src/python/pypresso config.status: creating src/acconfig.hpp config.status: executing depfiles commands config.status: executing libtool commands config.status: executing myconfig-sample.hpp commands **************************************************************** * Configuration summary * **************************************************************** platform detected = x86_64-unknown-linux-gnu package version = 3.2.0-979-g9855eef development sources = yes Compiler -------- compiler = mpic++ linker = /usr/x86_64-suse-linux/bin/ld -m elf_x86_64 c++ compiler flags = -Wall -O5 c++ preprocessor flags = linker flags = -L/usr/local/cuda/lib64 libraries = -ltcl8.5 -lcufft -lcudart -lfftw3 -lm using debug flags = using profiling flags = Libraries --------- FFTW = yes efence = no Cuda ---- CUDA compiler = /usr/local/cuda/bin/nvcc CUDA flags = --ptxas-options=-v -gencode arch=compute_20,code=compute_20 Tcl/Tk ------ Tcl version = tcl8.5 Tk version = none Python ------ python = /usr/local/bin/python -B build python interface = no Other settings -------------- config = myconfig.hpp installation prefix = /home/jenkins/Espresso number of test tasks = 8 mympiexec = mpiexec = /usr/lib64/mpi/gcc/openmpi/bin/mpiexec pdflatex = /usr/bin/pdflatex makeindex = /usr/bin/makeindex bibtex = /usr/bin/bibtex doxygen = /usr/bin/doxygen dot = /usr/bin/dot Not building Python interface. END CONFIGURE + maintainer/jenkins/build.sh srcdir= builddir= insource=true START BUILD myconfig=maxset build_procs=1 Copying maxset.hpp to >make -j 1 Making all in config make[1]: Entering directory ` make[1]: Nothing to be done for `all'. make[1]: Leaving directory ` Making all in src make[1]: Entering directory ` GEN myconfig-final.hpp <= ../myconfig.hpp GEN config-features.hpp make all-recursive make[2]: Entering directory ` Making all in . make[3]: Entering directory ` CXX config-features.lo CXX cells.lo CXX collision.lo CXX communication.lo communication.cpp: In function 'void mpi_external_potential_broadcast(int)': communication.cpp:2929:31: warning: unused variable 'e' [-Wunused-variable] CXX comfixed.lo CXX comforce.lo CXX constraint.lo CXX cuda_interface.lo CXX debug.lo CXX domain_decomposition.lo CXX electrokinetics_pdb_parse.lo CXX energy.lo CXX external_potential.lo external_potential.cpp: In function 'int lattice_read_file(Lattice*, char*)': external_potential.cpp:176:46: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] CXX errorhandling.lo CXX fft.lo CXX fft-common.lo CXX fft-dipolar.lo CXX forcecap.lo CXX forces.lo CXX galilei.lo CXX ghosts.lo CXX global.lo CXX grid.lo CXX halo.lo CXX iccp3m.lo CXX imd.lo CXX initialize.lo CXX integrate.lo CXX interaction_data.lo CXX lattice.lo lattice.cpp: In function 'void lattice_interpolate_linear_gradient(Lattice*, double*, double*)': lattice.cpp:151:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:156:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:163:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:170:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:177:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:184:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:191:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:198:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:205:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:145:11: warning: unused variable 'w' [-Wunused-variable] lattice.cpp:145:17: warning: unused variable 'wd' [-Wunused-variable] lattice.cpp:146:12: warning: unused variable 'temp_index' [-Wunused-variable] lattice.cpp: In function 'void lattice_interpolate_linear(Lattice*, double*, double*)': lattice.cpp:253:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:260:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:234:12: warning: unused variable 'temp_index' [-Wunused-variable] CXX layered.lo CXX lb.lo CXX lb-boundaries.lo CXX lbgpu.lo CXX metadynamics.lo CXX modes.lo CXX molforces.lo CXX mol_cut.lo CXX nemd.lo CXX nsquare.lo CXX particle_data.lo CXX polymer.lo CXX pressure.lo CXX random.lo CXX rattle.lo CXX reaction.lo CXX rotation.lo CXX specfunc.lo CXX statistics.lo CXX statistics_chain.lo CXX statistics_cluster.lo CXX statistics_correlation.lo CXX statistics_fluid.lo CXX statistics_molecule.lo CXX statistics_observable.lo statistics_observable.cpp: In function 'int observable_calc_radial_density_profile(observable*)': statistics_observable.cpp:631:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_radial_flux_density_profile(observable*)': statistics_observable.cpp:683:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_flux_density_profile(observable*)': statistics_observable.cpp:765:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_particle_positions(observable*)': statistics_observable.cpp:801:16: warning: unused variable 'i' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_calc_particle_forces(observable*)': statistics_observable.cpp:821:16: warning: unused variable 'i' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_reset_average(observable*)': statistics_observable.cpp:885:9: warning: unused variable 'error' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_calculate(observable*)': statistics_observable.cpp:41:10: warning: 'temp' may be used uninitialized in this function [-Wmaybe-uninitialized] statistics_observable.cpp: In function 'int observable_update(observable*)': statistics_observable.cpp:49:10: warning: 'temp' may be used uninitialized in this function [-Wmaybe-uninitialized] CXX statistics_wallstuff.lo CXX thermostat.lo CXX topology.lo CXX tuning.lo CXX uwerr.lo CXX verlet.lo CXX virtual_sites.lo CXX virtual_sites_com.lo CXX virtual_sites_relative.lo CXX vmdsock.lo CXX ghmc.lo CXX EspressoSystemInterface.lo CXX bmhtf-nacl.lo CXX buckingham.lo CXX dpd.lo CXX gaussian.lo CXX gb.lo CXX hat.lo CXX hertzian.lo CXX lj.lo CXX ljangle.lo CXX ljcos.lo CXX ljcos2.lo CXX ljgen.lo CXX morse.lo CXX soft_sphere.lo CXX steppot.lo CXX tab.lo CXX tunable_slip.lo CXX angle.lo CXX angle_harmonic.lo CXX angle_cosine.lo CXX angle_cossquare.lo CXX angledist.lo CXX dihedral.lo CXX endangledist.lo CXX fene.lo CXX harmonic.lo CXX overlap.lo CXX subt_lj.lo CXX object-in-fluid/area_force_local.lo CXX object-in-fluid/area_force_global.lo CXX object-in-fluid/bending_force.lo CXX object-in-fluid/stretching_force.lo CXX object-in-fluid/stretchlin_force.lo CXX object-in-fluid/volume_force.lo CXX debye_hueckel.lo CXX elc.lo CXX magnetic_non_p3m_methods.lo CXX mdlc_correction.lo CXX maggs.lo CXX mmm1d.lo CXX mmm2d.lo CXX mmm-common.lo CXX p3m.lo CXX p3m-common.lo CXX p3m-dipolar.lo CXX reaction_field.lo NVCC cuda_init_cuda.lo NVCC cuda_common_cuda.lo NVCC electrokinetics_cuda.lo NVCC lbgpu_cuda.lo lbgpu_cuda.cu(3567): error: identifier "get_interpolated_velocity" is undefined 1 error detected in the compilation of "/tmp/tmpxft_00000ce0_00000000-6_lbgpu_cuda.cpp1.ii". make[3]: *** [lbgpu_cuda.lo] Error 1 make[3]: Leaving directory ` make[2]: *** [all-recursive] Error 1 make[2]: Leaving directory ` make[1]: *** [all] Error 2 make[1]: Leaving directory ` make: *** [all-recursive] Error 1 + exit 1 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE Archiving artifacts From MAILER-DAEMON Mon May 19 08:47:36 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WmMye-0003jU-5V for mharc-espressomd-maintainer@gnu.org; Mon, 19 May 2014 08:47:36 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:58293) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WmMyV-0003jC-Bl for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 08:47:34 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WmMyO-0001dL-E1 for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 08:47:27 -0400 Received: from charon-out.rus.uni-stuttgart.de ([2001:7c0:2041:25::1:1]:36892 helo=charon.rus.uni-stuttgart.de) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WmMyO-0001dB-6d for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 08:47:20 -0400 Received: from localhost (localhost [127.0.0.1]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP id 983A35FE0F for ; Mon, 19 May 2014 14:47:18 +0200 (CEST) X-Virus-Scanned: by amavisd-new at charon.rus.uni-stuttgart.de Received: from charon.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (charon.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id aVB3aSgyo06x for ; Mon, 19 May 2014 14:47:14 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (mailrelay.icp.uni-stuttgart.de [129.69.120.76]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Mon, 19 May 2014 14:47:14 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 27CFFA40F1 for ; Mon, 19 May 2014 14:47:14 +0200 (CEST) Date: Mon, 19 May 2014 14:47:14 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <253509870.12.1400503634124.JavaMail.jenkins@elk> In-Reply-To: <1766421331.11.1400490965277.JavaMail.jenkins@elk> References: <1766421331.11.1400490965277.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-build-check X-Jenkins-Result: SUCCESS X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2001:7c0:2041:25::1:1 Subject: [Espressomd-maintainer] Jenkins build is back to normal : master-build-check #167 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Mon, 19 May 2014 12:47:34 -0000 See From MAILER-DAEMON Mon May 19 08:49:45 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WmN0j-00041s-2M for mharc-espressomd-maintainer@gnu.org; Mon, 19 May 2014 08:49:45 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:58633) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WmN0a-0003uw-Io for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 08:49:44 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WmN0R-0001uT-7c for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 08:49:36 -0400 Received: from hydra.rus.uni-stuttgart.de ([129.69.192.3]:38808) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WmN0R-0001uI-0u for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 08:49:27 -0400 Received: from localhost (localhost [127.0.0.1]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP id 2867412C76C for ; Mon, 19 May 2014 14:49:26 +0200 (CEST) X-Virus-Scanned: by amavisd-new at hydra.rus.uni-stuttgart.de Received: from hydra.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (hydra.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id wbtG5L4rA_vF for ; Mon, 19 May 2014 14:49:21 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (anoa.ica1.uni-stuttgart.de [129.69.120.76]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Mon, 19 May 2014 14:49:21 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id AEE6AA40EE for ; Mon, 19 May 2014 14:49:21 +0200 (CEST) Date: Mon, 19 May 2014 14:49:21 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1912735736.13.1400503761682.JavaMail.jenkins@elk> In-Reply-To: <1313720814.2.1400261342603.JavaMail.jenkins@elk> References: <1313720814.2.1400261342603.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-python-interface X-Jenkins-Result: SUCCESS X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.3 Subject: [Espressomd-maintainer] Jenkins build is back to normal : master-python-interface #110 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Mon, 19 May 2014 12:49:44 -0000 See From MAILER-DAEMON Mon May 19 08:52:44 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WmN3c-0005Yy-21 for mharc-espressomd-maintainer@gnu.org; Mon, 19 May 2014 08:52:44 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:59209) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WmN3T-0005Uk-HT for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 08:52:42 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WmN3M-0003OO-JR for espressomd-maintainer@nongnu.org; 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X-Received-From: 2001:7c0:2041:25::1:4 Subject: [Espressomd-maintainer] Jenkins build is back to normal : master-nightly-debug #72 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Mon, 19 May 2014 12:52:42 -0000 See From MAILER-DAEMON Mon May 19 08:54:09 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WmN4z-0005cj-93 for mharc-espressomd-maintainer@gnu.org; Mon, 19 May 2014 08:54:09 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:59532) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WmN4q-0005bj-Ux for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 08:54:07 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WmN4k-0003dL-Hg for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 08:54:00 -0400 Received: from charon-out.rus.uni-stuttgart.de ([2001:7c0:2041:25::1:1]:41480 helo=charon.rus.uni-stuttgart.de) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WmN4k-0003dG-2A for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 08:53:54 -0400 Received: from localhost (localhost [127.0.0.1]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP id 22BD95FDC9 for ; Mon, 19 May 2014 14:53:53 +0200 (CEST) X-Virus-Scanned: by amavisd-new at charon.rus.uni-stuttgart.de Received: from charon.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (charon.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id byiT8-Ng4M1b for ; Mon, 19 May 2014 14:53:48 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (icp.uni-stuttgart.de [129.69.120.76]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Mon, 19 May 2014 14:53:48 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 4E8FEA40EE for ; Mon, 19 May 2014 14:53:48 +0200 (CEST) Date: Mon, 19 May 2014 14:53:48 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1371320249.15.1400504028284.JavaMail.jenkins@elk> In-Reply-To: <1501864032.7.1400280962879.JavaMail.jenkins@elk> References: <1501864032.7.1400280962879.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-nightly-distcheck X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2001:7c0:2041:25::1:1 Subject: [Espressomd-maintainer] Build failed in Jenkins: master-nightly-distcheck #77 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Mon, 19 May 2014 12:54:07 -0000 See Changes: [Stefan Kesselheim] added missing get_interpolated_velocity function ------------------------------------------ [...truncated 861 lines...] platform detected = x86_64-unknown-linux-gnu package version = 3.2.0-981-g2dafa32 development sources = no Compiler -------- compiler = mpic++ linker = /usr/x86_64-suse-linux/bin/ld -m elf_x86_64 c++ compiler flags = -Wall -O5 c++ preprocessor flags = linker flags = -L/usr/local/cuda/lib64 libraries = -ltcl8.5 -lcufft -lcudart -lfftw3 -lm using debug flags = using profiling flags = Libraries --------- FFTW = yes efence = no Cuda ---- CUDA compiler = /usr/local/cuda/bin/nvcc CUDA flags = --ptxas-options=-v -gencode arch=compute_20,code=compute_20 Tcl/Tk ------ Tcl version = tcl8.5 Tk version = none Python ------ python = /usr/local/bin/python -B build python interface = no Other settings -------------- config = myconfig.hpp installation prefix = number of test tasks = 8 mympiexec = mpiexec = /usr/lib64/mpi/gcc/openmpi/bin/mpiexec pdflatex = /usr/bin/pdflatex makeindex = /usr/bin/makeindex bibtex = /usr/bin/bibtex doxygen = /usr/bin/doxygen dot = /usr/bin/dot Not building Python interface. make[1]: Entering directory ` Making all in config make[2]: Entering directory ` make[2]: Nothing to be done for `all'. make[2]: Leaving directory ` Making all in src make[2]: Entering directory ` GEN myconfig-final.hpp <= ../../src/myconfig-default.hpp make all-recursive make[3]: Entering directory ` Making all in . make[4]: Entering directory ` CXX config-features.lo CXX cells.lo CXX collision.lo CXX communication.lo ../../src/communication.cpp: In function 'void mpi_external_potential_broadcast(int)': ../../src/communication.cpp:2929:31: warning: unused variable 'e' [-Wunused-variable] CXX comfixed.lo CXX comforce.lo CXX constraint.lo CXX cuda_interface.lo CXX debug.lo CXX domain_decomposition.lo CXX electrokinetics_pdb_parse.lo CXX energy.lo CXX external_potential.lo ../../src/external_potential.cpp: In function 'int lattice_read_file(Lattice*, char*)': ../../src/external_potential.cpp:176:46: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] CXX errorhandling.lo CXX fft.lo CXX fft-common.lo CXX fft-dipolar.lo CXX forcecap.lo CXX forces.lo CXX galilei.lo CXX ghosts.lo CXX global.lo CXX grid.lo CXX halo.lo CXX iccp3m.lo CXX imd.lo CXX initialize.lo CXX integrate.lo CXX interaction_data.lo CXX lattice.lo ../../src/lattice.cpp: In function 'void lattice_interpolate_linear_gradient(Lattice*, double*, double*)': ../../src/lattice.cpp:151:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/lattice.cpp:156:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/lattice.cpp:163:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/lattice.cpp:170:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/lattice.cpp:177:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/lattice.cpp:184:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/lattice.cpp:191:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/lattice.cpp:198:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/lattice.cpp:205:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/lattice.cpp:145:11: warning: unused variable 'w' [-Wunused-variable] ../../src/lattice.cpp:145:17: warning: unused variable 'wd' [-Wunused-variable] ../../src/lattice.cpp:146:12: warning: unused variable 'temp_index' [-Wunused-variable] ../../src/lattice.cpp: In function 'void lattice_interpolate_linear(Lattice*, double*, double*)': ../../src/lattice.cpp:253:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/lattice.cpp:260:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/lattice.cpp:234:12: warning: unused variable 'temp_index' [-Wunused-variable] CXX layered.lo CXX lb.lo CXX lb-boundaries.lo CXX lbgpu.lo CXX metadynamics.lo CXX modes.lo CXX molforces.lo CXX mol_cut.lo CXX nemd.lo CXX nsquare.lo CXX particle_data.lo CXX polymer.lo CXX pressure.lo CXX random.lo CXX rattle.lo CXX reaction.lo CXX rotation.lo CXX specfunc.lo CXX statistics.lo CXX statistics_chain.lo CXX statistics_cluster.lo CXX statistics_correlation.lo CXX statistics_fluid.lo CXX statistics_molecule.lo CXX statistics_observable.lo ../../src/statistics_observable.cpp: In function 'int observable_calc_radial_density_profile(observable*)': ../../src/statistics_observable.cpp:631:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/statistics_observable.cpp: In function 'int observable_calc_radial_flux_density_profile(observable*)': ../../src/statistics_observable.cpp:683:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/statistics_observable.cpp: In function 'int observable_calc_flux_density_profile(observable*)': ../../src/statistics_observable.cpp:765:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/statistics_observable.cpp: In function 'int observable_calc_particle_positions(observable*)': ../../src/statistics_observable.cpp:801:16: warning: unused variable 'i' [-Wunused-variable] ../../src/statistics_observable.cpp: In function 'int observable_calc_particle_forces(observable*)': ../../src/statistics_observable.cpp:821:16: warning: unused variable 'i' [-Wunused-variable] ../../src/statistics_observable.cpp: In function 'int observable_reset_average(observable*)': ../../src/statistics_observable.cpp:885:9: warning: unused variable 'error' [-Wunused-variable] ../../src/statistics_observable.cpp: In function 'int observable_calculate(observable*)': ../../src/statistics_observable.cpp:41:10: warning: 'temp' may be used uninitialized in this function [-Wmaybe-uninitialized] ../../src/statistics_observable.cpp: In function 'int observable_update(observable*)': ../../src/statistics_observable.cpp:49:10: warning: 'temp' may be used uninitialized in this function [-Wmaybe-uninitialized] CXX statistics_wallstuff.lo CXX thermostat.lo CXX topology.lo CXX tuning.lo CXX uwerr.lo CXX verlet.lo CXX virtual_sites.lo CXX virtual_sites_com.lo CXX virtual_sites_relative.lo CXX vmdsock.lo CXX ghmc.lo CXX EspressoSystemInterface.lo CXX bmhtf-nacl.lo CXX buckingham.lo CXX dpd.lo CXX gaussian.lo CXX gb.lo CXX hat.lo CXX hertzian.lo CXX lj.lo CXX ljangle.lo CXX ljcos.lo CXX ljcos2.lo CXX ljgen.lo CXX morse.lo CXX soft_sphere.lo CXX steppot.lo CXX tab.lo CXX tunable_slip.lo CXX angle.lo CXX angle_harmonic.lo CXX angle_cosine.lo CXX angle_cossquare.lo CXX angledist.lo CXX dihedral.lo CXX endangledist.lo CXX fene.lo CXX harmonic.lo CXX overlap.lo CXX subt_lj.lo CXX object-in-fluid/area_force_local.lo CXX object-in-fluid/area_force_global.lo CXX object-in-fluid/bending_force.lo CXX object-in-fluid/stretching_force.lo CXX object-in-fluid/stretchlin_force.lo CXX object-in-fluid/volume_force.lo CXX debye_hueckel.lo CXX elc.lo CXX magnetic_non_p3m_methods.lo CXX mdlc_correction.lo CXX maggs.lo CXX mmm1d.lo CXX mmm2d.lo CXX mmm-common.lo CXX p3m.lo CXX p3m-common.lo CXX p3m-dipolar.lo CXX reaction_field.lo NVCC cuda_init_cuda.lo NVCC cuda_common_cuda.lo NVCC electrokinetics_cuda.lo NVCC lbgpu_cuda.lo NVCC p3m_gpu_cuda.lo NVCC EspressoSystemInterface_cuda.lo NVCC HarmonicForce.lo GEN config-version.cpp CXX config-version.lo CXXLD libEspresso.la make[4]: Leaving directory ` Making all in tcl make[4]: Entering directory ` CXX bin_tcl.lo CXX binary_file_tcl.lo CXX blockfile_tcl.lo CXX cells_tcl.lo CXX channels_tcl.lo CXX collision_tcl.lo CXX comfixed_tcl.lo CXX comforce_tcl.lo CXX config_tcl.lo CXX constraint_tcl.lo ../../../src/tcl/constraint_tcl.cpp:28:31: fatal error: TclOutputHelper.hpp: No such file or directory compilation terminated. make[4]: *** [constraint_tcl.lo] Error 1 make[4]: Leaving directory ` make[3]: *** [all-recursive] Error 1 make[3]: Leaving directory ` make[2]: *** [all] Error 2 make[2]: Leaving directory ` make[1]: *** [all-recursive] Error 1 make[1]: Leaving directory ` make: *** [distcheck] Error 1 + exit 1 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE Archiving artifacts From MAILER-DAEMON Mon May 19 08:56:48 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WmN7X-0005yR-Up for mharc-espressomd-maintainer@gnu.org; Mon, 19 May 2014 08:56:47 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:59958) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WmN7Q-0005y4-C1 for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 08:56:45 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WmN7L-0004dJ-1w for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 08:56:40 -0400 Received: from medousa-out.rus.uni-stuttgart.de ([2001:7c0:2041:25::1:4]:60165 helo=medousa.rus.uni-stuttgart.de) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WmN7K-0004d9-IG for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 08:56:34 -0400 Received: from localhost (localhost [127.0.0.1]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP id E80FD37EED for ; Mon, 19 May 2014 14:56:33 +0200 (CEST) X-Virus-Scanned: by amavisd-new at medousa.rus.uni-stuttgart.de Received: from medousa.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (medousa.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id KWe9NeoHCiRa for ; Mon, 19 May 2014 14:56:28 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (anoa.ica1.uni-stuttgart.de [129.69.120.76]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Mon, 19 May 2014 14:56:28 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id B1BE9A40F1 for ; Mon, 19 May 2014 14:56:28 +0200 (CEST) Date: Mon, 19 May 2014 14:56:28 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1668695914.17.1400504188688.JavaMail.jenkins@elk> In-Reply-To: <81632896.3.1399947651622.JavaMail.jenkins@elk> References: <81632896.3.1399947651622.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: maxset,nompi X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2001:7c0:2041:25::1:4 Subject: [Espressomd-maintainer] =?utf-8?q?Build_failed_in_Jenkins=3A_mast?= =?utf-8?q?er-nightly-multiconfig_=C2=BB_maxset=2Cnompi_=2387?= X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Mon, 19 May 2014 12:56:46 -0000 See Changes: [Stefan Kesselheim] added missing get_interpolated_velocity function ------------------------------------------ [...truncated 172 lines...] checking for unistd.h... (cached) yes **************************************************************** * Checking for standard functions * **************************************************************** checking for stdlib.h... (cached) yes checking for GNU libc compatible malloc... yes checking for working memcmp... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible realloc... yes checking sys/select.h usability... yes checking sys/select.h presence... yes checking for sys/select.h... yes checking for sys/socket.h... (cached) yes checking types of arguments for select... int,fd_set *,struct timeval * checking for size_t... yes checking for working strtod... yes checking for atexit... yes checking for floor... yes checking for getcwd... yes checking for gethostbyname... yes checking for memset... yes checking for pow... yes checking for rint... yes checking for select... yes checking for socket... yes checking for sqrt... yes **************************************************************** * Checking for required tools and libraries * **************************************************************** checking whether to use FFTW... yes checking for library containing fftw_plan_many_dft... -lfftw3 checking fftw3.h usability... yes checking fftw3.h presence... yes checking for fftw3.h... yes checking whether to use CUDA... yes checking for nvcc... /usr/local/cuda/bin/nvcc checking if /usr/local/cuda/bin/nvcc supports -c -o file.o... no checking if /usr/local/cuda/bin/nvcc supports -c -o file.o... (cached) no checking whether the /usr/local/cuda/bin/nvcc linker (/usr/x86_64-suse-linux/bin/ld -m elf_x86_64) supports shared libraries... yes checking how to hardcode library paths into programs... immediate checking for libcudart... yes checking for libcufft... yes checking whether CUDA compiles... yes checking whether CUDA runs... yes **************************************************************** * Checking for Python * **************************************************************** checking for a Python interpreter with version >= 2.5... python checking for python... /usr/local/bin/python checking for python version... 2.7 checking for python platform... linux2 checking for python script directory... ${prefix}/lib/python2.7/site-packages checking for python extension module directory... ${exec_prefix}/lib/python2.7/site-packages checking whether python -B works... yes checking whether to build the python interface... no **************************************************************** * Checking for Tcl/Tk * **************************************************************** checking whether to build the Tcl interface... yes checking for libtcl8.6... no checking for libtcl8.5... yes checking for tcl.h... yes checking whether to use Tk... yes **************************************************************** * Other settings * **************************************************************** checking whether to use efence... no checking whether the variable MYCONFIG is set... no checking the number of available CPUs... 8 **************************************************************** * Creating output files * **************************************************************** checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating config/Makefile config.status: creating config/myconfig-sample-header.hpp config.status: creating src/Makefile config.status: creating src/tcl/Makefile config.status: creating src/python/Makefile config.status: creating src/python/espresso/Makefile config.status: creating tools/Makefile config.status: creating scripts/Makefile config.status: creating testsuite/Makefile config.status: creating doc/Makefile config.status: creating doc/logo/Makefile config.status: creating doc/ug/Makefile config.status: creating doc/dg/Makefile config.status: creating doc/doxygen/Makefile config.status: creating doc/tutorials/Makefile config.status: creating doc/tutorials/01-lennard_jones/Makefile config.status: creating doc/tutorials/02-charged_system/Makefile config.status: creating doc/tutorials/03-object_in_fluid/Makefile config.status: creating doc/latexit.sh config.status: creating testsuite/runtest.sh config.status: creating tools/es_mpiexec config.status: creating src/python/pypresso config.status: creating src/acconfig.hpp config.status: executing depfiles commands config.status: executing libtool commands config.status: executing myconfig-sample.hpp commands **************************************************************** * Configuration summary * **************************************************************** platform detected = x86_64-unknown-linux-gnu package version = 3.2.0-981-g2dafa32 development sources = yes Compiler -------- compiler = g++ linker = /usr/x86_64-suse-linux/bin/ld -m elf_x86_64 c++ compiler flags = -Wall -O5 c++ preprocessor flags = linker flags = -L/usr/local/cuda/lib64 libraries = -ltcl8.5 -lcufft -lcudart -lfftw3 -lm using debug flags = using profiling flags = Libraries --------- FFTW = yes efence = no Cuda ---- CUDA compiler = /usr/local/cuda/bin/nvcc CUDA flags = --ptxas-options=-v -gencode arch=compute_20,code=compute_20 Tcl/Tk ------ Tcl version = tcl8.5 Tk version = none Python ------ python = /usr/local/bin/python -B build python interface = no Other settings -------------- config = myconfig.hpp installation prefix = /home/jenkins/Espresso number of test tasks = 8 mympiexec = mpiexec = pdflatex = /usr/bin/pdflatex makeindex = /usr/bin/makeindex bibtex = /usr/bin/bibtex doxygen = /usr/bin/doxygen dot = /usr/bin/dot WARNING: MPI disabled or not supported! Parallelization turned off. Not building Python interface. END CONFIGURE + maintainer/jenkins/build.sh 12283 (process ID) old priority 0, new priority 5 srcdir= builddir= insource=true parallelism=nompi START BUILD myconfig=maxset build_procs=4 Copying maxset.hpp to >make -j 4 Making all in config make[1]: Entering directory ` make[1]: Nothing to be done for `all'. make[1]: Leaving directory ` Making all in src make[1]: Entering directory ` GEN config-features.hpp GEN myconfig-final.hpp <= ../myconfig.hpp GEN config-features.cpp make all-recursive make[2]: Entering directory ` Making all in . make[3]: Entering directory ` CXX cells.lo CXX config-features.lo CXX collision.lo CXX communication.lo CXX comfixed.lo CXX comforce.lo CXX constraint.lo CXX cuda_interface.lo communication.cpp: In function 'void mpi_external_potential_broadcast(int)': communication.cpp:2929:31: warning: unused variable 'e' [-Wunused-variable] CXX debug.lo CXX domain_decomposition.lo CXX electrokinetics_pdb_parse.lo CXX energy.lo CXX external_potential.lo CXX errorhandling.lo external_potential.cpp: In function 'int lattice_read_file(Lattice*, char*)': external_potential.cpp:176:46: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] CXX fft.lo CXX fft-common.lo CXX fft-dipolar.lo CXX forcecap.lo CXX forces.lo CXX galilei.lo CXX ghosts.lo CXX global.lo CXX grid.lo CXX halo.lo CXX iccp3m.lo CXX imd.lo CXX initialize.lo CXX integrate.lo CXX interaction_data.lo CXX lattice.lo lattice.cpp: In function 'void lattice_interpolate_linear_gradient(Lattice*, double*, double*)': lattice.cpp:151:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:156:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:163:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:170:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:177:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:184:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:191:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:198:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:205:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:145:11: warning: unused variable 'w' [-Wunused-variable] lattice.cpp:145:17: warning: unused variable 'wd' [-Wunused-variable] lattice.cpp:146:12: warning: unused variable 'temp_index' [-Wunused-variable] lattice.cpp: In function 'void lattice_interpolate_linear(Lattice*, double*, double*)': lattice.cpp:253:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:260:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:234:12: warning: unused variable 'temp_index' [-Wunused-variable] CXX layered.lo CXX lb.lo CXX lb-boundaries.lo lb.cpp: In function 'void lb_prepare_communication()': lb.cpp:1755:54: error: 'MPI_Type_get_extent' was not declared in this scope lb.cpp:1758:75: error: 'MPI_Type_create_hvector' was not declared in this scope make[3]: *** [lb.lo] Error 1 make[3]: *** Waiting for unfinished jobs.... make[3]: Leaving directory ` make[2]: *** [all-recursive] Error 1 make[2]: Leaving directory ` make[1]: *** [all] Error 2 make[1]: Leaving directory ` make: *** [all-recursive] Error 1 + exit 1 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE From MAILER-DAEMON Mon May 19 08:57:03 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WmN7n-0005z9-2H for mharc-espressomd-maintainer@gnu.org; Mon, 19 May 2014 08:57:03 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:60038) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WmN7f-0005yo-55 for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 08:57:01 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WmN7Y-0004i3-KY for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 08:56:55 -0400 Received: from hydra.rus.uni-stuttgart.de ([129.69.192.3]:40095) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WmN7Y-0004hp-Bp for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 08:56:48 -0400 Received: from localhost (localhost [127.0.0.1]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP id 62CE012C6D5 for ; Mon, 19 May 2014 14:56:47 +0200 (CEST) X-Virus-Scanned: by amavisd-new at hydra.rus.uni-stuttgart.de Received: from hydra.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (hydra.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id 11rtt9XXg3HZ for ; Mon, 19 May 2014 14:56:42 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (smtp.icp.uni-stuttgart.de [129.69.120.76]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Mon, 19 May 2014 14:56:42 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 85656A40F1 for ; Mon, 19 May 2014 14:56:42 +0200 (CEST) Date: Mon, 19 May 2014 14:56:42 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1487999493.19.1400504202453.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: shanchen,3core X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.3 Subject: [Espressomd-maintainer] =?utf-8?q?Build_failed_in_Jenkins=3A_mast?= =?utf-8?q?er-nightly-multiconfig_=C2=BB_shanchen=2C3core_=2387?= X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Mon, 19 May 2014 12:57:01 -0000 See Changes: [Stefan Kesselheim] added missing get_interpolated_velocity function ------------------------------------------ [...truncated 272 lines...] config.status: creating src/acconfig.hpp config.status: executing depfiles commands config.status: executing libtool commands config.status: executing myconfig-sample.hpp commands **************************************************************** * Configuration summary * **************************************************************** platform detected = x86_64-unknown-linux-gnu package version = 3.2.0-981-g2dafa32 development sources = yes Compiler -------- compiler = mpic++ linker = /usr/x86_64-suse-linux/bin/ld -m elf_x86_64 c++ compiler flags = -Wall -O5 c++ preprocessor flags = linker flags = -L/usr/local/cuda/lib64 libraries = -ltcl8.5 -lcufft -lcudart -lfftw3 -lm using debug flags = using profiling flags = Libraries --------- FFTW = yes efence = no Cuda ---- CUDA compiler = /usr/local/cuda/bin/nvcc CUDA flags = --ptxas-options=-v -gencode arch=compute_20,code=compute_20 Tcl/Tk ------ Tcl version = tcl8.5 Tk version = none Python ------ python = /usr/local/bin/python -B build python interface = no Other settings -------------- config = myconfig.hpp installation prefix = /home/jenkins/Espresso number of test tasks = 8 mympiexec = mpiexec = /usr/lib64/mpi/gcc/openmpi/bin/mpiexec pdflatex = /usr/bin/pdflatex makeindex = /usr/bin/makeindex bibtex = /usr/bin/bibtex doxygen = /usr/bin/doxygen dot = /usr/bin/dot Not building Python interface. END CONFIGURE + maintainer/jenkins/build.sh 26805 (process ID) old priority 0, new priority 5 srcdir= builddir= insource=true parallelism=3core START BUILD myconfig=shanchen build_procs=4 Copying shanchen.hpp to >make -j 4 Making all in config make[1]: Entering directory ` make[1]: Nothing to be done for `all'. make[1]: Leaving directory ` Making all in src make[1]: Entering directory ` GEN config-features.hpp GEN myconfig-final.hpp <= ../myconfig.hpp GEN config-features.cpp make all-recursive make[2]: Entering directory ` Making all in . make[3]: Entering directory ` CXX cells.lo CXX config-features.lo CXX collision.lo CXX communication.lo CXX comfixed.lo CXX comforce.lo CXX constraint.lo CXX cuda_interface.lo CXX debug.lo CXX domain_decomposition.lo communication.cpp: In function 'void mpi_external_potential_broadcast(int)': communication.cpp:2929:31: warning: unused variable 'e' [-Wunused-variable] CXX electrokinetics_pdb_parse.lo CXX energy.lo CXX external_potential.lo CXX errorhandling.lo external_potential.cpp: In function 'int lattice_read_file(Lattice*, char*)': external_potential.cpp:176:46: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] CXX fft.lo CXX fft-common.lo CXX fft-dipolar.lo CXX forcecap.lo CXX forces.lo CXX galilei.lo CXX ghosts.lo CXX global.lo CXX grid.lo CXX halo.lo CXX iccp3m.lo CXX imd.lo CXX initialize.lo CXX integrate.lo CXX interaction_data.lo CXX lattice.lo CXX layered.lo lattice.cpp: In function 'void lattice_interpolate_linear_gradient(Lattice*, double*, double*)': lattice.cpp:151:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:156:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:163:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:170:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:177:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:184:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:191:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:198:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:205:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:145:11: warning: unused variable 'w' [-Wunused-variable] lattice.cpp:145:17: warning: unused variable 'wd' [-Wunused-variable] lattice.cpp:146:12: warning: unused variable 'temp_index' [-Wunused-variable] lattice.cpp: In function 'void lattice_interpolate_linear(Lattice*, double*, double*)': lattice.cpp:253:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:260:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:234:12: warning: unused variable 'temp_index' [-Wunused-variable] CXX lb.lo CXX lb-boundaries.lo CXX lbgpu.lo CXX metadynamics.lo CXX modes.lo CXX molforces.lo CXX mol_cut.lo CXX nemd.lo CXX nsquare.lo CXX particle_data.lo CXX polymer.lo CXX pressure.lo CXX random.lo CXX rattle.lo CXX reaction.lo CXX rotation.lo CXX specfunc.lo CXX statistics.lo CXX statistics_chain.lo CXX statistics_cluster.lo CXX statistics_correlation.lo CXX statistics_fluid.lo CXX statistics_molecule.lo CXX statistics_observable.lo CXX statistics_wallstuff.lo statistics_observable.cpp: In function 'int observable_calc_radial_density_profile(observable*)': statistics_observable.cpp:631:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_radial_flux_density_profile(observable*)': statistics_observable.cpp:683:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_flux_density_profile(observable*)': statistics_observable.cpp:765:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_particle_positions(observable*)': statistics_observable.cpp:801:16: warning: unused variable 'i' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_calc_particle_forces(observable*)': statistics_observable.cpp:821:16: warning: unused variable 'i' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_reset_average(observable*)': statistics_observable.cpp:885:9: warning: unused variable 'error' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_calculate(observable*)': statistics_observable.cpp:41:10: warning: 'temp' may be used uninitialized in this function [-Wmaybe-uninitialized] statistics_observable.cpp: In function 'int observable_update(observable*)': statistics_observable.cpp:49:10: warning: 'temp' may be used uninitialized in this function [-Wmaybe-uninitialized] CXX thermostat.lo CXX topology.lo CXX tuning.lo CXX uwerr.lo CXX verlet.lo CXX virtual_sites.lo CXX virtual_sites_com.lo CXX virtual_sites_relative.lo CXX vmdsock.lo CXX ghmc.lo CXX EspressoSystemInterface.lo CXX bmhtf-nacl.lo CXX buckingham.lo CXX dpd.lo CXX gaussian.lo CXX gb.lo CXX hat.lo CXX hertzian.lo CXX lj.lo CXX ljangle.lo CXX ljcos.lo CXX ljcos2.lo CXX ljgen.lo CXX morse.lo CXX soft_sphere.lo CXX steppot.lo CXX tab.lo CXX tunable_slip.lo CXX angle.lo CXX angle_harmonic.lo CXX angle_cosine.lo CXX angle_cossquare.lo CXX angledist.lo CXX dihedral.lo CXX endangledist.lo CXX fene.lo CXX harmonic.lo CXX overlap.lo CXX subt_lj.lo CXX debye_hueckel.lo CXX elc.lo CXX magnetic_non_p3m_methods.lo CXX mdlc_correction.lo CXX maggs.lo CXX mmm1d.lo CXX mmm2d.lo CXX mmm-common.lo CXX p3m.lo CXX p3m-common.lo CXX p3m-dipolar.lo CXX reaction_field.lo NVCC cuda_init_cuda.lo NVCC cuda_common_cuda.lo NVCC electrokinetics_cuda.lo NVCC lbgpu_cuda.lo lbgpu_cuda.cu(3585): error: identifier "d_v" is undefined lbgpu_cuda.cu(3527): warning: variable "delta" was set but never used lbgpu_cuda.cu(3531): warning: variable "Rho" was declared but never referenced 1 error detected in the compilation of "/tmp/tmpxft_00007287_00000000-6_lbgpu_cuda.cpp1.ii". make[3]: *** [lbgpu_cuda.lo] Error 1 make[3]: *** Waiting for unfinished jobs.... make[3]: Leaving directory ` make[2]: *** [all-recursive] Error 1 make[2]: Leaving directory ` make[1]: *** [all] Error 2 make[1]: Leaving directory ` make: *** [all-recursive] Error 1 + exit 1 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE From MAILER-DAEMON Mon May 19 08:57:27 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WmN8B-00061a-C7 for mharc-espressomd-maintainer@gnu.org; Mon, 19 May 2014 08:57:27 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:60116) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WmN82-00061B-0R for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 08:57:25 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WmN7v-0004oP-7g for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 08:57:17 -0400 Received: from charon.rus.uni-stuttgart.de ([129.69.192.1]:37914) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WmN7v-0004oK-1B for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 08:57:11 -0400 Received: from localhost (localhost [127.0.0.1]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP id 2E09B5FD99 for ; Mon, 19 May 2014 14:57:10 +0200 (CEST) X-Virus-Scanned: by amavisd-new at charon.rus.uni-stuttgart.de Received: from charon.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (charon.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id BVVCYxsfAojn for ; Mon, 19 May 2014 14:55:41 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (mailrelay.icp.uni-stuttgart.de [129.69.120.76]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Mon, 19 May 2014 14:55:41 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id B5443A40EE for ; Mon, 19 May 2014 14:55:41 +0200 (CEST) Date: Mon, 19 May 2014 14:55:41 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <322691672.16.1400504141723.JavaMail.jenkins@elk> In-Reply-To: <1618478452.8.1400290865250.JavaMail.jenkins@elk> References: <1618478452.8.1400290865250.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-nightly-mpich X-Jenkins-Result: SUCCESS X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.1 Subject: [Espressomd-maintainer] Jenkins build is back to normal : master-nightly-mpich #75 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Mon, 19 May 2014 12:57:25 -0000 See From MAILER-DAEMON Mon May 19 08:57:37 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WmN8L-000626-Ev for mharc-espressomd-maintainer@gnu.org; Mon, 19 May 2014 08:57:37 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:60205) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WmN8E-00061o-BF for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 08:57:36 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WmN87-0004ry-Dw for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 08:57:30 -0400 Received: from medousa-out.rus.uni-stuttgart.de ([2001:7c0:2041:25::1:4]:59540 helo=medousa.rus.uni-stuttgart.de) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WmN86-0004ra-U2 for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 08:57:23 -0400 Received: from localhost (localhost [127.0.0.1]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP id 54FFC37EED for ; Mon, 19 May 2014 14:57:22 +0200 (CEST) X-Virus-Scanned: by amavisd-new at medousa.rus.uni-stuttgart.de Received: from medousa.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (medousa.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id HCDaLqxxHt-z for ; Mon, 19 May 2014 14:57:17 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (mailrelay.icp.uni-stuttgart.de [129.69.120.76]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Mon, 19 May 2014 14:57:17 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id BD20EA40F5 for ; Mon, 19 May 2014 14:57:17 +0200 (CEST) Date: Mon, 19 May 2014 14:57:17 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1761253450.22.1400504237769.JavaMail.jenkins@elk> In-Reply-To: <1568226074.2.1399947638338.JavaMail.jenkins@elk> References: <1568226074.2.1399947638338.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: shanchen,nompi X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2001:7c0:2041:25::1:4 Subject: [Espressomd-maintainer] =?utf-8?q?Build_failed_in_Jenkins=3A_mast?= =?utf-8?q?er-nightly-multiconfig_=C2=BB_shanchen=2Cnompi_=2387?= X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Mon, 19 May 2014 12:57:36 -0000 See Changes: [Stefan Kesselheim] added missing get_interpolated_velocity function ------------------------------------------ [...truncated 270 lines...] config.status: executing depfiles commands config.status: executing libtool commands config.status: executing myconfig-sample.hpp commands **************************************************************** * Configuration summary * **************************************************************** platform detected = x86_64-unknown-linux-gnu package version = 3.2.0-981-g2dafa32 development sources = yes Compiler -------- compiler = g++ linker = /usr/x86_64-suse-linux/bin/ld -m elf_x86_64 c++ compiler flags = -Wall -O5 c++ preprocessor flags = linker flags = -L/usr/local/cuda/lib64 libraries = -ltcl8.5 -lcufft -lcudart -lfftw3 -lm using debug flags = using profiling flags = Libraries --------- FFTW = yes efence = no Cuda ---- CUDA compiler = /usr/local/cuda/bin/nvcc CUDA flags = --ptxas-options=-v -gencode arch=compute_20,code=compute_20 Tcl/Tk ------ Tcl version = tcl8.5 Tk version = none Python ------ python = /usr/local/bin/python -B build python interface = no Other settings -------------- config = myconfig.hpp installation prefix = /home/jenkins/Espresso number of test tasks = 8 mympiexec = mpiexec = pdflatex = /usr/bin/pdflatex makeindex = /usr/bin/makeindex bibtex = /usr/bin/bibtex doxygen = /usr/bin/doxygen dot = /usr/bin/dot WARNING: MPI disabled or not supported! Parallelization turned off. Not building Python interface. END CONFIGURE + maintainer/jenkins/build.sh 9232 (process ID) old priority 0, new priority 5 srcdir= builddir= insource=true parallelism=nompi START BUILD myconfig=shanchen build_procs=4 Copying shanchen.hpp to >make -j 4 Making all in config make[1]: Entering directory ` make[1]: Nothing to be done for `all'. make[1]: Leaving directory ` Making all in src make[1]: Entering directory ` GEN config-features.hpp GEN myconfig-final.hpp <= ../myconfig.hpp GEN config-features.cpp make all-recursive make[2]: Entering directory ` Making all in . make[3]: Entering directory ` CXX cells.lo CXX config-features.lo CXX collision.lo CXX communication.lo CXX comfixed.lo CXX comforce.lo CXX constraint.lo CXX cuda_interface.lo CXX debug.lo CXX domain_decomposition.lo communication.cpp: In function 'void mpi_external_potential_broadcast(int)': communication.cpp:2929:31: warning: unused variable 'e' [-Wunused-variable] CXX electrokinetics_pdb_parse.lo CXX energy.lo CXX external_potential.lo external_potential.cpp: In function 'int lattice_read_file(Lattice*, char*)': external_potential.cpp:176:46: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] CXX errorhandling.lo CXX fft.lo CXX fft-common.lo CXX fft-dipolar.lo CXX forcecap.lo CXX forces.lo CXX galilei.lo CXX ghosts.lo CXX global.lo CXX grid.lo CXX halo.lo CXX iccp3m.lo CXX imd.lo CXX initialize.lo CXX integrate.lo CXX interaction_data.lo CXX lattice.lo lattice.cpp: In function 'void lattice_interpolate_linear_gradient(Lattice*, double*, double*)': lattice.cpp:151:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:156:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:163:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:170:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:177:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:184:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:191:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:198:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:205:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:145:11: warning: unused variable 'w' [-Wunused-variable] lattice.cpp:145:17: warning: unused variable 'wd' [-Wunused-variable] lattice.cpp:146:12: warning: unused variable 'temp_index' [-Wunused-variable] lattice.cpp: In function 'void lattice_interpolate_linear(Lattice*, double*, double*)': lattice.cpp:253:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:260:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:234:12: warning: unused variable 'temp_index' [-Wunused-variable] CXX layered.lo CXX lb.lo CXX lb-boundaries.lo CXX lbgpu.lo CXX metadynamics.lo CXX modes.lo CXX molforces.lo CXX mol_cut.lo CXX nemd.lo CXX nsquare.lo CXX particle_data.lo CXX polymer.lo CXX pressure.lo CXX random.lo CXX rattle.lo CXX reaction.lo CXX rotation.lo CXX specfunc.lo CXX statistics.lo CXX statistics_chain.lo CXX statistics_cluster.lo CXX statistics_correlation.lo CXX statistics_fluid.lo CXX statistics_molecule.lo CXX statistics_observable.lo CXX statistics_wallstuff.lo CXX thermostat.lo statistics_observable.cpp: In function 'int observable_calc_radial_density_profile(observable*)': statistics_observable.cpp:631:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_radial_flux_density_profile(observable*)': statistics_observable.cpp:683:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_flux_density_profile(observable*)': statistics_observable.cpp:765:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_particle_positions(observable*)': statistics_observable.cpp:801:16: warning: unused variable 'i' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_calc_particle_forces(observable*)': statistics_observable.cpp:821:16: warning: unused variable 'i' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_reset_average(observable*)': statistics_observable.cpp:885:9: warning: unused variable 'error' [-Wunused-variable] CXX topology.lo statistics_observable.cpp: In function 'int observable_calculate(observable*)': statistics_observable.cpp:41:10: warning: 'temp' may be used uninitialized in this function [-Wmaybe-uninitialized] statistics_observable.cpp: In function 'int observable_update(observable*)': statistics_observable.cpp:49:10: warning: 'temp' may be used uninitialized in this function [-Wmaybe-uninitialized] CXX tuning.lo CXX uwerr.lo CXX verlet.lo CXX virtual_sites.lo CXX virtual_sites_com.lo CXX virtual_sites_relative.lo CXX vmdsock.lo CXX ghmc.lo CXX EspressoSystemInterface.lo CXX bmhtf-nacl.lo CXX buckingham.lo CXX dpd.lo CXX gaussian.lo CXX gb.lo CXX hat.lo CXX hertzian.lo CXX lj.lo CXX ljangle.lo CXX ljcos.lo CXX ljcos2.lo CXX ljgen.lo CXX morse.lo CXX soft_sphere.lo CXX steppot.lo CXX tab.lo CXX tunable_slip.lo CXX angle.lo CXX angle_harmonic.lo CXX angle_cosine.lo CXX angle_cossquare.lo CXX angledist.lo CXX dihedral.lo CXX endangledist.lo CXX fene.lo CXX harmonic.lo CXX overlap.lo CXX subt_lj.lo CXX debye_hueckel.lo CXX elc.lo CXX magnetic_non_p3m_methods.lo CXX mdlc_correction.lo CXX maggs.lo CXX mmm1d.lo CXX mmm2d.lo CXX mmm-common.lo CXX p3m.lo CXX p3m-common.lo CXX p3m-dipolar.lo CXX reaction_field.lo NVCC cuda_init_cuda.lo NVCC cuda_common_cuda.lo NVCC electrokinetics_cuda.lo NVCC lbgpu_cuda.lo lbgpu_cuda.cu(3585): error: identifier "d_v" is undefined lbgpu_cuda.cu(3527): warning: variable "delta" was set but never used lbgpu_cuda.cu(3531): warning: variable "Rho" was declared but never referenced 1 error detected in the compilation of "/tmp/tmpxft_00002d71_00000000-6_lbgpu_cuda.cpp1.ii". make[3]: *** [lbgpu_cuda.lo] Error 1 make[3]: *** Waiting for unfinished jobs.... make[3]: Leaving directory ` make[2]: *** [all-recursive] Error 1 make[2]: Leaving directory ` make[1]: *** [all] Error 2 make[1]: Leaving directory ` make: *** [all-recursive] Error 1 + exit 1 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE From MAILER-DAEMON Mon May 19 08:57:37 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WmN8L-00062M-HE for mharc-espressomd-maintainer@gnu.org; Mon, 19 May 2014 08:57:37 -0400 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X-Received-From: 2001:7c0:2041:25::1:4 Subject: [Espressomd-maintainer] =?utf-8?q?Jenkins_build_became_unstable?= =?utf-8?q?=3A__master-nightly-multiconfig_=C2=BB_tunableslip=2C3core_=238?= =?utf-8?q?7?= X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Mon, 19 May 2014 12:58:45 -0000 See From MAILER-DAEMON Mon May 19 08:58:55 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WmN9b-0006Dy-KJ for mharc-espressomd-maintainer@gnu.org; Mon, 19 May 2014 08:58:55 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:60705) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WmN9U-0006DM-EK for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 08:58:53 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WmN9P-0005Ny-4c for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 08:58:48 -0400 Received: from medousa-out.rus.uni-stuttgart.de ([2001:7c0:2041:25::1:4]:36002 helo=medousa.rus.uni-stuttgart.de) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WmN9O-0005NL-N0 for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 08:58:43 -0400 Received: from localhost (localhost [127.0.0.1]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP id 19ED537EB5 for ; Mon, 19 May 2014 14:58:42 +0200 (CEST) X-Virus-Scanned: by amavisd-new at medousa.rus.uni-stuttgart.de Received: from medousa.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (medousa.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id 1XYjRIMTgzuq for ; Mon, 19 May 2014 14:57:12 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (imap.icp.uni-stuttgart.de [129.69.120.76]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Mon, 19 May 2014 14:57:12 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id D3BF3A40EE for ; Mon, 19 May 2014 14:57:12 +0200 (CEST) Date: Mon, 19 May 2014 14:57:12 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1644651019.20.1400504232852.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: molcut,nompi X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2001:7c0:2041:25::1:4 Subject: [Espressomd-maintainer] =?utf-8?q?Build_failed_in_Jenkins=3A_mast?= =?utf-8?q?er-nightly-multiconfig_=C2=BB_molcut=2Cnompi_=2387?= X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Mon, 19 May 2014 12:58:53 -0000 See Changes: [Stefan Kesselheim] added missing get_interpolated_velocity function ------------------------------------------ [...truncated 248 lines...] config.status: creating config/myconfig-sample-header.hpp config.status: creating src/Makefile config.status: creating src/tcl/Makefile config.status: creating src/python/Makefile config.status: creating src/python/espresso/Makefile config.status: creating tools/Makefile config.status: creating scripts/Makefile config.status: creating testsuite/Makefile config.status: creating doc/Makefile config.status: creating doc/logo/Makefile config.status: creating doc/ug/Makefile config.status: creating doc/dg/Makefile config.status: creating doc/doxygen/Makefile config.status: creating doc/tutorials/Makefile config.status: creating doc/tutorials/01-lennard_jones/Makefile config.status: creating doc/tutorials/02-charged_system/Makefile config.status: creating doc/tutorials/03-object_in_fluid/Makefile config.status: creating doc/latexit.sh config.status: creating testsuite/runtest.sh config.status: creating tools/es_mpiexec config.status: creating src/python/pypresso config.status: creating src/acconfig.hpp config.status: executing depfiles commands config.status: executing libtool commands config.status: executing myconfig-sample.hpp commands **************************************************************** * Configuration summary * **************************************************************** platform detected = x86_64-unknown-linux-gnu package version = 3.2.0-981-g2dafa32 development sources = yes Compiler -------- compiler = g++ linker = /usr/x86_64-suse-linux/bin/ld -m elf_x86_64 c++ compiler flags = -Wall -O5 c++ preprocessor flags = linker flags = -L/usr/local/cuda/lib64 libraries = -ltcl8.5 -lcufft -lcudart -lfftw3 -lm using debug flags = using profiling flags = Libraries --------- FFTW = yes efence = no Cuda ---- CUDA compiler = /usr/local/cuda/bin/nvcc CUDA flags = --ptxas-options=-v -gencode arch=compute_20,code=compute_20 Tcl/Tk ------ Tcl version = tcl8.5 Tk version = none Python ------ python = /usr/local/bin/python -B build python interface = no Other settings -------------- config = myconfig.hpp installation prefix = /home/jenkins/Espresso number of test tasks = 8 mympiexec = mpiexec = pdflatex = /usr/bin/pdflatex makeindex = /usr/bin/makeindex bibtex = /usr/bin/bibtex doxygen = /usr/bin/doxygen dot = /usr/bin/dot WARNING: MPI disabled or not supported! Parallelization turned off. Not building Python interface. END CONFIGURE + maintainer/jenkins/build.sh 13166 (process ID) old priority 0, new priority 5 srcdir= builddir= insource=true parallelism=nompi START BUILD myconfig=molcut build_procs=4 Copying molcut.hpp to >make -j 4 Making all in config make[1]: Entering directory ` make[1]: Nothing to be done for `all'. make[1]: Leaving directory ` Making all in src make[1]: Entering directory ` GEN myconfig-final.hpp <= ../myconfig.hpp GEN config-features.cpp GEN config-features.hpp make all-recursive make[2]: Entering directory ` Making all in . make[3]: Entering directory ` CXX cells.lo CXX config-features.lo CXX collision.lo CXX communication.lo CXX comfixed.lo CXX comforce.lo CXX constraint.lo CXX cuda_interface.lo In file included from forces.hpp:41:0, from communication.cpp:34: p3m-dipolar.hpp: In function 'double dp3m_add_pair_force(Particle*, Particle*, double*, double, double, double*)': p3m-dipolar.hpp:170:10: warning: variable 'mixmj' set but not used [-Wunused-but-set-variable] p3m-dipolar.hpp:170:20: warning: variable 'mixr' set but not used [-Wunused-but-set-variable] p3m-dipolar.hpp:170:29: warning: variable 'mjxr' set but not used [-Wunused-but-set-variable] communication.cpp: In function 'void mpi_external_potential_broadcast(int)': communication.cpp:2929:31: warning: unused variable 'e' [-Wunused-variable] In file included from energy.hpp:33:0, from constraint.cpp:27: p3m-dipolar.hpp: In function 'double dp3m_add_pair_force(Particle*, Particle*, double*, double, double, double*)': p3m-dipolar.hpp:170:10: warning: variable 'mixmj' set but not used [-Wunused-but-set-variable] p3m-dipolar.hpp:170:20: warning: variable 'mixr' set but not used [-Wunused-but-set-variable] p3m-dipolar.hpp:170:29: warning: variable 'mjxr' set but not used [-Wunused-but-set-variable] CXX debug.lo CXX domain_decomposition.lo In file included from forces.hpp:41:0, from domain_decomposition.cpp:29: p3m-dipolar.hpp: In function 'double dp3m_add_pair_force(Particle*, Particle*, double*, double, double, double*)': p3m-dipolar.hpp:170:10: warning: variable 'mixmj' set but not used [-Wunused-but-set-variable] p3m-dipolar.hpp:170:20: warning: variable 'mixr' set but not used [-Wunused-but-set-variable] p3m-dipolar.hpp:170:29: warning: variable 'mjxr' set but not used [-Wunused-but-set-variable] CXX electrokinetics_pdb_parse.lo CXX energy.lo In file included from energy.hpp:33:0, from energy.cpp:24: p3m-dipolar.hpp: In function 'double dp3m_add_pair_force(Particle*, Particle*, double*, double, double, double*)': p3m-dipolar.hpp:170:10: warning: variable 'mixmj' set but not used [-Wunused-but-set-variable] p3m-dipolar.hpp:170:20: warning: variable 'mixr' set but not used [-Wunused-but-set-variable] p3m-dipolar.hpp:170:29: warning: variable 'mjxr' set but not used [-Wunused-but-set-variable] CXX external_potential.lo CXX errorhandling.lo external_potential.cpp: In function 'int lattice_read_file(Lattice*, char*)': external_potential.cpp:176:46: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] CXX fft.lo CXX fft-common.lo CXX fft-dipolar.lo CXX forcecap.lo CXX forces.lo CXX galilei.lo In file included from forces.hpp:41:0, from pressure.hpp:32, from forces.cpp:33: p3m-dipolar.hpp: In function 'double dp3m_add_pair_force(Particle*, Particle*, double*, double, double, double*)': p3m-dipolar.hpp:170:10: warning: variable 'mixmj' set but not used [-Wunused-but-set-variable] p3m-dipolar.hpp:170:20: warning: variable 'mixr' set but not used [-Wunused-but-set-variable] p3m-dipolar.hpp:170:29: warning: variable 'mjxr' set but not used [-Wunused-but-set-variable] CXX ghosts.lo In file included from forces.hpp:41:0, from galilei.cpp:28: p3m-dipolar.hpp: In function 'double dp3m_add_pair_force(Particle*, Particle*, double*, double, double, double*)': p3m-dipolar.hpp:170:10: warning: variable 'mixmj' set but not used [-Wunused-but-set-variable] p3m-dipolar.hpp:170:20: warning: variable 'mixr' set but not used [-Wunused-but-set-variable] p3m-dipolar.hpp:170:29: warning: variable 'mjxr' set but not used [-Wunused-but-set-variable] CXX global.lo In file included from forces.hpp:41:0, from ghosts.cpp:37: p3m-dipolar.hpp: In function 'double dp3m_add_pair_force(Particle*, Particle*, double*, double, double, double*)': p3m-dipolar.hpp:170:10: warning: variable 'mixmj' set but not used [-Wunused-but-set-variable] p3m-dipolar.hpp:170:20: warning: variable 'mixr' set but not used [-Wunused-but-set-variable] p3m-dipolar.hpp:170:29: warning: variable 'mjxr' set but not used [-Wunused-but-set-variable] CXX grid.lo CXX halo.lo CXX iccp3m.lo CXX imd.lo In file included from forces.hpp:41:0, from iccp3m.hpp:97, from iccp3m.cpp:33: p3m-dipolar.hpp: In function 'double dp3m_add_pair_force(Particle*, Particle*, double*, double, double, double*)': p3m-dipolar.hpp:170:10: warning: variable 'mixmj' set but not used [-Wunused-but-set-variable] p3m-dipolar.hpp:170:20: warning: variable 'mixr' set but not used [-Wunused-but-set-variable] p3m-dipolar.hpp:170:29: warning: variable 'mjxr' set but not used [-Wunused-but-set-variable] CXX initialize.lo In file included from energy.hpp:33:0, from initialize.cpp:31: p3m-dipolar.hpp: In function 'double dp3m_add_pair_force(Particle*, Particle*, double*, double, double, double*)': p3m-dipolar.hpp:170:10: warning: variable 'mixmj' set but not used [-Wunused-but-set-variable] p3m-dipolar.hpp:170:20: warning: variable 'mixr' set but not used [-Wunused-but-set-variable] p3m-dipolar.hpp:170:29: warning: variable 'mjxr' set but not used [-Wunused-but-set-variable] CXX integrate.lo In file included from forces.hpp:41:0, from pressure.hpp:32, from integrate.cpp:45: p3m-dipolar.hpp: In function 'double dp3m_add_pair_force(Particle*, Particle*, double*, double, double, double*)': p3m-dipolar.hpp:170:10: warning: variable 'mixmj' set but not used [-Wunused-but-set-variable] p3m-dipolar.hpp:170:20: warning: variable 'mixr' set but not used [-Wunused-but-set-variable] p3m-dipolar.hpp:170:29: warning: variable 'mjxr' set but not used [-Wunused-but-set-variable] CXX interaction_data.lo In file included from forces.hpp:41:0, from pressure.hpp:32, from interaction_data.cpp:32: p3m-dipolar.hpp: In function 'double dp3m_add_pair_force(Particle*, Particle*, double*, double, double, double*)': p3m-dipolar.hpp:170:10: warning: variable 'mixmj' set but not used [-Wunused-but-set-variable] p3m-dipolar.hpp:170:20: warning: variable 'mixr' set but not used [-Wunused-but-set-variable] p3m-dipolar.hpp:170:29: warning: variable 'mjxr' set but not used [-Wunused-but-set-variable] CXX lattice.lo lattice.cpp: In function 'void lattice_interpolate_linear_gradient(Lattice*, double*, double*)': lattice.cpp:151:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:156:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:163:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:170:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:177:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:184:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:191:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:198:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:205:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:145:11: warning: unused variable 'w' [-Wunused-variable] lattice.cpp:145:17: warning: unused variable 'wd' [-Wunused-variable] lattice.cpp:146:12: warning: unused variable 'temp_index' [-Wunused-variable] lattice.cpp: In function 'void lattice_interpolate_linear(Lattice*, double*, double*)': lattice.cpp:253:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:260:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:234:12: warning: unused variable 'temp_index' [-Wunused-variable] CXX layered.lo CXX lb.lo In file included from forces.hpp:41:0, from layered.cpp:33: p3m-dipolar.hpp: In function 'double dp3m_add_pair_force(Particle*, Particle*, double*, double, double, double*)': p3m-dipolar.hpp:170:10: warning: variable 'mixmj' set but not used [-Wunused-but-set-variable] p3m-dipolar.hpp:170:20: warning: variable 'mixr' set but not used [-Wunused-but-set-variable] p3m-dipolar.hpp:170:29: warning: variable 'mjxr' set but not used [-Wunused-but-set-variable] lb.cpp: In function 'void lb_prepare_communication()': lb.cpp:1755:54: error: 'MPI_Type_get_extent' was not declared in this scope lb.cpp:1758:75: error: 'MPI_Type_create_hvector' was not declared in this scope CXX lb-boundaries.lo make[3]: *** [lb.lo] Error 1 make[3]: *** Waiting for unfinished jobs.... make[3]: Leaving directory ` make[2]: *** [all-recursive] Error 1 make[2]: Leaving directory ` make[1]: *** [all] Error 2 make[1]: Leaving directory ` make: *** [all-recursive] Error 1 + exit 1 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE From MAILER-DAEMON Mon May 19 09:00:40 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WmNBI-0006Ur-SS for mharc-espressomd-maintainer@gnu.org; Mon, 19 May 2014 09:00:40 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:32924) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WmNBA-0006Ub-HS for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 09:00:39 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WmNB3-0006Ke-FT for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 09:00:32 -0400 Received: from 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+0200 (CEST) Date: Mon, 19 May 2014 14:58:55 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <773202263.27.1400504335893.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: maxset,3core X-Jenkins-Result: UNSTABLE X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.4 Subject: [Espressomd-maintainer] =?utf-8?q?Jenkins_build_is_unstable=3A_ma?= =?utf-8?q?ster-nightly-multiconfig_=C2=BB_maxset=2C3core_=2387?= X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Mon, 19 May 2014 13:00:39 -0000 See From MAILER-DAEMON Mon May 19 09:42:50 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WmNq6-000613-I5 for mharc-espressomd-maintainer@gnu.org; Mon, 19 May 2014 09:42:50 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:42939) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WmNpz-0005uS-0e for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 09:42:48 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WmNps-0004rr-Ql for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 09:42:42 -0400 Received: from medousa.rus.uni-stuttgart.de ([129.69.192.4]:45194) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WmNpr-0004rP-U7 for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 09:42:36 -0400 Received: from localhost (localhost [127.0.0.1]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP id 94BE237EF8 for ; Mon, 19 May 2014 15:42:34 +0200 (CEST) X-Virus-Scanned: by amavisd-new at medousa.rus.uni-stuttgart.de Received: from medousa.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (medousa.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id efY1kSYKhkAf for ; Mon, 19 May 2014 15:42:29 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (anoa.icp.uni-stuttgart.de [129.69.120.76]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Mon, 19 May 2014 15:42:29 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 17960A40EE for ; Mon, 19 May 2014 15:42:29 +0200 (CEST) Date: Mon, 19 May 2014 15:42:28 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1627926151.0.1400506949047.JavaMail.jenkins@elk> In-Reply-To: <1371320249.15.1400504028284.JavaMail.jenkins@elk> References: <1371320249.15.1400504028284.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: quoted-printable X-Jenkins-Job: master-nightly-distcheck X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.4 Subject: [Espressomd-maintainer] Build failed in Jenkins: master-nightly-distcheck #78 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Mon, 19 May 2014 13:42:49 -0000 See Changes: [Olaf Lenz] Some more fixes to Stefan's megamerge. ------------------------------------------ [...truncated 1314 lines...] make[3]: Leaving directory ` Making dvi in tutorials make[3]: Entering directory ` Making dvi in 01-lennard_jones make[4]: Entering directory ` make[4]: Nothing to be done for `dvi'. make[4]: Leaving directory ` Making dvi in 02-charged_system make[4]: Entering directory ` make[4]: Nothing to be done for `dvi'. make[4]: Leaving directory ` Making dvi in 03-object_in_fluid make[4]: Entering directory ` make[4]: Nothing to be done for `dvi'. make[4]: Leaving directory ` make[4]: Entering directory ` make[4]: Nothing to be done for `dvi-am'. make[4]: Leaving directory ` make[3]: Leaving directory ` make[3]: Entering directory ` make[3]: Nothing to be done for `dvi-am'. make[3]: Leaving directory ` make[2]: Leaving directory ` make[1]: Leaving directory ` make[1]: Entering directory ` Making check in config make[2]: Entering directory ` make[2]: Nothing to be done for `check'. make[2]: Leaving directory ` Making check in src make[2]: Entering directory ` GEN myconfig-final.hpp <=3D ../../src/myconfig-default.hpp make check-recursive make[3]: Entering directory ` Making check in . make[4]: Entering directory ` GEN myconfig-final.hpp <=3D ../../src/myconfig-default.hpp GEN config-version.cpp make[4]: Leaving directory ` Making check in tcl make[4]: Entering directory ` make[4]: Nothing to be done for `check'. make[4]: Leaving directory ` make[3]: Leaving directory ` make[2]: Leaving directory ` Making check in . make[2]: Entering directory ` test -L Espresso || ln -s src/tcl/Espresso . make[2]: Leaving directory ` Making check in scripts make[2]: Entering directory ` for file in init.tcl ABHmath.tcl auxiliary.tcl blockfile_support.tcl bundle= .tcl countBonds.tcl dielectrics.tcl gibbs_ghmc.tcl object_in_fluid.tcl para= llel_tempering.tcl pdb.tcl polymer.tcl statistics.tcl vtf.tcl vtk.tcl; do \ if test ! -e $file || test ! $file -ef then \ /usr/bin/install -c -m 644 \ fi; \ done make check-local make[3]: Entering directory ` for file in init.tcl ABHmath.tcl auxiliary.tcl blockfile_support.tcl bundle= .tcl countBonds.tcl dielectrics.tcl gibbs_ghmc.tcl object_in_fluid.tcl para= llel_tempering.tcl pdb.tcl polymer.tcl statistics.tcl vtf.tcl vtk.tcl; do \ if test ! -e $file || test ! $file -ef then \ /usr/bin/install -c -m 644 \ fi; \ done make[3]: Leaving directory ` make[2]: Leaving directory ` Making check in tools make[2]: Entering directory ` make[2]: Nothing to be done for `check'. make[2]: Leaving directory ` Making check in testsuite make[2]: Entering directory ` make check-local make[3]: Entering directory ` if test -n ""; then \ ./runtest.sh -p "" analysis.tcl angle.tcl collision-detection-centers.tcl= collision-detection-poc.tcl comforce.tcl comfixed.tcl command_syntax.tcl c= onstraints.tcl constraints_reflecting.tcl correlation.tcl constraints_rhomb= oid.tcl dh.tcl dielectric.tcl ek_eof_one_species_x.tcl ek_eof_one_species_y= .tcl ek_eof_one_species_z.tcl ek_reaction.tcl el2d.tcl el2d_die.tcl el2d_no= nneutral.tcl exclusions.tcl external_potential.tcl fene.tcl gb.tcl ghmc.tcl= harm.tcl iccp3m.tcl intpbc.tcl intppbc.tcl kinetic.tcl langevin.tcl layere= d.tcl lb.tcl lb_fluid_coupling.tcl lb_fluid_coupling_gpu.tcl lb_gpu.tcl lb_= planar.tcl lb_planar_gpu.tcl lb_planar_embedded_particles.tcl lb_planar_emb= edded_particles_gpu.tcl lb_stokes_sphere.tcl lb_stokes_sphere_gpu.tcl lj.tc= l lj-cos.tcl lj-generic.tcl madelung.tcl maggs.tcl magnetic-field.tcl mass.= tcl mass-and-rinertia.tcl mdlc.tcl mmm1d.tcl npt.tcl nsquare.tcl nve_pe.tcl= object_in_fluid.tcl object_in_fluid_gpu.tcl observable.tcl p3m.tcl p3m_gpu= .tcl p3m_magnetostatics.tcl p3m_magnetostatics2.tcl p3m_simple_noncubic.tcl= p3m_wall.tcl p3m_wall_gpu.tcl rotation.tcl rotation_per_particle.tcl sc_fl= uid_gpu.tcl tabulated.tcl tunable_slip.tcl uwerr.tcl virtual-sites.tcl; \ else \ ./runtest.sh analysis.tcl angle.tcl collision-detection-centers.tcl colli= sion-detection-poc.tcl comforce.tcl comfixed.tcl command_syntax.tcl constra= ints.tcl constraints_reflecting.tcl correlation.tcl constraints_rhomboid.tc= l dh.tcl dielectric.tcl ek_eof_one_species_x.tcl ek_eof_one_species_y.tcl e= k_eof_one_species_z.tcl ek_reaction.tcl el2d.tcl el2d_die.tcl el2d_nonneutr= al.tcl exclusions.tcl external_potential.tcl fene.tcl gb.tcl ghmc.tcl harm.= tcl iccp3m.tcl intpbc.tcl intppbc.tcl kinetic.tcl langevin.tcl layered.tcl = lb.tcl lb_fluid_coupling.tcl lb_fluid_coupling_gpu.tcl lb_gpu.tcl lb_planar= .tcl lb_planar_gpu.tcl lb_planar_embedded_particles.tcl lb_planar_embedded_= particles_gpu.tcl lb_stokes_sphere.tcl lb_stokes_sphere_gpu.tcl lj.tcl lj-c= os.tcl lj-generic.tcl madelung.tcl maggs.tcl magnetic-field.tcl mass.tcl ma= ss-and-rinertia.tcl mdlc.tcl mmm1d.tcl npt.tcl nsquare.tcl nve_pe.tcl objec= t_in_fluid.tcl object_in_fluid_gpu.tcl observable.tcl p3m.tcl p3m_gpu.tcl p= 3m_magnetostatics.tcl p3m_magnetostatics2.tcl p3m_simple_noncubic.tcl p3m_w= all.tcl p3m_wall_gpu.tcl rotation.tcl rotation_per_particle.tcl sc_fluid_gp= u.tcl tabulated.tcl tunable_slip.tcl uwerr.tcl virtual-sites.tcl; \ fi ln -s ../../testsuite/analysis_system.data.00.gz . ln -s ../../testsuite/analysis_system.data.01.gz . ln -s ../../testsuite/analysis_system.data.02.gz . ln -s ../../testsuite/analysis_system.data.03.gz . ln -s ../../testsuite/analysis_system.data.04.gz . ln -s ../../testsuite/analysis_system.data.05.gz . ln -s ../../testsuite/analysis_system.data.06.gz . ln -s ../../testsuite/analysis_system.data.07.gz . ln -s ../../testsuite/analysis_system.data.08.gz . ln -s ../../testsuite/analysis_system.data.09.gz . ln -s ../../testsuite/analysis_system.data.10.gz . ln -s ../../testsuite/analysis.tcl . ln -s ../../testsuite/angle.tcl . ln -s ../../testsuite/collision-detection-centers.tcl . ln -s ../../testsuite/collision-detection-poc.tcl . ln -s ../../testsuite/comfixed_system.data . ln -s ../../testsuite/comfixed.tcl . ln -s ../../testsuite/comforce_system.data . ln -s ../../testsuite/comforce.tcl . ln -s ../../testsuite/command_syntax.tcl . ln -s ../../testsuite/constraints_reflecting.tcl . ln -s ../../testsuite/constraints_rhomboid.tcl . ln -s ../../testsuite/constraints_system.data . ln -s ../../testsuite/constraints.tcl . ln -s ../../testsuite/correlation.tcl . ln -s ../../testsuite/dh_system.data . ln -s ../../testsuite/dh.tcl . ln -s ../../testsuite/dielectric.tcl . ln -s ../../testsuite/ek_eof_one_species_x.tcl . ln -s ../../testsuite/ek_eof_one_species_y.tcl . ln -s ../../testsuite/ek_eof_one_species_z.tcl . ln -s ../../testsuite/ek_reaction.tcl . ln -s ../../testsuite/el2d_die.tcl . ln -s ../../testsuite/el2d_nonneutral.tcl . ln -s ../../testsuite/el2d_system.data . ln -s ../../testsuite/el2d_system_die.data . ln -s ../../testsuite/el2d.tcl . ln -s ../../testsuite/exclusions.tcl . ln -s ../../testsuite/external_potential.tcl . ln -s ../../testsuite/fene_system.data.gz . ln -s ../../testsuite/fene.tcl . ln -s ../../testsuite/gb_system.data . ln -s ../../testsuite/gb.tcl . ln -s ../../testsuite/ghmc.tcl . ln -s ../../testsuite/harm_system.data.gz . ln -s ../../testsuite/harm.tcl . ln -s ../../testsuite/iccp3m.tcl . ln -s ../../testsuite/intpbc_system.data.gz . ln -s ../../testsuite/intpbc.tcl . ln -s ../../testsuite/intppbc_system.data.gz . ln -s ../../testsuite/intppbc.tcl . ln -s ../../testsuite/kinetic.tcl . ln -s ../../testsuite/langevin.tcl . ln -s ../../testsuite/layered.tcl . ln -s ../../testsuite/lb_fluid_coupling_gpu.tcl . ln -s ../../testsuite/lb_fluid_coupling.tcl . ln -s ../../testsuite/lb_gpu.tcl . ln -s ../../testsuite/lb_planar_embedded_particles_gpu.tcl . ln -s ../../testsuite/lb_planar_embedded_particles.tcl . ln -s ../../testsuite/lb_planar_gpu.tcl . ln -s ../../testsuite/lb_planar.tcl . ln -s ../../testsuite/lb_stokes_sphere_gpu.tcl . ln -s ../../testsuite/lb_stokes_sphere.tcl . ln -s ../../testsuite/lb_system.data . ln -s ../../testsuite/lb.tcl . ln -s ../../testsuite/lj1.tab . ln -s ../../testsuite/lj2.tab . ln -s ../../testsuite/lj3.tab . ln -s ../../testsuite/lj-cos_system.data . ln -s ../../testsuite/lj-cos.tcl . ln -s ../../testsuite/lj-generic.tcl . ln -s ../../testsuite/lj_system.data . ln -s ../../testsuite/lj.tcl . ln -s ../../testsuite/madelung.tcl . ln -s ../../testsuite/maggs_correct_rdf.data . ln -s ../../testsuite/maggs.tcl . ln -s ../../testsuite/magnetic-field.tcl . ln -s ../../testsuite/Makefile.am . ln -s ../../testsuite/Makefile.in . ln -s ../../testsuite/mass-and-rinertia.tcl . ln -s ../../testsuite/mass_system.data . ln -s ../../testsuite/mass.tcl . ln -s ../../testsuite/mdlc_expected_energy.data . ln -s ../../testsuite/mdlc_expected_force_torque.data . ln -s ../../testsuite/mdlc_system.data . ln -s ../../testsuite/mdlc.tcl . ln -s ../../testsuite/mmm1d_system.data . ln -s ../../testsuite/mmm1d.tcl . ln -s ../../testsuite/npt_lj_system.data . ln -s ../../testsuite/npt.tcl . ln -s ../../testsuite/nsquare.tcl . ln -s ../../testsuite/nve_pe.tcl . ln -s ../../testsuite/object_in_fluid_gpu.tcl . ln -s ../../testsuite/object_in_fluid_system-final.data . ln -s ../../testsuite/object_in_fluid_system-init.data . ln -s ../../testsuite/object_in_fluid_system-nodes.data . ln -s ../../testsuite/object_in_fluid_system-triangles.data . ln -s ../../testsuite/object_in_fluid.tcl . ln -s ../../testsuite/observable.tcl . ln -s ../../testsuite/p3m_gpu.tcl . ln -s ../../testsuite/p3m_magnetostatics2_expected.data . ln -s ../../testsuite/p3m_magnetostatics2_system.data . ln -s ../../testsuite/p3m_magnetostatics2.tcl . ln -s ../../testsuite/p3m_magnetostatics.data . ln -s ../../testsuite/p3m_magnetostatics.tcl . ln -s ../../testsuite/p3m_simple_noncubic.tcl . ln -s ../../testsuite/p3m_system.data . ln -s ../../testsuite/p3m.tcl . ln -s ../../testsuite/p3m_wall_gpu.tcl . ln -s ../../testsuite/p3m_wall_system.data . ln -s ../../testsuite/p3m_wall.tcl . ln -s ../../testsuite/pe_micelle.data . ln -s ../../testsuite/pe_micelle.tcl . ln -s ../../testsuite/rotation_per_particle.tcl . ln -s ../../testsuite/rotation.tcl . ln -s ../../testsuite/runtest.sh.in . ln -s ../../testsuite/sc_fluid_gpu.tcl . ln -s ../../testsuite/tabulated_system.data . ln -s ../../testsuite/tabulated.tcl . ln -s ../../testsuite/tests_common.tcl . ln -s ../../testsuite/thermostat.data . ln -s ../../testsuite/thermostat_rot.data . ln -s ../../testsuite/tunable_slip.tcl . ln -s ../../testsuite/uwerr.data . ln -s ../../testsuite/uwerr.tcl . ln -s ../../testsuite/virtual-sites.tcl . ** RUNNING TESTSUITE FOR 8 tasks analysis.tcl - ok angle.tcl - ok collision-detection-centers.tcl - ignored collision-detection-poc.tcl - ignored comforce.tcl - ignored comfixed.tcl - ignored command_syntax.tcl - ok constraints.tcl - ok constraints_reflecting.tcl - ok correlation.tcl - ok constraints_rhomboid.tcl - ok dh.tcl - ok dielectric.tcl - ok ek_eof_one_species_x.tcl - ignored ek_eof_one_species_y.tcl - ignored ek_eof_one_species_z.tcl - ignored ek_reaction.tcl - ignored el2d.tcl - ok el2d_die.tcl - ok el2d_nonneutral.tcl - ok exclusions.tcl - ok external_potential.tcl - ERROR (code=3D1) Some test cases failed with 8 tasks, interrupting test suite. ************************************************** ** Not all test cases were successful! ** Have a look at the file testsuite/runtest.log ** for the output of the testcases. ************************************************** ** The testsuite was interrupted! ************************************************** make[3]: *** [check-local] Error 1 make[3]: Leaving directory ` make[2]: *** [check-am] Error 2 make[2]: Leaving directory ` make[1]: *** [check-recursive] Error 1 make[1]: Leaving directory ` make: *** [distcheck] Error 1 + exit 1 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE Archiving artifacts From MAILER-DAEMON Mon May 19 09:43:14 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WmNqU-0006PG-NF for mharc-espressomd-maintainer@gnu.org; Mon, 19 May 2014 09:43:14 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:43125) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WmNqM-0006Gw-Go for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 09:43:13 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WmNqF-0004x7-Fh for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 09:43:06 -0400 Received: from hydra-out.rus.uni-stuttgart.de ([2001:7c0:2041:25::1:3]:47210 helo=hydra.rus.uni-stuttgart.de) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WmNqF-0004wq-7W for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 09:42:59 -0400 Received: from localhost (localhost [127.0.0.1]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP id 3819312BCFB for ; Mon, 19 May 2014 15:42:58 +0200 (CEST) X-Virus-Scanned: by amavisd-new at hydra.rus.uni-stuttgart.de Received: from hydra.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (hydra.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id arT0gOfUMNY9 for ; Mon, 19 May 2014 15:42:53 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (ica1.uni-stuttgart.de [129.69.120.76]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Mon, 19 May 2014 15:42:53 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id BE3B7A40EE for ; Mon, 19 May 2014 15:42:53 +0200 (CEST) Date: Mon, 19 May 2014 15:42:53 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1489424606.1.1400506973775.JavaMail.jenkins@elk> In-Reply-To: <1644651019.20.1400504232852.JavaMail.jenkins@elk> References: <1644651019.20.1400504232852.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: molcut,nompi X-Jenkins-Result: SUCCESS X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2001:7c0:2041:25::1:3 Subject: [Espressomd-maintainer] =?utf-8?q?Jenkins_build_is_back_to_normal?= =?utf-8?q?_=3A_master-nightly-multiconfig_=C2=BB_molcut=2Cnompi_=2388?= X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Mon, 19 May 2014 13:43:13 -0000 See From MAILER-DAEMON Mon May 19 09:44:25 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WmNrc-0006j1-VD for mharc-espressomd-maintainer@gnu.org; Mon, 19 May 2014 09:44:24 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:43627) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WmNrU-0006iF-D3 for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 09:44:23 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WmNrM-0005D9-V8 for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 09:44:16 -0400 Received: from hydra.rus.uni-stuttgart.de ([129.69.192.3]:49367) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WmNrM-0005Cx-Pp for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 09:44:08 -0400 Received: from localhost (localhost [127.0.0.1]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP id F3A2E12BA51 for ; Mon, 19 May 2014 15:44:07 +0200 (CEST) X-Virus-Scanned: by amavisd-new at hydra.rus.uni-stuttgart.de Received: from hydra.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (hydra.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id 0T3CFltt-0wD for ; Mon, 19 May 2014 15:44:03 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (icp.uni-stuttgart.de [129.69.120.76]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Mon, 19 May 2014 15:44:03 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 7E8C6A40EE for ; Mon, 19 May 2014 15:44:03 +0200 (CEST) Date: Mon, 19 May 2014 15:44:03 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1134458789.2.1400507043510.JavaMail.jenkins@elk> In-Reply-To: <1668695914.17.1400504188688.JavaMail.jenkins@elk> References: <1668695914.17.1400504188688.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: maxset,nompi X-Jenkins-Result: SUCCESS X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.3 Subject: [Espressomd-maintainer] =?utf-8?q?Jenkins_build_is_back_to_normal?= =?utf-8?q?_=3A_master-nightly-multiconfig_=C2=BB_maxset=2Cnompi_=2388?= X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Mon, 19 May 2014 13:44:23 -0000 See From MAILER-DAEMON Mon May 19 18:58:09 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WmWVV-0004wJ-R5 for mharc-espressomd-maintainer@gnu.org; Mon, 19 May 2014 18:58:09 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:53677) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WmWVP-0004vI-0T for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 18:58:08 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WmWVJ-0004As-To for espressomd-maintainer@nongnu.org; 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Tue, 20 May 2014 00:57:50 +0200 (CEST) Date: Tue, 20 May 2014 00:57:50 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1590606171.3.1400540270163.JavaMail.jenkins@elk> In-Reply-To: <1627926151.0.1400506949047.JavaMail.jenkins@elk> References: <1627926151.0.1400506949047.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: quoted-printable X-Jenkins-Job: master-nightly-distcheck X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2001:7c0:2041:25::1:4 Subject: [Espressomd-maintainer] Build failed in Jenkins: master-nightly-distcheck #79 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Mon, 19 May 2014 22:58:08 -0000 See Changes: [Olaf Lenz] Some fiex to electrokinetics docs. ------------------------------------------ [...truncated 1314 lines...] make[3]: Leaving directory ` Making dvi in tutorials make[3]: Entering directory ` Making dvi in 01-lennard_jones make[4]: Entering directory ` make[4]: Nothing to be done for `dvi'. make[4]: Leaving directory ` Making dvi in 02-charged_system make[4]: Entering directory ` make[4]: Nothing to be done for `dvi'. make[4]: Leaving directory ` Making dvi in 03-object_in_fluid make[4]: Entering directory ` make[4]: Nothing to be done for `dvi'. make[4]: Leaving directory ` make[4]: Entering directory ` make[4]: Nothing to be done for `dvi-am'. make[4]: Leaving directory ` make[3]: Leaving directory ` make[3]: Entering directory ` make[3]: Nothing to be done for `dvi-am'. make[3]: Leaving directory ` make[2]: Leaving directory ` make[1]: Leaving directory ` make[1]: Entering directory ` Making check in config make[2]: Entering directory ` make[2]: Nothing to be done for `check'. make[2]: Leaving directory ` Making check in src make[2]: Entering directory ` GEN myconfig-final.hpp <=3D ../../src/myconfig-default.hpp make check-recursive make[3]: Entering directory ` Making check in . make[4]: Entering directory ` GEN myconfig-final.hpp <=3D ../../src/myconfig-default.hpp GEN config-version.cpp make[4]: Leaving directory ` Making check in tcl make[4]: Entering directory ` make[4]: Nothing to be done for `check'. make[4]: Leaving directory ` make[3]: Leaving directory ` make[2]: Leaving directory ` Making check in . make[2]: Entering directory ` test -L Espresso || ln -s src/tcl/Espresso . make[2]: Leaving directory ` Making check in scripts make[2]: Entering directory ` for file in init.tcl ABHmath.tcl auxiliary.tcl blockfile_support.tcl bundle= .tcl countBonds.tcl dielectrics.tcl gibbs_ghmc.tcl object_in_fluid.tcl para= llel_tempering.tcl pdb.tcl polymer.tcl statistics.tcl vtf.tcl vtk.tcl; do \ if test ! -e $file || test ! $file -ef then \ /usr/bin/install -c -m 644 \ fi; \ done make check-local make[3]: Entering directory ` for file in init.tcl ABHmath.tcl auxiliary.tcl blockfile_support.tcl bundle= .tcl countBonds.tcl dielectrics.tcl gibbs_ghmc.tcl object_in_fluid.tcl para= llel_tempering.tcl pdb.tcl polymer.tcl statistics.tcl vtf.tcl vtk.tcl; do \ if test ! -e $file || test ! $file -ef then \ /usr/bin/install -c -m 644 \ fi; \ done make[3]: Leaving directory ` make[2]: Leaving directory ` Making check in tools make[2]: Entering directory ` make[2]: Nothing to be done for `check'. make[2]: Leaving directory ` Making check in testsuite make[2]: Entering directory ` make check-local make[3]: Entering directory ` if test -n ""; then \ ./runtest.sh -p "" analysis.tcl angle.tcl collision-detection-centers.tcl= collision-detection-poc.tcl comforce.tcl comfixed.tcl command_syntax.tcl c= onstraints.tcl constraints_reflecting.tcl correlation.tcl constraints_rhomb= oid.tcl dh.tcl dielectric.tcl ek_eof_one_species_x.tcl ek_eof_one_species_y= .tcl ek_eof_one_species_z.tcl ek_reaction.tcl el2d.tcl el2d_die.tcl el2d_no= nneutral.tcl exclusions.tcl external_potential.tcl fene.tcl gb.tcl ghmc.tcl= harm.tcl iccp3m.tcl intpbc.tcl intppbc.tcl kinetic.tcl langevin.tcl layere= d.tcl lb.tcl lb_fluid_coupling.tcl lb_fluid_coupling_gpu.tcl lb_gpu.tcl lb_= planar.tcl lb_planar_gpu.tcl lb_planar_embedded_particles.tcl lb_planar_emb= edded_particles_gpu.tcl lb_stokes_sphere.tcl lb_stokes_sphere_gpu.tcl lj.tc= l lj-cos.tcl lj-generic.tcl madelung.tcl maggs.tcl magnetic-field.tcl mass.= tcl mass-and-rinertia.tcl mdlc.tcl mmm1d.tcl npt.tcl nsquare.tcl nve_pe.tcl= object_in_fluid.tcl object_in_fluid_gpu.tcl observable.tcl p3m.tcl p3m_gpu= .tcl p3m_magnetostatics.tcl p3m_magnetostatics2.tcl p3m_simple_noncubic.tcl= p3m_wall.tcl p3m_wall_gpu.tcl rotation.tcl rotation_per_particle.tcl sc_fl= uid_gpu.tcl tabulated.tcl tunable_slip.tcl uwerr.tcl virtual-sites.tcl; \ else \ ./runtest.sh analysis.tcl angle.tcl collision-detection-centers.tcl colli= sion-detection-poc.tcl comforce.tcl comfixed.tcl command_syntax.tcl constra= ints.tcl constraints_reflecting.tcl correlation.tcl constraints_rhomboid.tc= l dh.tcl dielectric.tcl ek_eof_one_species_x.tcl ek_eof_one_species_y.tcl e= k_eof_one_species_z.tcl ek_reaction.tcl el2d.tcl el2d_die.tcl el2d_nonneutr= al.tcl exclusions.tcl external_potential.tcl fene.tcl gb.tcl ghmc.tcl harm.= tcl iccp3m.tcl intpbc.tcl intppbc.tcl kinetic.tcl langevin.tcl layered.tcl = lb.tcl lb_fluid_coupling.tcl lb_fluid_coupling_gpu.tcl lb_gpu.tcl lb_planar= .tcl lb_planar_gpu.tcl lb_planar_embedded_particles.tcl lb_planar_embedded_= particles_gpu.tcl lb_stokes_sphere.tcl lb_stokes_sphere_gpu.tcl lj.tcl lj-c= os.tcl lj-generic.tcl madelung.tcl maggs.tcl magnetic-field.tcl mass.tcl ma= ss-and-rinertia.tcl mdlc.tcl mmm1d.tcl npt.tcl nsquare.tcl nve_pe.tcl objec= t_in_fluid.tcl object_in_fluid_gpu.tcl observable.tcl p3m.tcl p3m_gpu.tcl p= 3m_magnetostatics.tcl p3m_magnetostatics2.tcl p3m_simple_noncubic.tcl p3m_w= all.tcl p3m_wall_gpu.tcl rotation.tcl rotation_per_particle.tcl sc_fluid_gp= u.tcl tabulated.tcl tunable_slip.tcl uwerr.tcl virtual-sites.tcl; \ fi ln -s ../../testsuite/analysis_system.data.00.gz . ln -s ../../testsuite/analysis_system.data.01.gz . ln -s ../../testsuite/analysis_system.data.02.gz . ln -s ../../testsuite/analysis_system.data.03.gz . ln -s ../../testsuite/analysis_system.data.04.gz . ln -s ../../testsuite/analysis_system.data.05.gz . ln -s ../../testsuite/analysis_system.data.06.gz . ln -s ../../testsuite/analysis_system.data.07.gz . ln -s ../../testsuite/analysis_system.data.08.gz . ln -s ../../testsuite/analysis_system.data.09.gz . ln -s ../../testsuite/analysis_system.data.10.gz . ln -s ../../testsuite/analysis.tcl . ln -s ../../testsuite/angle.tcl . ln -s ../../testsuite/collision-detection-centers.tcl . ln -s ../../testsuite/collision-detection-poc.tcl . ln -s ../../testsuite/comfixed_system.data . ln -s ../../testsuite/comfixed.tcl . ln -s ../../testsuite/comforce_system.data . ln -s ../../testsuite/comforce.tcl . ln -s ../../testsuite/command_syntax.tcl . ln -s ../../testsuite/constraints_reflecting.tcl . ln -s ../../testsuite/constraints_rhomboid.tcl . ln -s ../../testsuite/constraints_system.data . ln -s ../../testsuite/constraints.tcl . ln -s ../../testsuite/correlation.tcl . ln -s ../../testsuite/dh_system.data . ln -s ../../testsuite/dh.tcl . ln -s ../../testsuite/dielectric.tcl . ln -s ../../testsuite/ek_eof_one_species_x.tcl . ln -s ../../testsuite/ek_eof_one_species_y.tcl . ln -s ../../testsuite/ek_eof_one_species_z.tcl . ln -s ../../testsuite/ek_reaction.tcl . ln -s ../../testsuite/el2d_die.tcl . ln -s ../../testsuite/el2d_nonneutral.tcl . ln -s ../../testsuite/el2d_system.data . ln -s ../../testsuite/el2d_system_die.data . ln -s ../../testsuite/el2d.tcl . ln -s ../../testsuite/exclusions.tcl . ln -s ../../testsuite/external_potential.tcl . ln -s ../../testsuite/fene_system.data.gz . ln -s ../../testsuite/fene.tcl . ln -s ../../testsuite/gb_system.data . ln -s ../../testsuite/gb.tcl . ln -s ../../testsuite/ghmc.tcl . ln -s ../../testsuite/harm_system.data.gz . ln -s ../../testsuite/harm.tcl . ln -s ../../testsuite/iccp3m.tcl . ln -s ../../testsuite/intpbc_system.data.gz . ln -s ../../testsuite/intpbc.tcl . ln -s ../../testsuite/intppbc_system.data.gz . ln -s ../../testsuite/intppbc.tcl . ln -s ../../testsuite/kinetic.tcl . ln -s ../../testsuite/langevin.tcl . ln -s ../../testsuite/layered.tcl . ln -s ../../testsuite/lb_fluid_coupling_gpu.tcl . ln -s ../../testsuite/lb_fluid_coupling.tcl . ln -s ../../testsuite/lb_gpu.tcl . ln -s ../../testsuite/lb_planar_embedded_particles_gpu.tcl . ln -s ../../testsuite/lb_planar_embedded_particles.tcl . ln -s ../../testsuite/lb_planar_gpu.tcl . ln -s ../../testsuite/lb_planar.tcl . ln -s ../../testsuite/lb_stokes_sphere_gpu.tcl . ln -s ../../testsuite/lb_stokes_sphere.tcl . ln -s ../../testsuite/lb_system.data . ln -s ../../testsuite/lb.tcl . ln -s ../../testsuite/lj1.tab . ln -s ../../testsuite/lj2.tab . ln -s ../../testsuite/lj3.tab . ln -s ../../testsuite/lj-cos_system.data . ln -s ../../testsuite/lj-cos.tcl . ln -s ../../testsuite/lj-generic.tcl . ln -s ../../testsuite/lj_system.data . ln -s ../../testsuite/lj.tcl . ln -s ../../testsuite/madelung.tcl . ln -s ../../testsuite/maggs_correct_rdf.data . ln -s ../../testsuite/maggs.tcl . ln -s ../../testsuite/magnetic-field.tcl . ln -s ../../testsuite/Makefile.am . ln -s ../../testsuite/Makefile.in . ln -s ../../testsuite/mass-and-rinertia.tcl . ln -s ../../testsuite/mass_system.data . ln -s ../../testsuite/mass.tcl . ln -s ../../testsuite/mdlc_expected_energy.data . ln -s ../../testsuite/mdlc_expected_force_torque.data . ln -s ../../testsuite/mdlc_system.data . ln -s ../../testsuite/mdlc.tcl . ln -s ../../testsuite/mmm1d_system.data . ln -s ../../testsuite/mmm1d.tcl . ln -s ../../testsuite/npt_lj_system.data . ln -s ../../testsuite/npt.tcl . ln -s ../../testsuite/nsquare.tcl . ln -s ../../testsuite/nve_pe.tcl . ln -s ../../testsuite/object_in_fluid_gpu.tcl . ln -s ../../testsuite/object_in_fluid_system-final.data . ln -s ../../testsuite/object_in_fluid_system-init.data . ln -s ../../testsuite/object_in_fluid_system-nodes.data . ln -s ../../testsuite/object_in_fluid_system-triangles.data . ln -s ../../testsuite/object_in_fluid.tcl . ln -s ../../testsuite/observable.tcl . ln -s ../../testsuite/p3m_gpu.tcl . ln -s ../../testsuite/p3m_magnetostatics2_expected.data . ln -s ../../testsuite/p3m_magnetostatics2_system.data . ln -s ../../testsuite/p3m_magnetostatics2.tcl . ln -s ../../testsuite/p3m_magnetostatics.data . ln -s ../../testsuite/p3m_magnetostatics.tcl . ln -s ../../testsuite/p3m_simple_noncubic.tcl . ln -s ../../testsuite/p3m_system.data . ln -s ../../testsuite/p3m.tcl . ln -s ../../testsuite/p3m_wall_gpu.tcl . ln -s ../../testsuite/p3m_wall_system.data . ln -s ../../testsuite/p3m_wall.tcl . ln -s ../../testsuite/pe_micelle.data . ln -s ../../testsuite/pe_micelle.tcl . ln -s ../../testsuite/rotation_per_particle.tcl . ln -s ../../testsuite/rotation.tcl . ln -s ../../testsuite/runtest.sh.in . ln -s ../../testsuite/sc_fluid_gpu.tcl . ln -s ../../testsuite/tabulated_system.data . ln -s ../../testsuite/tabulated.tcl . ln -s ../../testsuite/tests_common.tcl . ln -s ../../testsuite/thermostat.data . ln -s ../../testsuite/thermostat_rot.data . ln -s ../../testsuite/tunable_slip.tcl . ln -s ../../testsuite/uwerr.data . ln -s ../../testsuite/uwerr.tcl . ln -s ../../testsuite/virtual-sites.tcl . ** RUNNING TESTSUITE FOR 8 tasks analysis.tcl - ok angle.tcl - ok collision-detection-centers.tcl - ignored collision-detection-poc.tcl - ignored comforce.tcl - ignored comfixed.tcl - ignored command_syntax.tcl - ok constraints.tcl - ok constraints_reflecting.tcl - ok correlation.tcl - ok constraints_rhomboid.tcl - ok dh.tcl - ok dielectric.tcl - ok ek_eof_one_species_x.tcl - ignored ek_eof_one_species_y.tcl - ignored ek_eof_one_species_z.tcl - ignored ek_reaction.tcl - ignored el2d.tcl - ok el2d_die.tcl - ok el2d_nonneutral.tcl - ok exclusions.tcl - ok external_potential.tcl - ERROR (code=3D1) Some test cases failed with 8 tasks, interrupting test suite. ************************************************** ** Not all test cases were successful! ** Have a look at the file testsuite/runtest.log ** for the output of the testcases. ************************************************** ** The testsuite was interrupted! ************************************************** make[3]: *** [check-local] Error 1 make[3]: Leaving directory ` make[2]: *** [check-am] Error 2 make[2]: Leaving directory ` make[1]: *** [check-recursive] Error 1 make[1]: Leaving directory ` make: *** [distcheck] Error 1 + exit 1 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE Archiving artifacts From MAILER-DAEMON Mon May 19 22:15:39 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WmZad-0000ya-04 for mharc-espressomd-maintainer@gnu.org; Mon, 19 May 2014 22:15:39 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:58233) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WmZaV-0000yI-HK for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 22:15:37 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WmZaP-00060k-8n for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 22:15:31 -0400 Received: from medousa.rus.uni-stuttgart.de ([129.69.192.4]:50194) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WmZaO-00060Q-W4 for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 22:15:25 -0400 Received: from localhost (localhost [127.0.0.1]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP id 9945A37EF5 for ; Tue, 20 May 2014 04:15:23 +0200 (CEST) X-Virus-Scanned: by amavisd-new at medousa.rus.uni-stuttgart.de Received: from medousa.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (medousa.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id PEnTrltLk45r for ; Tue, 20 May 2014 04:15:19 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (anoa.ica1.uni-stuttgart.de [129.69.120.76]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Tue, 20 May 2014 04:15:19 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id D0FD1A40FB for ; Tue, 20 May 2014 04:15:18 +0200 (CEST) Date: Tue, 20 May 2014 04:15:18 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <577579005.4.1400552118718.JavaMail.jenkins@elk> In-Reply-To: <1761253450.22.1400504237769.JavaMail.jenkins@elk> References: <1761253450.22.1400504237769.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: shanchen,nompi X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.4 Subject: [Espressomd-maintainer] =?utf-8?q?Build_failed_in_Jenkins=3A_mast?= =?utf-8?q?er-nightly-multiconfig_=C2=BB_shanchen=2Cnompi_=2389?= X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Tue, 20 May 2014 02:15:37 -0000 See Changes: [Olaf Lenz] Some fiex to electrokinetics docs. ------------------------------------------ [...truncated 270 lines...] config.status: executing depfiles commands config.status: executing libtool commands config.status: executing myconfig-sample.hpp commands **************************************************************** * Configuration summary * **************************************************************** platform detected = x86_64-unknown-linux-gnu package version = 3.2.0-986-gd338451 development sources = yes Compiler -------- compiler = g++ linker = /usr/x86_64-suse-linux/bin/ld -m elf_x86_64 c++ compiler flags = -Wall -O5 c++ preprocessor flags = linker flags = -L/usr/local/cuda/lib64 libraries = -ltcl8.5 -lcufft -lcudart -lfftw3 -lm using debug flags = using profiling flags = Libraries --------- FFTW = yes efence = no Cuda ---- CUDA compiler = /usr/local/cuda/bin/nvcc CUDA flags = --ptxas-options=-v -gencode arch=compute_20,code=compute_20 Tcl/Tk ------ Tcl version = tcl8.5 Tk version = none Python ------ python = /usr/local/bin/python -B build python interface = no Other settings -------------- config = myconfig.hpp installation prefix = /home/jenkins/Espresso number of test tasks = 8 mympiexec = mpiexec = pdflatex = /usr/bin/pdflatex makeindex = /usr/bin/makeindex bibtex = /usr/bin/bibtex doxygen = /usr/bin/doxygen dot = /usr/bin/dot WARNING: MPI disabled or not supported! Parallelization turned off. Not building Python interface. END CONFIGURE + maintainer/jenkins/build.sh 23403 (process ID) old priority 0, new priority 5 srcdir= builddir= insource=true parallelism=nompi START BUILD myconfig=shanchen build_procs=4 Copying shanchen.hpp to >make -j 4 Making all in config make[1]: Entering directory ` make[1]: Nothing to be done for `all'. make[1]: Leaving directory ` Making all in src make[1]: Entering directory ` GEN config-features.hpp GEN config-features.cpp GEN myconfig-final.hpp <= ../myconfig.hpp make all-recursive make[2]: Entering directory ` Making all in . make[3]: Entering directory ` CXX cells.lo CXX config-features.lo CXX collision.lo CXX communication.lo CXX comfixed.lo CXX comforce.lo CXX constraint.lo CXX cuda_interface.lo CXX debug.lo communication.cpp: In function 'void mpi_external_potential_broadcast(int)': communication.cpp:2929:31: warning: unused variable 'e' [-Wunused-variable] CXX domain_decomposition.lo CXX electrokinetics_pdb_parse.lo CXX energy.lo CXX external_potential.lo CXX errorhandling.lo external_potential.cpp: In function 'int lattice_read_file(Lattice*, char*)': external_potential.cpp:176:46: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] CXX fft.lo CXX fft-common.lo CXX fft-dipolar.lo CXX forcecap.lo CXX forces.lo CXX galilei.lo CXX ghosts.lo CXX global.lo CXX grid.lo CXX halo.lo CXX iccp3m.lo CXX imd.lo CXX initialize.lo CXX integrate.lo CXX interaction_data.lo CXX lattice.lo CXX layered.lo CXX lb.lo CXX lb-boundaries.lo lattice.cpp: In function 'void lattice_interpolate_linear_gradient(Lattice*, double*, double*)': lattice.cpp:151:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:156:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:163:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:170:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:177:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:184:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:191:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:198:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:205:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:145:11: warning: unused variable 'w' [-Wunused-variable] lattice.cpp:145:17: warning: unused variable 'wd' [-Wunused-variable] lattice.cpp:146:12: warning: unused variable 'temp_index' [-Wunused-variable] lattice.cpp: In function 'void lattice_interpolate_linear(Lattice*, double*, double*)': lattice.cpp:253:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:260:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:234:12: warning: unused variable 'temp_index' [-Wunused-variable] CXX lbgpu.lo CXX metadynamics.lo CXX modes.lo CXX molforces.lo CXX mol_cut.lo CXX nemd.lo CXX nsquare.lo CXX particle_data.lo CXX polymer.lo CXX pressure.lo CXX random.lo CXX rattle.lo CXX reaction.lo CXX rotation.lo CXX specfunc.lo CXX statistics.lo CXX statistics_chain.lo CXX statistics_cluster.lo CXX statistics_correlation.lo CXX statistics_fluid.lo CXX statistics_molecule.lo CXX statistics_observable.lo CXX statistics_wallstuff.lo statistics_observable.cpp: In function 'int observable_calc_radial_density_profile(observable*)': statistics_observable.cpp:631:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_radial_flux_density_profile(observable*)': statistics_observable.cpp:683:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_flux_density_profile(observable*)': statistics_observable.cpp:765:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_particle_positions(observable*)': statistics_observable.cpp:801:16: warning: unused variable 'i' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_calc_particle_forces(observable*)': statistics_observable.cpp:821:16: warning: unused variable 'i' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_reset_average(observable*)': statistics_observable.cpp:885:9: warning: unused variable 'error' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_calculate(observable*)': statistics_observable.cpp:41:10: warning: 'temp' may be used uninitialized in this function [-Wmaybe-uninitialized] statistics_observable.cpp: In function 'int observable_update(observable*)': statistics_observable.cpp:49:10: warning: 'temp' may be used uninitialized in this function [-Wmaybe-uninitialized] CXX thermostat.lo CXX topology.lo CXX tuning.lo CXX uwerr.lo CXX verlet.lo CXX virtual_sites.lo CXX virtual_sites_com.lo CXX virtual_sites_relative.lo CXX vmdsock.lo CXX ghmc.lo CXX EspressoSystemInterface.lo CXX bmhtf-nacl.lo CXX buckingham.lo CXX dpd.lo CXX gaussian.lo CXX gb.lo CXX hat.lo CXX hertzian.lo CXX lj.lo CXX ljangle.lo CXX ljcos.lo CXX ljcos2.lo CXX ljgen.lo CXX morse.lo CXX soft_sphere.lo CXX steppot.lo CXX tab.lo CXX tunable_slip.lo CXX angle.lo CXX angle_harmonic.lo CXX angle_cosine.lo CXX angle_cossquare.lo CXX angledist.lo CXX dihedral.lo CXX endangledist.lo CXX fene.lo CXX harmonic.lo CXX overlap.lo CXX subt_lj.lo CXX debye_hueckel.lo CXX elc.lo CXX magnetic_non_p3m_methods.lo CXX mdlc_correction.lo CXX maggs.lo CXX mmm1d.lo CXX mmm2d.lo CXX mmm-common.lo CXX p3m.lo CXX p3m-common.lo CXX p3m-dipolar.lo CXX reaction_field.lo NVCC cuda_init_cuda.lo NVCC cuda_common_cuda.lo NVCC electrokinetics_cuda.lo NVCC lbgpu_cuda.lo lbgpu_cuda.cu(3585): error: identifier "d_v" is undefined lbgpu_cuda.cu(3527): warning: variable "delta" was set but never used lbgpu_cuda.cu(3531): warning: variable "Rho" was declared but never referenced 1 error detected in the compilation of "/tmp/tmpxft_000065a3_00000000-6_lbgpu_cuda.cpp1.ii". make[3]: *** [lbgpu_cuda.lo] Error 1 make[3]: *** Waiting for unfinished jobs.... make[3]: Leaving directory ` make[2]: *** [all-recursive] Error 1 make[2]: Leaving directory ` make[1]: *** [all] Error 2 make[1]: Leaving directory ` make: *** [all-recursive] Error 1 + exit 1 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE From MAILER-DAEMON Mon May 19 22:15:51 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WmZap-0000z8-9d for mharc-espressomd-maintainer@gnu.org; Mon, 19 May 2014 22:15:51 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:58284) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WmZah-0000yn-Kq for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 22:15:49 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WmZaZ-00062I-7y for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 22:15:43 -0400 Received: from charon-out.rus.uni-stuttgart.de ([2001:7c0:2041:25::1:1]:32774 helo=charon.rus.uni-stuttgart.de) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WmZaY-00061z-PH for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 22:15:35 -0400 Received: from localhost (localhost [127.0.0.1]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP id B220F5FDF8 for ; Tue, 20 May 2014 04:15:33 +0200 (CEST) X-Virus-Scanned: by amavisd-new at charon.rus.uni-stuttgart.de Received: from charon.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (charon.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id 7O2S6rc6GTTv for ; Tue, 20 May 2014 04:15:29 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (icp.uni-stuttgart.de [129.69.120.76]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Tue, 20 May 2014 04:15:29 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id EFE80A40FA for ; Tue, 20 May 2014 04:15:28 +0200 (CEST) Date: Tue, 20 May 2014 04:15:28 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <76566521.5.1400552128919.JavaMail.jenkins@elk> In-Reply-To: <1487999493.19.1400504202453.JavaMail.jenkins@elk> References: <1487999493.19.1400504202453.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: shanchen,3core X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2001:7c0:2041:25::1:1 Subject: [Espressomd-maintainer] =?utf-8?q?Build_failed_in_Jenkins=3A_mast?= =?utf-8?q?er-nightly-multiconfig_=C2=BB_shanchen=2C3core_=2389?= X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Tue, 20 May 2014 02:15:49 -0000 See Changes: [Olaf Lenz] Some fiex to electrokinetics docs. ------------------------------------------ [...truncated 272 lines...] config.status: creating src/acconfig.hpp config.status: executing depfiles commands config.status: executing libtool commands config.status: executing myconfig-sample.hpp commands **************************************************************** * Configuration summary * **************************************************************** platform detected = x86_64-unknown-linux-gnu package version = 3.2.0-986-gd338451 development sources = yes Compiler -------- compiler = mpic++ linker = /usr/x86_64-suse-linux/bin/ld -m elf_x86_64 c++ compiler flags = -Wall -O5 c++ preprocessor flags = linker flags = -L/usr/local/cuda/lib64 libraries = -ltcl8.5 -lcufft -lcudart -lfftw3 -lm using debug flags = using profiling flags = Libraries --------- FFTW = yes efence = no Cuda ---- CUDA compiler = /usr/local/cuda/bin/nvcc CUDA flags = --ptxas-options=-v -gencode arch=compute_20,code=compute_20 Tcl/Tk ------ Tcl version = tcl8.5 Tk version = none Python ------ python = /usr/local/bin/python -B build python interface = no Other settings -------------- config = myconfig.hpp installation prefix = /home/jenkins/Espresso number of test tasks = 8 mympiexec = mpiexec = /usr/lib64/mpi/gcc/openmpi/bin/mpiexec pdflatex = /usr/bin/pdflatex makeindex = /usr/bin/makeindex bibtex = /usr/bin/bibtex doxygen = /usr/bin/doxygen dot = /usr/bin/dot Not building Python interface. END CONFIGURE + maintainer/jenkins/build.sh 16692 (process ID) old priority 0, new priority 5 srcdir= builddir= insource=true parallelism=3core START BUILD myconfig=shanchen build_procs=4 Copying shanchen.hpp to >make -j 4 Making all in config make[1]: Entering directory ` make[1]: Nothing to be done for `all'. make[1]: Leaving directory ` Making all in src make[1]: Entering directory ` GEN myconfig-final.hpp <= ../myconfig.hpp GEN config-features.hpp GEN config-features.cpp make all-recursive make[2]: Entering directory ` Making all in . make[3]: Entering directory ` CXX config-features.lo CXX cells.lo CXX collision.lo CXX communication.lo CXX comfixed.lo CXX comforce.lo CXX constraint.lo CXX cuda_interface.lo CXX debug.lo CXX domain_decomposition.lo communication.cpp: In function 'void mpi_external_potential_broadcast(int)': communication.cpp:2929:31: warning: unused variable 'e' [-Wunused-variable] CXX electrokinetics_pdb_parse.lo CXX energy.lo CXX external_potential.lo CXX errorhandling.lo external_potential.cpp: In function 'int lattice_read_file(Lattice*, char*)': external_potential.cpp:176:46: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] CXX fft.lo CXX fft-common.lo CXX fft-dipolar.lo CXX forcecap.lo CXX forces.lo CXX galilei.lo CXX ghosts.lo CXX global.lo CXX grid.lo CXX halo.lo CXX iccp3m.lo CXX imd.lo CXX initialize.lo CXX integrate.lo CXX interaction_data.lo CXX lattice.lo CXX layered.lo lattice.cpp: In function 'void lattice_interpolate_linear_gradient(Lattice*, double*, double*)': lattice.cpp:151:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:156:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:163:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:170:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:177:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:184:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:191:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:198:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:205:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:145:11: warning: unused variable 'w' [-Wunused-variable] lattice.cpp:145:17: warning: unused variable 'wd' [-Wunused-variable] lattice.cpp:146:12: warning: unused variable 'temp_index' [-Wunused-variable] lattice.cpp: In function 'void lattice_interpolate_linear(Lattice*, double*, double*)': lattice.cpp:253:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:260:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:234:12: warning: unused variable 'temp_index' [-Wunused-variable] CXX lb.lo CXX lb-boundaries.lo CXX lbgpu.lo CXX metadynamics.lo CXX modes.lo CXX molforces.lo CXX mol_cut.lo CXX nemd.lo CXX nsquare.lo CXX particle_data.lo CXX polymer.lo CXX pressure.lo CXX random.lo CXX rattle.lo CXX reaction.lo CXX rotation.lo CXX specfunc.lo CXX statistics.lo CXX statistics_chain.lo CXX statistics_cluster.lo CXX statistics_correlation.lo CXX statistics_fluid.lo CXX statistics_molecule.lo CXX statistics_observable.lo CXX statistics_wallstuff.lo statistics_observable.cpp: In function 'int observable_calc_radial_density_profile(observable*)': statistics_observable.cpp:631:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_radial_flux_density_profile(observable*)': statistics_observable.cpp:683:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_flux_density_profile(observable*)': statistics_observable.cpp:765:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_particle_positions(observable*)': statistics_observable.cpp:801:16: warning: unused variable 'i' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_calc_particle_forces(observable*)': statistics_observable.cpp:821:16: warning: unused variable 'i' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_reset_average(observable*)': statistics_observable.cpp:885:9: warning: unused variable 'error' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_calculate(observable*)': statistics_observable.cpp:41:10: warning: 'temp' may be used uninitialized in this function [-Wmaybe-uninitialized] statistics_observable.cpp: In function 'int observable_update(observable*)': statistics_observable.cpp:49:10: warning: 'temp' may be used uninitialized in this function [-Wmaybe-uninitialized] CXX thermostat.lo CXX topology.lo CXX tuning.lo CXX uwerr.lo CXX verlet.lo CXX virtual_sites.lo CXX virtual_sites_com.lo CXX virtual_sites_relative.lo CXX vmdsock.lo CXX ghmc.lo CXX EspressoSystemInterface.lo CXX bmhtf-nacl.lo CXX buckingham.lo CXX dpd.lo CXX gaussian.lo CXX gb.lo CXX hat.lo CXX hertzian.lo CXX lj.lo CXX ljangle.lo CXX ljcos.lo CXX ljcos2.lo CXX ljgen.lo CXX morse.lo CXX soft_sphere.lo CXX steppot.lo CXX tab.lo CXX tunable_slip.lo CXX angle.lo CXX angle_harmonic.lo CXX angle_cosine.lo CXX angle_cossquare.lo CXX angledist.lo CXX dihedral.lo CXX endangledist.lo CXX fene.lo CXX harmonic.lo CXX overlap.lo CXX subt_lj.lo CXX debye_hueckel.lo CXX elc.lo CXX magnetic_non_p3m_methods.lo CXX mdlc_correction.lo CXX maggs.lo CXX mmm1d.lo CXX mmm2d.lo CXX mmm-common.lo CXX p3m.lo CXX p3m-common.lo CXX p3m-dipolar.lo CXX reaction_field.lo NVCC cuda_init_cuda.lo NVCC cuda_common_cuda.lo NVCC electrokinetics_cuda.lo NVCC lbgpu_cuda.lo lbgpu_cuda.cu(3585): error: identifier "d_v" is undefined lbgpu_cuda.cu(3527): warning: variable "delta" was set but never used lbgpu_cuda.cu(3531): warning: variable "Rho" was declared but never referenced 1 error detected in the compilation of "/tmp/tmpxft_00004b03_00000000-6_lbgpu_cuda.cpp1.ii". make[3]: *** [lbgpu_cuda.lo] Error 1 make[3]: *** Waiting for unfinished jobs.... make[3]: Leaving directory ` make[2]: *** [all-recursive] Error 1 make[2]: Leaving directory ` make[1]: *** [all] Error 2 make[1]: Leaving directory ` make: *** [all-recursive] Error 1 + exit 1 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE From MAILER-DAEMON Mon May 19 22:16:03 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WmZb1-0000zf-Cb for mharc-espressomd-maintainer@gnu.org; Mon, 19 May 2014 22:16:03 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:58338) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WmZat-0000zJ-Im for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 22:16:01 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WmZan-000653-E2 for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 22:15:55 -0400 Received: from medousa.rus.uni-stuttgart.de ([129.69.192.4]:50239) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WmZan-00064x-3l for espressomd-maintainer@nongnu.org; Mon, 19 May 2014 22:15:49 -0400 Received: from localhost (localhost [127.0.0.1]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP id ACF1A37EF7 for ; Tue, 20 May 2014 04:15:48 +0200 (CEST) X-Virus-Scanned: by amavisd-new at medousa.rus.uni-stuttgart.de Received: from medousa.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (medousa.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id TramyYwU6mUp for ; Tue, 20 May 2014 04:15:44 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (smtp.icp.uni-stuttgart.de [129.69.120.76]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Tue, 20 May 2014 04:15:44 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 2E2B2A41BC for ; Tue, 20 May 2014 04:15:44 +0200 (CEST) Date: Tue, 20 May 2014 04:15:44 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <2129227990.6.1400552144185.JavaMail.jenkins@elk> In-Reply-To: <1054701419.18.1400504195782.JavaMail.jenkins@elk> References: <1054701419.18.1400504195782.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: shanchen,4core X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.4 Subject: [Espressomd-maintainer] =?utf-8?q?Build_failed_in_Jenkins=3A_mast?= =?utf-8?q?er-nightly-multiconfig_=C2=BB_shanchen=2C4core_=2389?= X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Tue, 20 May 2014 02:16:01 -0000 See Changes: [Olaf Lenz] Some fiex to electrokinetics docs. ------------------------------------------ [...truncated 272 lines...] config.status: creating src/acconfig.hpp config.status: executing depfiles commands config.status: executing libtool commands config.status: executing myconfig-sample.hpp commands **************************************************************** * Configuration summary * **************************************************************** platform detected = x86_64-unknown-linux-gnu package version = 3.2.0-986-gd338451 development sources = yes Compiler -------- compiler = mpic++ linker = /usr/x86_64-suse-linux/bin/ld -m elf_x86_64 c++ compiler flags = -Wall -O5 c++ preprocessor flags = linker flags = -L/usr/local/cuda/lib64 libraries = -ltcl8.5 -lcufft -lcudart -lfftw3 -lm using debug flags = using profiling flags = Libraries --------- FFTW = yes efence = no Cuda ---- CUDA compiler = /usr/local/cuda/bin/nvcc CUDA flags = --ptxas-options=-v -gencode arch=compute_20,code=compute_20 Tcl/Tk ------ Tcl version = tcl8.5 Tk version = none Python ------ python = /usr/local/bin/python -B build python interface = no Other settings -------------- config = myconfig.hpp installation prefix = /home/jenkins/Espresso number of test tasks = 8 mympiexec = mpiexec = /usr/lib64/mpi/gcc/openmpi/bin/mpiexec pdflatex = /usr/bin/pdflatex makeindex = /usr/bin/makeindex bibtex = /usr/bin/bibtex doxygen = /usr/bin/doxygen dot = /usr/bin/dot Not building Python interface. END CONFIGURE + maintainer/jenkins/build.sh 20786 (process ID) old priority 0, new priority 5 srcdir= builddir= insource=true parallelism=4core START BUILD myconfig=shanchen build_procs=4 Copying shanchen.hpp to >make -j 4 Making all in config make[1]: Entering directory ` make[1]: Nothing to be done for `all'. make[1]: Leaving directory ` Making all in src make[1]: Entering directory ` GEN myconfig-final.hpp <= ../myconfig.hpp GEN config-features.hpp GEN config-features.cpp make all-recursive make[2]: Entering directory ` Making all in . make[3]: Entering directory ` CXX config-features.lo CXX cells.lo CXX collision.lo CXX communication.lo CXX comfixed.lo CXX comforce.lo CXX constraint.lo CXX cuda_interface.lo CXX debug.lo communication.cpp: In function 'void mpi_external_potential_broadcast(int)': communication.cpp:2929:31: warning: unused variable 'e' [-Wunused-variable] CXX domain_decomposition.lo CXX electrokinetics_pdb_parse.lo CXX energy.lo CXX external_potential.lo CXX errorhandling.lo CXX fft.lo CXX fft-common.lo CXX fft-dipolar.lo external_potential.cpp: In function 'int lattice_read_file(Lattice*, char*)': external_potential.cpp:176:46: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] CXX forcecap.lo CXX forces.lo CXX galilei.lo CXX ghosts.lo CXX global.lo CXX grid.lo CXX halo.lo CXX iccp3m.lo CXX imd.lo CXX initialize.lo CXX integrate.lo CXX interaction_data.lo CXX lattice.lo CXX layered.lo lattice.cpp: In function 'void lattice_interpolate_linear_gradient(Lattice*, double*, double*)': lattice.cpp:151:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:156:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:163:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:170:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:177:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:184:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:191:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:198:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:205:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:145:11: warning: unused variable 'w' [-Wunused-variable] lattice.cpp:145:17: warning: unused variable 'wd' [-Wunused-variable] lattice.cpp:146:12: warning: unused variable 'temp_index' [-Wunused-variable] lattice.cpp: In function 'void lattice_interpolate_linear(Lattice*, double*, double*)': lattice.cpp:253:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:260:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:234:12: warning: unused variable 'temp_index' [-Wunused-variable] CXX lb.lo CXX lb-boundaries.lo CXX lbgpu.lo CXX metadynamics.lo CXX modes.lo CXX molforces.lo CXX mol_cut.lo CXX nemd.lo CXX nsquare.lo CXX particle_data.lo CXX polymer.lo CXX pressure.lo CXX random.lo CXX rattle.lo CXX reaction.lo CXX rotation.lo CXX specfunc.lo CXX statistics.lo CXX statistics_chain.lo CXX statistics_cluster.lo CXX statistics_correlation.lo CXX statistics_fluid.lo CXX statistics_molecule.lo CXX statistics_observable.lo CXX statistics_wallstuff.lo CXX thermostat.lo statistics_observable.cpp: In function 'int observable_calc_radial_density_profile(observable*)': statistics_observable.cpp:631:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_radial_flux_density_profile(observable*)': statistics_observable.cpp:683:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_flux_density_profile(observable*)': statistics_observable.cpp:765:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_particle_positions(observable*)': statistics_observable.cpp:801:16: warning: unused variable 'i' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_calc_particle_forces(observable*)': statistics_observable.cpp:821:16: warning: unused variable 'i' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_reset_average(observable*)': statistics_observable.cpp:885:9: warning: unused variable 'error' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_calculate(observable*)': statistics_observable.cpp:41:10: warning: 'temp' may be used uninitialized in this function [-Wmaybe-uninitialized] statistics_observable.cpp: In function 'int observable_update(observable*)': statistics_observable.cpp:49:10: warning: 'temp' may be used uninitialized in this function [-Wmaybe-uninitialized] CXX topology.lo CXX tuning.lo CXX uwerr.lo CXX verlet.lo CXX virtual_sites.lo CXX virtual_sites_com.lo CXX virtual_sites_relative.lo CXX vmdsock.lo CXX ghmc.lo CXX EspressoSystemInterface.lo CXX bmhtf-nacl.lo CXX buckingham.lo CXX dpd.lo CXX gaussian.lo CXX gb.lo CXX hat.lo CXX hertzian.lo CXX lj.lo CXX ljangle.lo CXX ljcos.lo CXX ljcos2.lo CXX ljgen.lo CXX morse.lo CXX soft_sphere.lo CXX steppot.lo CXX tab.lo CXX tunable_slip.lo CXX angle.lo CXX angle_harmonic.lo CXX angle_cosine.lo CXX angle_cossquare.lo CXX angledist.lo CXX dihedral.lo CXX endangledist.lo CXX fene.lo CXX harmonic.lo CXX overlap.lo CXX subt_lj.lo CXX debye_hueckel.lo CXX elc.lo CXX magnetic_non_p3m_methods.lo CXX mdlc_correction.lo CXX maggs.lo CXX mmm1d.lo CXX mmm2d.lo CXX mmm-common.lo CXX p3m.lo CXX p3m-common.lo CXX p3m-dipolar.lo CXX reaction_field.lo NVCC cuda_init_cuda.lo NVCC cuda_common_cuda.lo NVCC electrokinetics_cuda.lo NVCC lbgpu_cuda.lo lbgpu_cuda.cu(3585): error: identifier "d_v" is undefined lbgpu_cuda.cu(3527): warning: variable "delta" was set but never used lbgpu_cuda.cu(3531): warning: variable "Rho" was declared but never referenced 1 error detected in the compilation of "/tmp/tmpxft_00005b49_00000000-6_lbgpu_cuda.cpp1.ii". make[3]: *** [lbgpu_cuda.lo] Error 1 make[3]: *** Waiting for unfinished jobs.... make[3]: Leaving directory ` make[2]: *** [all-recursive] Error 1 make[2]: Leaving directory ` make[1]: *** [all] Error 2 make[1]: Leaving directory ` make: *** [all-recursive] Error 1 + exit 1 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE From MAILER-DAEMON Tue May 20 03:56:05 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1Wmeu5-0000tm-K6 for mharc-espressomd-maintainer@gnu.org; Tue, 20 May 2014 03:56:05 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:57966) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wmety-0000sl-JO for espressomd-maintainer@nongnu.org; Tue, 20 May 2014 03:56:03 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1Wmetp-00017K-WB for espressomd-maintainer@nongnu.org; Tue, 20 May 2014 03:55:58 -0400 Received: from charon-out.rus.uni-stuttgart.de ([2001:7c0:2041:25::1:1]:51776 helo=charon.rus.uni-stuttgart.de) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wmetp-00016s-Hg for espressomd-maintainer@nongnu.org; Tue, 20 May 2014 03:55:49 -0400 Received: from localhost (localhost [127.0.0.1]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP id F0DCC5FE1B for ; Tue, 20 May 2014 09:55:47 +0200 (CEST) X-Virus-Scanned: by amavisd-new at charon.rus.uni-stuttgart.de Received: from charon.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (charon.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id 9G7r8g7pSd28 for ; Tue, 20 May 2014 09:55:42 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (imap.icp.uni-stuttgart.de [129.69.120.76]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Tue, 20 May 2014 09:55:42 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 796FCA40EE for ; Tue, 20 May 2014 09:55:42 +0200 (CEST) Date: Tue, 20 May 2014 09:55:42 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <588733571.7.1400572542477.JavaMail.jenkins@elk> In-Reply-To: <1590606171.3.1400540270163.JavaMail.jenkins@elk> References: <1590606171.3.1400540270163.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: quoted-printable X-Jenkins-Job: master-nightly-distcheck X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2001:7c0:2041:25::1:1 Subject: [Espressomd-maintainer] Build failed in Jenkins: master-nightly-distcheck #80 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Tue, 20 May 2014 07:56:03 -0000 See Changes: [Stefan Kesselheim] important fix to lattice interpolation [Stefan Kesselheim] removed warning message [Stefan Kesselheim] added small fix for lb_radial_velocity_profile with SHA= NCHEN ------------------------------------------ [...truncated 1316 lines...] make[3]: Leaving directory ` Making dvi in tutorials make[3]: Entering directory ` Making dvi in 01-lennard_jones make[4]: Entering directory ` make[4]: Nothing to be done for `dvi'. make[4]: Leaving directory ` Making dvi in 02-charged_system make[4]: Entering directory ` make[4]: Nothing to be done for `dvi'. make[4]: Leaving directory ` Making dvi in 03-object_in_fluid make[4]: Entering directory ` make[4]: Nothing to be done for `dvi'. make[4]: Leaving directory ` make[4]: Entering directory ` make[4]: Nothing to be done for `dvi-am'. make[4]: Leaving directory ` make[3]: Leaving directory ` make[3]: Entering directory ` make[3]: Nothing to be done for `dvi-am'. make[3]: Leaving directory ` make[2]: Leaving directory ` make[1]: Leaving directory ` make[1]: Entering directory ` Making check in config make[2]: Entering directory ` make[2]: Nothing to be done for `check'. make[2]: Leaving directory ` Making check in src make[2]: Entering directory ` GEN myconfig-final.hpp <=3D ../../src/myconfig-default.hpp make check-recursive make[3]: Entering directory ` Making check in . make[4]: Entering directory ` GEN myconfig-final.hpp <=3D ../../src/myconfig-default.hpp GEN config-version.cpp make[4]: Leaving directory ` Making check in tcl make[4]: Entering directory ` make[4]: Nothing to be done for `check'. make[4]: Leaving directory ` make[3]: Leaving directory ` make[2]: Leaving directory ` Making check in . make[2]: Entering directory ` test -L Espresso || ln -s src/tcl/Espresso . make[2]: Leaving directory ` Making check in scripts make[2]: Entering directory ` for file in init.tcl ABHmath.tcl auxiliary.tcl blockfile_support.tcl bundle= .tcl countBonds.tcl dielectrics.tcl gibbs_ghmc.tcl object_in_fluid.tcl para= llel_tempering.tcl pdb.tcl polymer.tcl statistics.tcl vtf.tcl vtk.tcl; do \ if test ! -e $file || test ! $file -ef then \ /usr/bin/install -c -m 644 \ fi; \ done make check-local make[3]: Entering directory ` for file in init.tcl ABHmath.tcl auxiliary.tcl blockfile_support.tcl bundle= .tcl countBonds.tcl dielectrics.tcl gibbs_ghmc.tcl object_in_fluid.tcl para= llel_tempering.tcl pdb.tcl polymer.tcl statistics.tcl vtf.tcl vtk.tcl; do \ if test ! -e $file || test ! $file -ef then \ /usr/bin/install -c -m 644 \ fi; \ done make[3]: Leaving directory ` make[2]: Leaving directory ` Making check in tools make[2]: Entering directory ` make[2]: Nothing to be done for `check'. make[2]: Leaving directory ` Making check in testsuite make[2]: Entering directory ` make check-local make[3]: Entering directory ` if test -n ""; then \ ./runtest.sh -p "" analysis.tcl angle.tcl collision-detection-centers.tcl= collision-detection-poc.tcl comforce.tcl comfixed.tcl command_syntax.tcl c= onstraints.tcl constraints_reflecting.tcl correlation.tcl constraints_rhomb= oid.tcl dh.tcl dielectric.tcl ek_eof_one_species_x.tcl ek_eof_one_species_y= .tcl ek_eof_one_species_z.tcl ek_reaction.tcl el2d.tcl el2d_die.tcl el2d_no= nneutral.tcl exclusions.tcl external_potential.tcl fene.tcl gb.tcl ghmc.tcl= harm.tcl iccp3m.tcl intpbc.tcl intppbc.tcl kinetic.tcl langevin.tcl layere= d.tcl lb.tcl lb_fluid_coupling.tcl lb_fluid_coupling_gpu.tcl lb_gpu.tcl lb_= planar.tcl lb_planar_gpu.tcl lb_planar_embedded_particles.tcl lb_planar_emb= edded_particles_gpu.tcl lb_stokes_sphere.tcl lb_stokes_sphere_gpu.tcl lj.tc= l lj-cos.tcl lj-generic.tcl madelung.tcl maggs.tcl magnetic-field.tcl mass.= tcl mass-and-rinertia.tcl mdlc.tcl mmm1d.tcl npt.tcl nsquare.tcl nve_pe.tcl= object_in_fluid.tcl object_in_fluid_gpu.tcl observable.tcl p3m.tcl p3m_gpu= .tcl p3m_magnetostatics.tcl p3m_magnetostatics2.tcl p3m_simple_noncubic.tcl= p3m_wall.tcl p3m_wall_gpu.tcl rotation.tcl rotation_per_particle.tcl sc_fl= uid_gpu.tcl tabulated.tcl tunable_slip.tcl uwerr.tcl virtual-sites.tcl; \ else \ ./runtest.sh analysis.tcl angle.tcl collision-detection-centers.tcl colli= sion-detection-poc.tcl comforce.tcl comfixed.tcl command_syntax.tcl constra= ints.tcl constraints_reflecting.tcl correlation.tcl constraints_rhomboid.tc= l dh.tcl dielectric.tcl ek_eof_one_species_x.tcl ek_eof_one_species_y.tcl e= k_eof_one_species_z.tcl ek_reaction.tcl el2d.tcl el2d_die.tcl el2d_nonneutr= al.tcl exclusions.tcl external_potential.tcl fene.tcl gb.tcl ghmc.tcl harm.= tcl iccp3m.tcl intpbc.tcl intppbc.tcl kinetic.tcl langevin.tcl layered.tcl = lb.tcl lb_fluid_coupling.tcl lb_fluid_coupling_gpu.tcl lb_gpu.tcl lb_planar= .tcl lb_planar_gpu.tcl lb_planar_embedded_particles.tcl lb_planar_embedded_= particles_gpu.tcl lb_stokes_sphere.tcl lb_stokes_sphere_gpu.tcl lj.tcl lj-c= os.tcl lj-generic.tcl madelung.tcl maggs.tcl magnetic-field.tcl mass.tcl ma= ss-and-rinertia.tcl mdlc.tcl mmm1d.tcl npt.tcl nsquare.tcl nve_pe.tcl objec= t_in_fluid.tcl object_in_fluid_gpu.tcl observable.tcl p3m.tcl p3m_gpu.tcl p= 3m_magnetostatics.tcl p3m_magnetostatics2.tcl p3m_simple_noncubic.tcl p3m_w= all.tcl p3m_wall_gpu.tcl rotation.tcl rotation_per_particle.tcl sc_fluid_gp= u.tcl tabulated.tcl tunable_slip.tcl uwerr.tcl virtual-sites.tcl; \ fi ln -s ../../testsuite/analysis_system.data.00.gz . ln -s ../../testsuite/analysis_system.data.01.gz . ln -s ../../testsuite/analysis_system.data.02.gz . ln -s ../../testsuite/analysis_system.data.03.gz . ln -s ../../testsuite/analysis_system.data.04.gz . ln -s ../../testsuite/analysis_system.data.05.gz . ln -s ../../testsuite/analysis_system.data.06.gz . ln -s ../../testsuite/analysis_system.data.07.gz . ln -s ../../testsuite/analysis_system.data.08.gz . ln -s ../../testsuite/analysis_system.data.09.gz . ln -s ../../testsuite/analysis_system.data.10.gz . ln -s ../../testsuite/analysis.tcl . ln -s ../../testsuite/angle.tcl . ln -s ../../testsuite/collision-detection-centers.tcl . ln -s ../../testsuite/collision-detection-poc.tcl . ln -s ../../testsuite/comfixed_system.data . ln -s ../../testsuite/comfixed.tcl . ln -s ../../testsuite/comforce_system.data . ln -s ../../testsuite/comforce.tcl . ln -s ../../testsuite/command_syntax.tcl . ln -s ../../testsuite/constraints_reflecting.tcl . ln -s ../../testsuite/constraints_rhomboid.tcl . ln -s ../../testsuite/constraints_system.data . ln -s ../../testsuite/constraints.tcl . ln -s ../../testsuite/correlation.tcl . ln -s ../../testsuite/dh_system.data . ln -s ../../testsuite/dh.tcl . ln -s ../../testsuite/dielectric.tcl . ln -s ../../testsuite/ek_eof_one_species_x.tcl . ln -s ../../testsuite/ek_eof_one_species_y.tcl . ln -s ../../testsuite/ek_eof_one_species_z.tcl . ln -s ../../testsuite/ek_reaction.tcl . ln -s ../../testsuite/el2d_die.tcl . ln -s ../../testsuite/el2d_nonneutral.tcl . ln -s ../../testsuite/el2d_system.data . ln -s ../../testsuite/el2d_system_die.data . ln -s ../../testsuite/el2d.tcl . ln -s ../../testsuite/exclusions.tcl . ln -s ../../testsuite/external_potential.tcl . ln -s ../../testsuite/fene_system.data.gz . ln -s ../../testsuite/fene.tcl . ln -s ../../testsuite/gb_system.data . ln -s ../../testsuite/gb.tcl . ln -s ../../testsuite/ghmc.tcl . ln -s ../../testsuite/harm_system.data.gz . ln -s ../../testsuite/harm.tcl . ln -s ../../testsuite/iccp3m.tcl . ln -s ../../testsuite/intpbc_system.data.gz . ln -s ../../testsuite/intpbc.tcl . ln -s ../../testsuite/intppbc_system.data.gz . ln -s ../../testsuite/intppbc.tcl . ln -s ../../testsuite/kinetic.tcl . ln -s ../../testsuite/langevin.tcl . ln -s ../../testsuite/layered.tcl . ln -s ../../testsuite/lb_fluid_coupling_gpu.tcl . ln -s ../../testsuite/lb_fluid_coupling.tcl . ln -s ../../testsuite/lb_gpu.tcl . ln -s ../../testsuite/lb_planar_embedded_particles_gpu.tcl . ln -s ../../testsuite/lb_planar_embedded_particles.tcl . ln -s ../../testsuite/lb_planar_gpu.tcl . ln -s ../../testsuite/lb_planar.tcl . ln -s ../../testsuite/lb_stokes_sphere_gpu.tcl . ln -s ../../testsuite/lb_stokes_sphere.tcl . ln -s ../../testsuite/lb_system.data . ln -s ../../testsuite/lb.tcl . ln -s ../../testsuite/lj1.tab . ln -s ../../testsuite/lj2.tab . ln -s ../../testsuite/lj3.tab . ln -s ../../testsuite/lj-cos_system.data . ln -s ../../testsuite/lj-cos.tcl . ln -s ../../testsuite/lj-generic.tcl . ln -s ../../testsuite/lj_system.data . ln -s ../../testsuite/lj.tcl . ln -s ../../testsuite/madelung.tcl . ln -s ../../testsuite/maggs_correct_rdf.data . ln -s ../../testsuite/maggs.tcl . ln -s ../../testsuite/magnetic-field.tcl . ln -s ../../testsuite/Makefile.am . ln -s ../../testsuite/Makefile.in . ln -s ../../testsuite/mass-and-rinertia.tcl . ln -s ../../testsuite/mass_system.data . ln -s ../../testsuite/mass.tcl . ln -s ../../testsuite/mdlc_expected_energy.data . ln -s ../../testsuite/mdlc_expected_force_torque.data . ln -s ../../testsuite/mdlc_system.data . ln -s ../../testsuite/mdlc.tcl . ln -s ../../testsuite/mmm1d_system.data . ln -s ../../testsuite/mmm1d.tcl . ln -s ../../testsuite/npt_lj_system.data . ln -s ../../testsuite/npt.tcl . ln -s ../../testsuite/nsquare.tcl . ln -s ../../testsuite/nve_pe.tcl . ln -s ../../testsuite/object_in_fluid_gpu.tcl . ln -s ../../testsuite/object_in_fluid_system-final.data . ln -s ../../testsuite/object_in_fluid_system-init.data . ln -s ../../testsuite/object_in_fluid_system-nodes.data . ln -s ../../testsuite/object_in_fluid_system-triangles.data . ln -s ../../testsuite/object_in_fluid.tcl . ln -s ../../testsuite/observable.tcl . ln -s ../../testsuite/p3m_gpu.tcl . ln -s ../../testsuite/p3m_magnetostatics2_expected.data . ln -s ../../testsuite/p3m_magnetostatics2_system.data . ln -s ../../testsuite/p3m_magnetostatics2.tcl . ln -s ../../testsuite/p3m_magnetostatics.data . ln -s ../../testsuite/p3m_magnetostatics.tcl . ln -s ../../testsuite/p3m_simple_noncubic.tcl . ln -s ../../testsuite/p3m_system.data . ln -s ../../testsuite/p3m.tcl . ln -s ../../testsuite/p3m_wall_gpu.tcl . ln -s ../../testsuite/p3m_wall_system.data . ln -s ../../testsuite/p3m_wall.tcl . ln -s ../../testsuite/pe_micelle.data . ln -s ../../testsuite/pe_micelle.tcl . ln -s ../../testsuite/rotation_per_particle.tcl . ln -s ../../testsuite/rotation.tcl . ln -s ../../testsuite/runtest.sh.in . ln -s ../../testsuite/sc_fluid_gpu.tcl . ln -s ../../testsuite/tabulated_system.data . ln -s ../../testsuite/tabulated.tcl . ln -s ../../testsuite/tests_common.tcl . ln -s ../../testsuite/thermostat.data . ln -s ../../testsuite/thermostat_rot.data . ln -s ../../testsuite/tunable_slip.tcl . ln -s ../../testsuite/uwerr.data . ln -s ../../testsuite/uwerr.tcl . ln -s ../../testsuite/virtual-sites.tcl . ** RUNNING TESTSUITE FOR 8 tasks analysis.tcl - ok angle.tcl - ok collision-detection-centers.tcl - ignored collision-detection-poc.tcl - ignored comforce.tcl - ignored comfixed.tcl - ignored command_syntax.tcl - ok constraints.tcl - ok constraints_reflecting.tcl - ok correlation.tcl - ok constraints_rhomboid.tcl - ok dh.tcl - ok dielectric.tcl - ok ek_eof_one_species_x.tcl - ignored ek_eof_one_species_y.tcl - ignored ek_eof_one_species_z.tcl - ignored ek_reaction.tcl - ignored el2d.tcl - ok el2d_die.tcl - ok el2d_nonneutral.tcl - ok exclusions.tcl - ok external_potential.tcl - ERROR (code=3D1) Some test cases failed with 8 tasks, interrupting test suite. ************************************************** ** Not all test cases were successful! ** Have a look at the file testsuite/runtest.log ** for the output of the testcases. ************************************************** ** The testsuite was interrupted! ************************************************** make[3]: *** [check-local] Error 1 make[3]: Leaving directory ` make[2]: *** [check-am] Error 2 make[2]: Leaving directory ` make[1]: *** [check-recursive] Error 1 make[1]: Leaving directory ` make: *** [distcheck] Error 1 + exit 1 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE Archiving artifacts From MAILER-DAEMON Tue May 20 04:07:04 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1Wmf4i-00037U-84 for mharc-espressomd-maintainer@gnu.org; Tue, 20 May 2014 04:07:04 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:60052) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wmf4a-00036x-34 for espressomd-maintainer@nongnu.org; Tue, 20 May 2014 04:07:03 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1Wmf4T-0004dz-34 for espressomd-maintainer@nongnu.org; Tue, 20 May 2014 04:06:56 -0400 Received: from hydra-out.rus.uni-stuttgart.de ([2001:7c0:2041:25::1:3]:53902 helo=hydra.rus.uni-stuttgart.de) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wmf4S-0004bz-T0 for espressomd-maintainer@nongnu.org; Tue, 20 May 2014 04:06:49 -0400 Received: from localhost (localhost [127.0.0.1]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP id 5B42112B759 for ; Tue, 20 May 2014 10:06:47 +0200 (CEST) X-Virus-Scanned: by amavisd-new at hydra.rus.uni-stuttgart.de Received: from hydra.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (hydra.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id Mzo5tddD5FSe for ; Tue, 20 May 2014 10:06:42 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (anoa.icp.uni-stuttgart.de [129.69.120.76]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Tue, 20 May 2014 10:06:42 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id E13F0A40EE for ; Tue, 20 May 2014 10:06:42 +0200 (CEST) Date: Tue, 20 May 2014 10:06:42 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <248706231.8.1400573202907.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: empty,3core X-Jenkins-Result: SUCCESS X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2001:7c0:2041:25::1:3 Subject: [Espressomd-maintainer] =?utf-8?q?Jenkins_build_is_back_to_stable?= =?utf-8?q?_=3A_master-nightly-multiconfig_=C2=BB_empty=2C3core_=2390?= X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Tue, 20 May 2014 08:07:03 -0000 See From MAILER-DAEMON Tue May 20 04:11:33 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1Wmf92-0004qA-Q1 for mharc-espressomd-maintainer@gnu.org; Tue, 20 May 2014 04:11:32 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:60963) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wmf8u-0004dx-IU for espressomd-maintainer@nongnu.org; Tue, 20 May 2014 04:11:31 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1Wmf8n-0006D7-Kg for espressomd-maintainer@nongnu.org; Tue, 20 May 2014 04:11:24 -0400 Received: from hydra-out.rus.uni-stuttgart.de ([2001:7c0:2041:25::1:3]:32869 helo=hydra.rus.uni-stuttgart.de) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wmf8n-0006D0-El for espressomd-maintainer@nongnu.org; Tue, 20 May 2014 04:11:17 -0400 Received: from localhost (localhost [127.0.0.1]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP id 0527512C6B0 for ; Tue, 20 May 2014 10:11:17 +0200 (CEST) X-Virus-Scanned: by amavisd-new at hydra.rus.uni-stuttgart.de Received: from hydra.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (hydra.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id oosMk9AxvZ-8 for ; Tue, 20 May 2014 10:11:12 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (icp.uni-stuttgart.de [129.69.120.76]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Tue, 20 May 2014 10:11:12 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 90918A40F1 for ; Tue, 20 May 2014 10:10:42 +0200 (CEST) Date: Tue, 20 May 2014 10:10:42 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <468186446.10.1400573442582.JavaMail.jenkins@elk> In-Reply-To: <577579005.4.1400552118718.JavaMail.jenkins@elk> References: <577579005.4.1400552118718.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: shanchen,nompi X-Jenkins-Result: SUCCESS X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2001:7c0:2041:25::1:3 Subject: [Espressomd-maintainer] =?utf-8?q?Jenkins_build_is_back_to_normal?= =?utf-8?q?_=3A_master-nightly-multiconfig_=C2=BB_shanchen=2Cnompi_=2391?= X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Tue, 20 May 2014 08:11:31 -0000 See From MAILER-DAEMON Tue May 20 04:12:05 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1Wmf9Z-0004zh-3j for mharc-espressomd-maintainer@gnu.org; Tue, 20 May 2014 04:12:05 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:32841) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wmf9Q-0004yX-UB for espressomd-maintainer@nongnu.org; Tue, 20 May 2014 04:12:03 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1Wmf9K-0006Qi-3P for espressomd-maintainer@nongnu.org; Tue, 20 May 2014 04:11:56 -0400 Received: from medousa.rus.uni-stuttgart.de ([129.69.192.4]:34036) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wmf9J-0006QO-TX for espressomd-maintainer@nongnu.org; Tue, 20 May 2014 04:11:50 -0400 Received: from localhost (localhost [127.0.0.1]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP id D99D337F0E for ; Tue, 20 May 2014 10:11:48 +0200 (CEST) X-Virus-Scanned: by amavisd-new at medousa.rus.uni-stuttgart.de Received: from medousa.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (medousa.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id RLoD_tveHtfw for ; Tue, 20 May 2014 10:10:20 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (ica1.uni-stuttgart.de [129.69.120.76]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Tue, 20 May 2014 10:10:20 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 7105AA40EE for ; Tue, 20 May 2014 10:09:50 +0200 (CEST) Date: Tue, 20 May 2014 10:09:50 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <650075938.9.1400573390372.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: default,3core X-Jenkins-Result: SUCCESS X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.4 Subject: [Espressomd-maintainer] =?utf-8?q?Jenkins_build_is_back_to_stable?= =?utf-8?q?_=3A_master-nightly-multiconfig_=C2=BB_default=2C3core_=2391?= X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Tue, 20 May 2014 08:12:04 -0000 See From MAILER-DAEMON Tue May 20 04:12:18 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1Wmf9m-00050q-7Q for mharc-espressomd-maintainer@gnu.org; Tue, 20 May 2014 04:12:18 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:32949) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wmf9d-000509-QU for espressomd-maintainer@nongnu.org; Tue, 20 May 2014 04:12:16 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1Wmf9W-0006gL-T6 for espressomd-maintainer@nongnu.org; Tue, 20 May 2014 04:12:09 -0400 Received: from medousa.rus.uni-stuttgart.de ([129.69.192.4]:34129) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wmf9W-0006g4-NX for espressomd-maintainer@nongnu.org; Tue, 20 May 2014 04:12:02 -0400 Received: from localhost (localhost [127.0.0.1]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP id 5403B37F11 for ; Tue, 20 May 2014 10:12:02 +0200 (CEST) X-Virus-Scanned: by amavisd-new at medousa.rus.uni-stuttgart.de Received: from medousa.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (medousa.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id dgQA8vmxrZPQ for ; Tue, 20 May 2014 10:11:57 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (imap.icp.uni-stuttgart.de [129.69.120.76]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Tue, 20 May 2014 10:11:57 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 3125AA40FC for ; Tue, 20 May 2014 10:11:46 +0200 (CEST) Date: Tue, 20 May 2014 10:11:46 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1690744920.12.1400573506198.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: tunableslip,3core X-Jenkins-Result: SUCCESS X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.4 Subject: [Espressomd-maintainer] =?utf-8?q?Jenkins_build_is_back_to_stable?= =?utf-8?q?_=3A_master-nightly-multiconfig_=C2=BB_tunableslip=2C3core_=239?= =?utf-8?q?1?= X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Tue, 20 May 2014 08:12:16 -0000 See From MAILER-DAEMON Tue May 20 04:12:20 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1Wmf9o-00051T-EB for mharc-espressomd-maintainer@gnu.org; Tue, 20 May 2014 04:12:20 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:32951) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wmf9d-00050A-RE for espressomd-maintainer@nongnu.org; Tue, 20 May 2014 04:12:18 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1Wmf9W-0006g0-Ga for espressomd-maintainer@nongnu.org; Tue, 20 May 2014 04:12:09 -0400 Received: from medousa-out.rus.uni-stuttgart.de ([2001:7c0:2041:25::1:4]:47008 helo=medousa.rus.uni-stuttgart.de) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wmf9W-0006fr-9h for espressomd-maintainer@nongnu.org; Tue, 20 May 2014 04:12:02 -0400 Received: from localhost (localhost [127.0.0.1]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP id 6058937F10 for ; Tue, 20 May 2014 10:12:01 +0200 (CEST) X-Virus-Scanned: by amavisd-new at medousa.rus.uni-stuttgart.de Received: from medousa.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (medousa.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id nE1kx6u7USs4 for ; Tue, 20 May 2014 10:11:56 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (smtp.icp.uni-stuttgart.de [129.69.120.76]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Tue, 20 May 2014 10:11:56 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id E8CFCA40EE for ; Tue, 20 May 2014 10:11:56 +0200 (CEST) Date: Tue, 20 May 2014 10:11:56 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1272061939.13.1400573516948.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: rest1,3core X-Jenkins-Result: SUCCESS X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2001:7c0:2041:25::1:4 Subject: [Espressomd-maintainer] =?utf-8?q?Jenkins_build_is_back_to_stable?= =?utf-8?q?_=3A_master-nightly-multiconfig_=C2=BB_rest1=2C3core_=2391?= X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Tue, 20 May 2014 08:12:18 -0000 See From MAILER-DAEMON Tue May 20 04:12:22 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1Wmf9q-00051j-Hl for mharc-espressomd-maintainer@gnu.org; Tue, 20 May 2014 04:12:22 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:33007) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wmf9i-00050H-Kb for espressomd-maintainer@nongnu.org; Tue, 20 May 2014 04:12:21 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1Wmf9b-0006i6-MX for espressomd-maintainer@nongnu.org; Tue, 20 May 2014 04:12:14 -0400 Received: from medousa.rus.uni-stuttgart.de ([129.69.192.4]:34257) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wmf9b-0006hv-Gg for espressomd-maintainer@nongnu.org; Tue, 20 May 2014 04:12:07 -0400 Received: from localhost (localhost [127.0.0.1]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP id 1310C37F0F for ; Tue, 20 May 2014 10:12:07 +0200 (CEST) X-Virus-Scanned: by amavisd-new at medousa.rus.uni-stuttgart.de Received: from medousa.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (medousa.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id eA9gig_FHd5l for ; Tue, 20 May 2014 10:12:02 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (imap.icp.uni-stuttgart.de [129.69.120.76]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Tue, 20 May 2014 10:12:02 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id EE614A40F1 for ; Tue, 20 May 2014 10:12:02 +0200 (CEST) Date: Tue, 20 May 2014 10:12:02 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1707627581.15.1400573522974.JavaMail.jenkins@elk> In-Reply-To: <76566521.5.1400552128919.JavaMail.jenkins@elk> References: <76566521.5.1400552128919.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: shanchen,3core X-Jenkins-Result: SUCCESS X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.4 Subject: [Espressomd-maintainer] =?utf-8?q?Jenkins_build_is_back_to_normal?= =?utf-8?q?_=3A_master-nightly-multiconfig_=C2=BB_shanchen=2C3core_=2391?= X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Tue, 20 May 2014 08:12:21 -0000 See From MAILER-DAEMON Tue May 20 04:12:24 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1Wmf9s-00052A-Kd for mharc-espressomd-maintainer@gnu.org; Tue, 20 May 2014 04:12:24 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:33035) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wmf9k-00050S-Nh for espressomd-maintainer@nongnu.org; Tue, 20 May 2014 04:12:23 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1Wmf9b-0006iB-Mm for espressomd-maintainer@nongnu.org; Tue, 20 May 2014 04:12:16 -0400 Received: from medousa.rus.uni-stuttgart.de ([129.69.192.4]:34256) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wmf9b-0006hw-Gs for espressomd-maintainer@nongnu.org; Tue, 20 May 2014 04:12:07 -0400 Received: from localhost (localhost [127.0.0.1]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP id 1830B37F10 for ; Tue, 20 May 2014 10:12:07 +0200 (CEST) X-Virus-Scanned: by amavisd-new at medousa.rus.uni-stuttgart.de Received: from medousa.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (medousa.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id f45aW6Yg9RCy for ; Tue, 20 May 2014 10:12:02 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (smtp.icp.uni-stuttgart.de [129.69.120.76]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Tue, 20 May 2014 10:12:02 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id BC064A40EE for ; Tue, 20 May 2014 10:12:02 +0200 (CEST) Date: Tue, 20 May 2014 10:12:02 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <121522674.14.1400573522767.JavaMail.jenkins@elk> In-Reply-To: <2129227990.6.1400552144185.JavaMail.jenkins@elk> References: <2129227990.6.1400552144185.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: shanchen,4core X-Jenkins-Result: SUCCESS X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.4 Subject: [Espressomd-maintainer] =?utf-8?q?Jenkins_build_is_back_to_normal?= =?utf-8?q?_=3A_master-nightly-multiconfig_=C2=BB_shanchen=2C4core_=2391?= X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Tue, 20 May 2014 08:12:23 -0000 See From MAILER-DAEMON Tue May 20 04:12:18 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1Wmf9m-00050z-A9 for mharc-espressomd-maintainer@gnu.org; Tue, 20 May 2014 04:12:18 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:32947) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wmf9d-000508-M3 for espressomd-maintainer@nongnu.org; Tue, 20 May 2014 04:12:16 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1Wmf9T-0006fY-5j for espressomd-maintainer@nongnu.org; Tue, 20 May 2014 04:12:09 -0400 Received: from hydra-out.rus.uni-stuttgart.de ([2001:7c0:2041:25::1:3]:34428 helo=hydra.rus.uni-stuttgart.de) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wmf9S-0006fP-VG for espressomd-maintainer@nongnu.org; Tue, 20 May 2014 04:11:59 -0400 Received: from localhost (localhost [127.0.0.1]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP id 854CF12C6A4 for ; Tue, 20 May 2014 10:11:58 +0200 (CEST) X-Virus-Scanned: by amavisd-new at hydra.rus.uni-stuttgart.de Received: from hydra.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (hydra.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id n7O4fjSJuuHB for ; Tue, 20 May 2014 10:11:54 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (icp.uni-stuttgart.de [129.69.120.76]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Tue, 20 May 2014 10:11:54 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 0B01DA40F1 for ; Tue, 20 May 2014 10:11:45 +0200 (CEST) Date: Tue, 20 May 2014 10:11:44 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1743537679.11.1400573504991.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: rest2,3core X-Jenkins-Result: SUCCESS X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2001:7c0:2041:25::1:3 Subject: [Espressomd-maintainer] =?utf-8?q?Jenkins_build_is_back_to_stable?= =?utf-8?q?_=3A_master-nightly-multiconfig_=C2=BB_rest2=2C3core_=2391?= X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Tue, 20 May 2014 08:12:16 -0000 See From MAILER-DAEMON Tue May 20 04:12:48 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WmfAG-00052s-OX for mharc-espressomd-maintainer@gnu.org; Tue, 20 May 2014 04:12:48 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:33175) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WmfAA-00052f-Gl for espressomd-maintainer@nongnu.org; Tue, 20 May 2014 04:12:47 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WmfA4-0006qi-KJ for espressomd-maintainer@nongnu.org; Tue, 20 May 2014 04:12:42 -0400 Received: from hydra-out.rus.uni-stuttgart.de ([2001:7c0:2041:25::1:3]:52768 helo=hydra.rus.uni-stuttgart.de) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WmfA4-0006qT-5k for espressomd-maintainer@nongnu.org; Tue, 20 May 2014 04:12:36 -0400 Received: from localhost (localhost [127.0.0.1]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP id B4BC212C6D1 for ; Tue, 20 May 2014 10:12:35 +0200 (CEST) X-Virus-Scanned: by amavisd-new at hydra.rus.uni-stuttgart.de Received: from hydra.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (hydra.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id w3oUbQwsAIAH for ; Tue, 20 May 2014 10:12:30 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (anoa.ica1.uni-stuttgart.de [129.69.120.76]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Tue, 20 May 2014 10:12:30 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 475FCA40FA for ; Tue, 20 May 2014 10:12:30 +0200 (CEST) Date: Tue, 20 May 2014 10:12:30 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <539216933.17.1400573550277.JavaMail.jenkins@elk> In-Reply-To: <588733571.7.1400572542477.JavaMail.jenkins@elk> References: <588733571.7.1400572542477.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: quoted-printable X-Jenkins-Job: master-nightly-distcheck X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2001:7c0:2041:25::1:3 Subject: [Espressomd-maintainer] Build failed in Jenkins: master-nightly-distcheck #81 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Tue, 20 May 2014 08:12:47 -0000 See Changes: [Stefan Kesselheim] important fix to lattice interpolation [Stefan Kesselheim] removed warning message [Stefan Kesselheim] added small fix for lb_radial_velocity_profile with SHA= NCHEN ------------------------------------------ [...truncated 1316 lines...] make[3]: Leaving directory ` Making dvi in tutorials make[3]: Entering directory ` Making dvi in 01-lennard_jones make[4]: Entering directory ` make[4]: Nothing to be done for `dvi'. make[4]: Leaving directory ` Making dvi in 02-charged_system make[4]: Entering directory ` make[4]: Nothing to be done for `dvi'. make[4]: Leaving directory ` Making dvi in 03-object_in_fluid make[4]: Entering directory ` make[4]: Nothing to be done for `dvi'. make[4]: Leaving directory ` make[4]: Entering directory ` make[4]: Nothing to be done for `dvi-am'. make[4]: Leaving directory ` make[3]: Leaving directory ` make[3]: Entering directory ` make[3]: Nothing to be done for `dvi-am'. make[3]: Leaving directory ` make[2]: Leaving directory ` make[1]: Leaving directory ` make[1]: Entering directory ` Making check in config make[2]: Entering directory ` make[2]: Nothing to be done for `check'. make[2]: Leaving directory ` Making check in src make[2]: Entering directory ` GEN myconfig-final.hpp <=3D ../../src/myconfig-default.hpp make check-recursive make[3]: Entering directory ` Making check in . make[4]: Entering directory ` GEN myconfig-final.hpp <=3D ../../src/myconfig-default.hpp GEN config-version.cpp make[4]: Leaving directory ` Making check in tcl make[4]: Entering directory ` make[4]: Nothing to be done for `check'. make[4]: Leaving directory ` make[3]: Leaving directory ` make[2]: Leaving directory ` Making check in . make[2]: Entering directory ` test -L Espresso || ln -s src/tcl/Espresso . make[2]: Leaving directory ` Making check in scripts make[2]: Entering directory ` for file in init.tcl ABHmath.tcl auxiliary.tcl blockfile_support.tcl bundle= .tcl countBonds.tcl dielectrics.tcl gibbs_ghmc.tcl object_in_fluid.tcl para= llel_tempering.tcl pdb.tcl polymer.tcl statistics.tcl vtf.tcl vtk.tcl; do \ if test ! -e $file || test ! $file -ef then \ /usr/bin/install -c -m 644 \ fi; \ done make check-local make[3]: Entering directory ` for file in init.tcl ABHmath.tcl auxiliary.tcl blockfile_support.tcl bundle= .tcl countBonds.tcl dielectrics.tcl gibbs_ghmc.tcl object_in_fluid.tcl para= llel_tempering.tcl pdb.tcl polymer.tcl statistics.tcl vtf.tcl vtk.tcl; do \ if test ! -e $file || test ! $file -ef then \ /usr/bin/install -c -m 644 \ fi; \ done make[3]: Leaving directory ` make[2]: Leaving directory ` Making check in tools make[2]: Entering directory ` make[2]: Nothing to be done for `check'. make[2]: Leaving directory ` Making check in testsuite make[2]: Entering directory ` make check-local make[3]: Entering directory ` if test -n ""; then \ ./runtest.sh -p "" analysis.tcl angle.tcl collision-detection-centers.tcl= collision-detection-poc.tcl comforce.tcl comfixed.tcl command_syntax.tcl c= onstraints.tcl constraints_reflecting.tcl correlation.tcl constraints_rhomb= oid.tcl dh.tcl dielectric.tcl ek_eof_one_species_x.tcl ek_eof_one_species_y= .tcl ek_eof_one_species_z.tcl ek_reaction.tcl el2d.tcl el2d_die.tcl el2d_no= nneutral.tcl exclusions.tcl external_potential.tcl fene.tcl gb.tcl ghmc.tcl= harm.tcl iccp3m.tcl intpbc.tcl intppbc.tcl kinetic.tcl langevin.tcl layere= d.tcl lb.tcl lb_fluid_coupling.tcl lb_fluid_coupling_gpu.tcl lb_gpu.tcl lb_= planar.tcl lb_planar_gpu.tcl lb_planar_embedded_particles.tcl lb_planar_emb= edded_particles_gpu.tcl lb_stokes_sphere.tcl lb_stokes_sphere_gpu.tcl lj.tc= l lj-cos.tcl lj-generic.tcl madelung.tcl maggs.tcl magnetic-field.tcl mass.= tcl mass-and-rinertia.tcl mdlc.tcl mmm1d.tcl npt.tcl nsquare.tcl nve_pe.tcl= object_in_fluid.tcl object_in_fluid_gpu.tcl observable.tcl p3m.tcl p3m_gpu= .tcl p3m_magnetostatics.tcl p3m_magnetostatics2.tcl p3m_simple_noncubic.tcl= p3m_wall.tcl p3m_wall_gpu.tcl rotation.tcl rotation_per_particle.tcl sc_fl= uid_gpu.tcl tabulated.tcl tunable_slip.tcl uwerr.tcl virtual-sites.tcl; \ else \ ./runtest.sh analysis.tcl angle.tcl collision-detection-centers.tcl colli= sion-detection-poc.tcl comforce.tcl comfixed.tcl command_syntax.tcl constra= ints.tcl constraints_reflecting.tcl correlation.tcl constraints_rhomboid.tc= l dh.tcl dielectric.tcl ek_eof_one_species_x.tcl ek_eof_one_species_y.tcl e= k_eof_one_species_z.tcl ek_reaction.tcl el2d.tcl el2d_die.tcl el2d_nonneutr= al.tcl exclusions.tcl external_potential.tcl fene.tcl gb.tcl ghmc.tcl harm.= tcl iccp3m.tcl intpbc.tcl intppbc.tcl kinetic.tcl langevin.tcl layered.tcl = lb.tcl lb_fluid_coupling.tcl lb_fluid_coupling_gpu.tcl lb_gpu.tcl lb_planar= .tcl lb_planar_gpu.tcl lb_planar_embedded_particles.tcl lb_planar_embedded_= particles_gpu.tcl lb_stokes_sphere.tcl lb_stokes_sphere_gpu.tcl lj.tcl lj-c= os.tcl lj-generic.tcl madelung.tcl maggs.tcl magnetic-field.tcl mass.tcl ma= ss-and-rinertia.tcl mdlc.tcl mmm1d.tcl npt.tcl nsquare.tcl nve_pe.tcl objec= t_in_fluid.tcl object_in_fluid_gpu.tcl observable.tcl p3m.tcl p3m_gpu.tcl p= 3m_magnetostatics.tcl p3m_magnetostatics2.tcl p3m_simple_noncubic.tcl p3m_w= all.tcl p3m_wall_gpu.tcl rotation.tcl rotation_per_particle.tcl sc_fluid_gp= u.tcl tabulated.tcl tunable_slip.tcl uwerr.tcl virtual-sites.tcl; \ fi ln -s ../../testsuite/analysis_system.data.00.gz . ln -s ../../testsuite/analysis_system.data.01.gz . ln -s ../../testsuite/analysis_system.data.02.gz . ln -s ../../testsuite/analysis_system.data.03.gz . ln -s ../../testsuite/analysis_system.data.04.gz . ln -s ../../testsuite/analysis_system.data.05.gz . ln -s ../../testsuite/analysis_system.data.06.gz . ln -s ../../testsuite/analysis_system.data.07.gz . ln -s ../../testsuite/analysis_system.data.08.gz . ln -s ../../testsuite/analysis_system.data.09.gz . ln -s ../../testsuite/analysis_system.data.10.gz . ln -s ../../testsuite/analysis.tcl . ln -s ../../testsuite/angle.tcl . ln -s ../../testsuite/collision-detection-centers.tcl . ln -s ../../testsuite/collision-detection-poc.tcl . ln -s ../../testsuite/comfixed_system.data . ln -s ../../testsuite/comfixed.tcl . ln -s ../../testsuite/comforce_system.data . ln -s ../../testsuite/comforce.tcl . ln -s ../../testsuite/command_syntax.tcl . ln -s ../../testsuite/constraints_reflecting.tcl . ln -s ../../testsuite/constraints_rhomboid.tcl . ln -s ../../testsuite/constraints_system.data . ln -s ../../testsuite/constraints.tcl . ln -s ../../testsuite/correlation.tcl . ln -s ../../testsuite/dh_system.data . ln -s ../../testsuite/dh.tcl . ln -s ../../testsuite/dielectric.tcl . ln -s ../../testsuite/ek_eof_one_species_x.tcl . ln -s ../../testsuite/ek_eof_one_species_y.tcl . ln -s ../../testsuite/ek_eof_one_species_z.tcl . ln -s ../../testsuite/ek_reaction.tcl . ln -s ../../testsuite/el2d_die.tcl . ln -s ../../testsuite/el2d_nonneutral.tcl . ln -s ../../testsuite/el2d_system.data . ln -s ../../testsuite/el2d_system_die.data . ln -s ../../testsuite/el2d.tcl . ln -s ../../testsuite/exclusions.tcl . ln -s ../../testsuite/external_potential.tcl . ln -s ../../testsuite/fene_system.data.gz . ln -s ../../testsuite/fene.tcl . ln -s ../../testsuite/gb_system.data . ln -s ../../testsuite/gb.tcl . ln -s ../../testsuite/ghmc.tcl . ln -s ../../testsuite/harm_system.data.gz . ln -s ../../testsuite/harm.tcl . ln -s ../../testsuite/iccp3m.tcl . ln -s ../../testsuite/intpbc_system.data.gz . ln -s ../../testsuite/intpbc.tcl . ln -s ../../testsuite/intppbc_system.data.gz . ln -s ../../testsuite/intppbc.tcl . ln -s ../../testsuite/kinetic.tcl . ln -s ../../testsuite/langevin.tcl . ln -s ../../testsuite/layered.tcl . ln -s ../../testsuite/lb_fluid_coupling_gpu.tcl . ln -s ../../testsuite/lb_fluid_coupling.tcl . ln -s ../../testsuite/lb_gpu.tcl . ln -s ../../testsuite/lb_planar_embedded_particles_gpu.tcl . ln -s ../../testsuite/lb_planar_embedded_particles.tcl . ln -s ../../testsuite/lb_planar_gpu.tcl . ln -s ../../testsuite/lb_planar.tcl . ln -s ../../testsuite/lb_stokes_sphere_gpu.tcl . ln -s ../../testsuite/lb_stokes_sphere.tcl . ln -s ../../testsuite/lb_system.data . ln -s ../../testsuite/lb.tcl . ln -s ../../testsuite/lj1.tab . ln -s ../../testsuite/lj2.tab . ln -s ../../testsuite/lj3.tab . ln -s ../../testsuite/lj-cos_system.data . ln -s ../../testsuite/lj-cos.tcl . ln -s ../../testsuite/lj-generic.tcl . ln -s ../../testsuite/lj_system.data . ln -s ../../testsuite/lj.tcl . ln -s ../../testsuite/madelung.tcl . ln -s ../../testsuite/maggs_correct_rdf.data . ln -s ../../testsuite/maggs.tcl . ln -s ../../testsuite/magnetic-field.tcl . ln -s ../../testsuite/Makefile.am . ln -s ../../testsuite/Makefile.in . ln -s ../../testsuite/mass-and-rinertia.tcl . ln -s ../../testsuite/mass_system.data . ln -s ../../testsuite/mass.tcl . ln -s ../../testsuite/mdlc_expected_energy.data . ln -s ../../testsuite/mdlc_expected_force_torque.data . ln -s ../../testsuite/mdlc_system.data . ln -s ../../testsuite/mdlc.tcl . ln -s ../../testsuite/mmm1d_system.data . ln -s ../../testsuite/mmm1d.tcl . ln -s ../../testsuite/npt_lj_system.data . ln -s ../../testsuite/npt.tcl . ln -s ../../testsuite/nsquare.tcl . ln -s ../../testsuite/nve_pe.tcl . ln -s ../../testsuite/object_in_fluid_gpu.tcl . ln -s ../../testsuite/object_in_fluid_system-final.data . ln -s ../../testsuite/object_in_fluid_system-init.data . ln -s ../../testsuite/object_in_fluid_system-nodes.data . ln -s ../../testsuite/object_in_fluid_system-triangles.data . ln -s ../../testsuite/object_in_fluid.tcl . ln -s ../../testsuite/observable.tcl . ln -s ../../testsuite/p3m_gpu.tcl . ln -s ../../testsuite/p3m_magnetostatics2_expected.data . ln -s ../../testsuite/p3m_magnetostatics2_system.data . ln -s ../../testsuite/p3m_magnetostatics2.tcl . ln -s ../../testsuite/p3m_magnetostatics.data . ln -s ../../testsuite/p3m_magnetostatics.tcl . ln -s ../../testsuite/p3m_simple_noncubic.tcl . ln -s ../../testsuite/p3m_system.data . ln -s ../../testsuite/p3m.tcl . ln -s ../../testsuite/p3m_wall_gpu.tcl . ln -s ../../testsuite/p3m_wall_system.data . ln -s ../../testsuite/p3m_wall.tcl . ln -s ../../testsuite/pe_micelle.data . ln -s ../../testsuite/pe_micelle.tcl . ln -s ../../testsuite/rotation_per_particle.tcl . ln -s ../../testsuite/rotation.tcl . ln -s ../../testsuite/runtest.sh.in . ln -s ../../testsuite/sc_fluid_gpu.tcl . ln -s ../../testsuite/tabulated_system.data . ln -s ../../testsuite/tabulated.tcl . ln -s ../../testsuite/tests_common.tcl . ln -s ../../testsuite/thermostat.data . ln -s ../../testsuite/thermostat_rot.data . ln -s ../../testsuite/tunable_slip.tcl . ln -s ../../testsuite/uwerr.data . ln -s ../../testsuite/uwerr.tcl . ln -s ../../testsuite/virtual-sites.tcl . ** RUNNING TESTSUITE FOR 8 tasks analysis.tcl - ok angle.tcl - ok collision-detection-centers.tcl - ignored collision-detection-poc.tcl - ignored comforce.tcl - ignored comfixed.tcl - ignored command_syntax.tcl - ok constraints.tcl - ok constraints_reflecting.tcl - ok correlation.tcl - ok constraints_rhomboid.tcl - ok dh.tcl - ok dielectric.tcl - ok ek_eof_one_species_x.tcl - ignored ek_eof_one_species_y.tcl - ignored ek_eof_one_species_z.tcl - ignored ek_reaction.tcl - ignored el2d.tcl - ok el2d_die.tcl - ok el2d_nonneutral.tcl - ok exclusions.tcl - ok external_potential.tcl - ERROR (code=3D1) Some test cases failed with 8 tasks, interrupting test suite. ************************************************** ** Not all test cases were successful! ** Have a look at the file testsuite/runtest.log ** for the output of the testcases. ************************************************** ** The testsuite was interrupted! ************************************************** make[3]: *** [check-local] Error 1 make[3]: Leaving directory ` make[2]: *** [check-am] Error 2 make[2]: Leaving directory ` make[1]: *** [check-recursive] Error 1 make[1]: Leaving directory ` make: *** [distcheck] Error 1 + exit 1 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE Archiving artifacts From MAILER-DAEMON Tue May 20 04:13:15 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WmfAh-00056B-TS for mharc-espressomd-maintainer@gnu.org; Tue, 20 May 2014 04:13:15 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:33273) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WmfAa-00054X-C7 for espressomd-maintainer@nongnu.org; Tue, 20 May 2014 04:13:15 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WmfAT-0006vc-J1 for espressomd-maintainer@nongnu.org; Tue, 20 May 2014 04:13:08 -0400 Received: from hydra.rus.uni-stuttgart.de ([129.69.192.3]:59807) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WmfAT-0006vU-Cc for espressomd-maintainer@nongnu.org; Tue, 20 May 2014 04:13:01 -0400 Received: from localhost (localhost [127.0.0.1]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP id 764CA12C67B for ; Tue, 20 May 2014 10:13:00 +0200 (CEST) X-Virus-Scanned: by amavisd-new at hydra.rus.uni-stuttgart.de Received: from hydra.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (hydra.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id ZUJeOONdkAlX for ; Tue, 20 May 2014 10:12:56 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (icp.uni-stuttgart.de [129.69.120.76]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Tue, 20 May 2014 10:12:56 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 3BEE9A40F5 for ; Tue, 20 May 2014 10:12:56 +0200 (CEST) Date: Tue, 20 May 2014 10:12:56 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1657811917.18.1400573576242.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: maxset,3core X-Jenkins-Result: SUCCESS X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.3 Subject: [Espressomd-maintainer] =?utf-8?q?Jenkins_build_is_back_to_stable?= =?utf-8?q?_=3A_master-nightly-multiconfig_=C2=BB_maxset=2C3core_=2391?= X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Tue, 20 May 2014 08:13:15 -0000 See From MAILER-DAEMON Tue May 20 04:13:55 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WmfBL-0005Ak-2A for mharc-espressomd-maintainer@gnu.org; Tue, 20 May 2014 04:13:55 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:33327) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WmfBD-0005AW-JH for espressomd-maintainer@nongnu.org; Tue, 20 May 2014 04:13:54 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WmfB6-00071R-Ki for espressomd-maintainer@nongnu.org; Tue, 20 May 2014 04:13:47 -0400 Received: from hydra.rus.uni-stuttgart.de ([129.69.192.3]:59927) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WmfB6-00071F-EO for espressomd-maintainer@nongnu.org; Tue, 20 May 2014 04:13:40 -0400 Received: from localhost (localhost [127.0.0.1]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP id 0CD3312C4AC for ; Tue, 20 May 2014 10:13:40 +0200 (CEST) X-Virus-Scanned: by amavisd-new at hydra.rus.uni-stuttgart.de Received: from hydra.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (hydra.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id 2_HZNxR1nPVc for ; Tue, 20 May 2014 10:13:35 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (imap.icp.uni-stuttgart.de [129.69.120.76]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Tue, 20 May 2014 10:13:35 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 871CFA40EE for ; Tue, 20 May 2014 10:12:09 +0200 (CEST) Date: Tue, 20 May 2014 10:12:09 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1616142953.16.1400573529550.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: molcut,3core X-Jenkins-Result: SUCCESS X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.3 Subject: [Espressomd-maintainer] =?utf-8?q?Jenkins_build_is_back_to_stable?= =?utf-8?q?_=3A_master-nightly-multiconfig_=C2=BB_molcut=2C3core_=2391?= X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Tue, 20 May 2014 08:13:54 -0000 See From MAILER-DAEMON Tue May 20 05:44:21 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1Wmgaq-0005pJ-W8 for mharc-espressomd-maintainer@gnu.org; Tue, 20 May 2014 05:44:21 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:51469) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wmgai-0005ov-D1 for espressomd-maintainer@nongnu.org; Tue, 20 May 2014 05:44:19 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1Wmgab-0002Td-JD for espressomd-maintainer@nongnu.org; Tue, 20 May 2014 05:44:12 -0400 Received: from hydra.rus.uni-stuttgart.de ([129.69.192.3]:57072) by eggs.gnu.org with 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espressomd-maintainer@nongnu.org Message-ID: <2700961.19.1400579029513.JavaMail.jenkins@elk> In-Reply-To: <539216933.17.1400573550277.JavaMail.jenkins@elk> References: <539216933.17.1400573550277.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-nightly-distcheck X-Jenkins-Result: SUCCESS X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.3 Subject: [Espressomd-maintainer] Jenkins build is back to normal : master-nightly-distcheck #82 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Tue, 20 May 2014 09:44:19 -0000 See From MAILER-DAEMON Tue May 20 05:45:48 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WmgcG-0006Nv-Mh for mharc-espressomd-maintainer@gnu.org; Tue, 20 May 2014 05:45:48 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:51782) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WmgcF-0006MH-0N for espressomd-maintainer@nongnu.org; Tue, 20 May 2014 05:45:47 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WmgcE-0003Hz-7O for espressomd-maintainer@nongnu.org; Tue, 20 May 2014 05:45:46 -0400 Received: from mail-we0-x231.google.com ([2a00:1450:400c:c03::231]:45484) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WmgcE-0003Hp-0R for espressomd-maintainer@nongnu.org; Tue, 20 May 2014 05:45:46 -0400 Received: by mail-we0-f177.google.com with SMTP id x48so227783wes.8 for ; Tue, 20 May 2014 02:45:45 -0700 (PDT) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20120113; h=mime-version:sender:from:date:message-id:subject:to:content-type; bh=nhSB9wDUM64fT/q7G3USYVwQ/8H7p5xJWoi4fJprjcA=; b=gwy3gkBBIo82NfbTB9QTDpVR0JaSgJAVRKB1TqI3FY17dh9kT37ONQEvO0r6/sARzU OVs1Zmw+oqHJNzkQDtgXBdc7v3JhRqObo7ufHPnmvqoLObSUk1T+bXOOxG3UB3f0rOn/ gs66gcMKN+2wHz8EUtDcv4ynQWu47sf3FJwPPOY5au5N4xUOmNzt7M1VDbb3aIKZDUaj c3qhwjV1kOkJVOG9dyfJS8g2NrkSGz/i/QU7eks6OBAdquEDA5MIbKVHJoNq1yyvH/E6 PQRM98j/Kceabml+Iz5DyH/pXteXSyy0bc05QXAbsDkfHHa1jmAAGialFdO8/8W/dWpS teJg== X-Received: by 10.180.228.100 with SMTP id sh4mr3030433wic.40.1400579145140; Tue, 20 May 2014 02:45:45 -0700 (PDT) MIME-Version: 1.0 Sender: olaf.lenz@gmail.com Received: by 10.194.33.233 with HTTP; Tue, 20 May 2014 02:45:24 -0700 (PDT) From: Olaf Lenz Date: Tue, 20 May 2014 11:45:24 +0200 X-Google-Sender-Auth: t3mNYlKdf5zEice9qb4tp0uXwUI Message-ID: To: ESPResSo maintainers Content-Type: multipart/alternative; boundary=001a1135e81a6d262f04f9d1bebf X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2a00:1450:400c:c03::231 Subject: [Espressomd-maintainer] =?utf-8?b?RXMgZ3LDvG50IHNvIGdyw7xuLi4u?= X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Tue, 20 May 2014 09:45:47 -0000 --001a1135e81a6d262f04f9d1bebf Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: quoted-printable Jenkins ist jetzt wieder zufrieden. :-) Olaf --=20 Dr. rer. nat. Olaf Lenz Institut f=C3=BCr Computerphysik, Allmandring 3, D-70569 Stuttgart Phone: +49-711-685-63607 --001a1135e81a6d262f04f9d1bebf Content-Type: text/html; charset=UTF-8 Content-Transfer-Encoding: quoted-printable
Jenkins ist jetzt wieder zufrieden. :-)

Olaf

--
Dr. rer.= nat. Olaf Lenz
Institut f=C3=BCr Computerphysik, Allmandring= 3, D-70569 Stuttgart
Phone: +49-711-685-63607
--001a1135e81a6d262f04f9d1bebf-- From MAILER-DAEMON Sun May 25 14:27:37 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1Wod8z-0001Sn-OG for mharc-espressomd-maintainer@gnu.org; Sun, 25 May 2014 14:27:37 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:52623) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wod8s-0001SV-1O for espressomd-maintainer@nongnu.org; Sun, 25 May 2014 14:27:35 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1Wod8m-0007y3-7P for espressomd-maintainer@nongnu.org; Sun, 25 May 2014 14:27:29 -0400 Received: from charon.rus.uni-stuttgart.de ([129.69.192.1]:41124) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wod8l-0007wP-Tw for espressomd-maintainer@nongnu.org; Sun, 25 May 2014 14:27:24 -0400 Received: from localhost (localhost [127.0.0.1]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP id A9DDA5FE69 for ; Sun, 25 May 2014 20:27:15 +0200 (CEST) X-Virus-Scanned: by amavisd-new at charon.rus.uni-stuttgart.de Received: from charon.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (charon.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id qxlg_9X8avU6 for ; Sun, 25 May 2014 20:27:10 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (icp.uni-stuttgart.de [129.69.120.76]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Sun, 25 May 2014 20:27:10 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 70A44A40EE for ; Sun, 25 May 2014 20:27:10 +0200 (CEST) Date: Sun, 25 May 2014 20:27:10 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1867316234.20.1401042430382.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-build-check X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.1 Subject: [Espressomd-maintainer] Build failed in Jenkins: master-build-check #178 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Sun, 25 May 2014 18:27:36 -0000 See Changes: [Axel Arnold] particle print no longer checks for runtime errors, which cannot occur anyways [Axel Arnold] Removed the dysfunctional invalidate_system, updated checkpointing documentation. [Axel Arnold] Removed invalidate_system voodoo from tests ------------------------------------------ [...truncated 341 lines...] Other settings -------------- config = myconfig.hpp installation prefix = /home/jenkins/Espresso number of test tasks = 8 mympiexec = mpiexec = /usr/lib64/mpi/gcc/openmpi/bin/mpiexec pdflatex = /usr/bin/pdflatex makeindex = /usr/bin/makeindex bibtex = /usr/bin/bibtex doxygen = /usr/bin/doxygen dot = /usr/bin/dot Not building Python interface. END CONFIGURE + maintainer/jenkins/build.sh srcdir= builddir= insource=true START BUILD myconfig=maxset build_procs=1 Copying maxset.hpp to >make -j 1 Making all in config make[1]: Entering directory ` make[1]: Nothing to be done for `all'. make[1]: Leaving directory ` Making all in src make[1]: Entering directory ` GEN myconfig-final.hpp <= ../myconfig.hpp GEN config-features.hpp make all-recursive make[2]: Entering directory ` Making all in . make[3]: Entering directory ` CXX config-features.lo CXX cells.lo CXX collision.lo CXX communication.lo CXX comfixed.lo CXX comforce.lo CXX constraint.lo CXX cuda_interface.lo CXX debug.lo CXX domain_decomposition.lo CXX electrokinetics_pdb_parse.lo CXX energy.lo CXX external_potential.lo external_potential.cpp: In function 'int lattice_read_file(Lattice*, char*)': external_potential.cpp:176:46: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] CXX errorhandling.lo CXX fft.lo CXX fft-common.lo CXX fft-dipolar.lo CXX forcecap.lo CXX forces.lo CXX galilei.lo CXX ghosts.lo CXX global.lo CXX grid.lo CXX halo.lo CXX iccp3m.lo CXX imd.lo CXX initialize.lo CXX integrate.lo CXX interaction_data.lo CXX lattice.lo lattice.cpp: In function 'void _lattice_allocate_memory(Lattice*)': lattice.cpp:101:79: warning: overflow in implicit constant conversion [-Woverflow] lattice.cpp: In function 'void lattice_interpolate_linear_gradient(Lattice*, double*, double*)': lattice.cpp:151:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:156:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:163:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:170:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:177:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:184:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:191:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:198:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:205:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:145:11: warning: unused variable 'w' [-Wunused-variable] lattice.cpp:145:17: warning: unused variable 'wd' [-Wunused-variable] lattice.cpp:146:12: warning: unused variable 'temp_index' [-Wunused-variable] lattice.cpp: In function 'void lattice_interpolate_linear(Lattice*, double*, double*)': lattice.cpp:253:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:260:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:234:12: warning: unused variable 'temp_index' [-Wunused-variable] CXX layered.lo CXX lb.lo CXX lb-boundaries.lo CXX lbgpu.lo CXX metadynamics.lo CXX modes.lo CXX molforces.lo CXX mol_cut.lo CXX nemd.lo CXX nsquare.lo CXX particle_data.lo CXX polymer.lo CXX pressure.lo CXX random.lo CXX rattle.lo CXX reaction.lo CXX rotation.lo CXX specfunc.lo CXX statistics.lo CXX statistics_chain.lo CXX statistics_cluster.lo CXX statistics_correlation.lo CXX statistics_fluid.lo CXX statistics_molecule.lo CXX statistics_observable.lo statistics_observable.cpp: In function 'int observable_calc_radial_density_profile(observable*)': statistics_observable.cpp:631:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_radial_flux_density_profile(observable*)': statistics_observable.cpp:683:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_flux_density_profile(observable*)': statistics_observable.cpp:765:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_particle_positions(observable*)': statistics_observable.cpp:801:16: warning: unused variable 'i' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_calc_particle_forces(observable*)': statistics_observable.cpp:821:16: warning: unused variable 'i' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_reset_average(observable*)': statistics_observable.cpp:885:9: warning: unused variable 'error' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_calculate(observable*)': statistics_observable.cpp:41:10: warning: 'temp' may be used uninitialized in this function [-Wmaybe-uninitialized] statistics_observable.cpp: In function 'int observable_update(observable*)': statistics_observable.cpp:49:10: warning: 'temp' may be used uninitialized in this function [-Wmaybe-uninitialized] CXX statistics_wallstuff.lo CXX thermostat.lo CXX topology.lo CXX tuning.lo CXX uwerr.lo CXX verlet.lo CXX virtual_sites.lo CXX virtual_sites_com.lo CXX virtual_sites_relative.lo CXX vmdsock.lo CXX ghmc.lo CXX EspressoSystemInterface.lo CXX bmhtf-nacl.lo CXX buckingham.lo CXX dpd.lo CXX gaussian.lo CXX gb.lo CXX hat.lo CXX hertzian.lo CXX lj.lo CXX ljangle.lo CXX ljcos.lo CXX ljcos2.lo CXX ljgen.lo CXX morse.lo CXX soft_sphere.lo CXX steppot.lo CXX tab.lo CXX tunable_slip.lo CXX angle.lo CXX angle_harmonic.lo CXX angle_cosine.lo CXX angle_cossquare.lo CXX angledist.lo CXX dihedral.lo CXX endangledist.lo CXX fene.lo CXX harmonic.lo CXX overlap.lo CXX subt_lj.lo CXX object-in-fluid/area_force_local.lo CXX object-in-fluid/area_force_global.lo CXX object-in-fluid/bending_force.lo CXX object-in-fluid/stretching_force.lo CXX object-in-fluid/stretchlin_force.lo CXX object-in-fluid/volume_force.lo CXX debye_hueckel.lo CXX elc.lo CXX magnetic_non_p3m_methods.lo CXX mdlc_correction.lo CXX maggs.lo CXX mmm1d.lo CXX mmm2d.lo CXX mmm-common.lo CXX p3m.lo CXX p3m-common.lo CXX p3m-dipolar.lo CXX reaction_field.lo NVCC cuda_init_cuda.lo NVCC cuda_common_cuda.lo NVCC electrokinetics_cuda.lo NVCC lbgpu_cuda.lo lbgpu_cuda.cu(3531): warning: variable "Rho" was declared but never referenced lbgpu_cuda.cu(3531): warning: variable "Rho" was declared but never referenced NVCC p3m_gpu_cuda.lo NVCC EspressoSystemInterface_cuda.lo NVCC HarmonicForce.lo GEN config-version.cpp CXX config-version.lo CXXLD libEspresso.la make[3]: Leaving directory ` Making all in tcl make[3]: Entering directory ` CXX bin_tcl.lo CXX binary_file_tcl.lo CXX blockfile_tcl.lo CXX cells_tcl.lo CXX channels_tcl.lo CXX collision_tcl.lo CXX comfixed_tcl.lo CXX comforce_tcl.lo CXX config_tcl.lo CXX constraint_tcl.lo CXX domain_decomposition_tcl.lo CXX electrokinetics_tcl.lo CXX external_potential_tcl.lo external_potential_tcl.cpp: In function 'int tclcommand_external_potential_tabulated(Tcl_Interp*, int, char**, ExternalPotential*)': external_potential_tcl.cpp:31:7: warning: unused variable 'type' [-Wunused-variable] external_potential_tcl.cpp:32:10: warning: unused variable 'scale' [-Wunused-variable] CXX energy_tcl.lo CXX galilei_tcl.lo CXX global_tcl.lo CXX grid_tcl.lo CXX iccp3m_tcl.lo iccp3m_tcl.cpp: In function 'int tclcommand_iccp3m_parse_normals(Tcl_Interp*, int, char*)': iccp3m_tcl.cpp:191:9: warning: unused variable 'token' [-Wunused-variable] iccp3m_tcl.cpp:192:7: warning: unused variable 'scan_succes' [-Wunused-variable] iccp3m_tcl.cpp:196:14: warning: unused variable 'opening_bracket' [-Wunused-variable] iccp3m_tcl.cpp:197:14: warning: unused variable 'closing_bracket' [-Wunused-variable] iccp3m_tcl.cpp:198:14: warning: unused variable 'space' [-Wunused-variable] iccp3m_tcl.cpp:200:14: warning: unused variable 'delimiters' [-Wunused-variable] CXX imd_tcl.lo CXX initialize_interpreter.lo initialize_interpreter.cpp:28:25: fatal error: cells_tcl.hpp: No such file or directory compilation terminated. make[3]: *** [initialize_interpreter.lo] Error 1 make[3]: Leaving directory ` make[2]: *** [all-recursive] Error 1 make[2]: Leaving directory ` make[1]: *** [all] Error 2 make[1]: Leaving directory ` make: *** [all-recursive] Error 1 + exit 1 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE Archiving artifacts From MAILER-DAEMON Sun May 25 18:54:23 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WohJ8-0005q2-VZ for mharc-espressomd-maintainer@gnu.org; Sun, 25 May 2014 18:54:22 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:44777) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WohJ0-0005pj-DD for espressomd-maintainer@nongnu.org; Sun, 25 May 2014 18:54:20 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WohIt-0006kM-Ue for espressomd-maintainer@nongnu.org; Sun, 25 May 2014 18:54:14 -0400 Received: from charon-out.rus.uni-stuttgart.de ([2001:7c0:2041:25::1:1]:34809 helo=charon.rus.uni-stuttgart.de) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WohIt-0006kB-Jk for espressomd-maintainer@nongnu.org; Sun, 25 May 2014 18:54:07 -0400 Received: from localhost (localhost [127.0.0.1]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP id BC8F45FE86 for ; Mon, 26 May 2014 00:54:05 +0200 (CEST) X-Virus-Scanned: by amavisd-new at charon.rus.uni-stuttgart.de Received: from charon.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (charon.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id stNkpfpbQTG5 for ; Mon, 26 May 2014 00:54:00 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (mailrelay.icp.uni-stuttgart.de [129.69.120.76]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Mon, 26 May 2014 00:54:00 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id DAADEA40EE for ; Mon, 26 May 2014 00:54:00 +0200 (CEST) Date: Mon, 26 May 2014 00:54:00 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1227700939.21.1401058440797.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-nightly-distcheck X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2001:7c0:2041:25::1:1 Subject: [Espressomd-maintainer] Build failed in Jenkins: master-nightly-distcheck #85 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Sun, 25 May 2014 22:54:20 -0000 See Changes: [Axel Arnold] particle print no longer checks for runtime errors, which cannot occur anyways [Axel Arnold] Removed the dysfunctional invalidate_system, updated checkpointing documentation. [Axel Arnold] Removed invalidate_system voodoo from tests ------------------------------------------ [...truncated 883 lines...] Cuda ---- CUDA compiler = /usr/local/cuda/bin/nvcc CUDA flags = --ptxas-options=-v -gencode arch=compute_20,code=compute_20 Tcl/Tk ------ Tcl version = tcl8.5 Tk version = none Python ------ python = /usr/local/bin/python -B build python interface = no Other settings -------------- config = myconfig.hpp installation prefix = number of test tasks = 8 mympiexec = mpiexec = /usr/lib64/mpi/gcc/openmpi/bin/mpiexec pdflatex = /usr/bin/pdflatex makeindex = /usr/bin/makeindex bibtex = /usr/bin/bibtex doxygen = /usr/bin/doxygen dot = /usr/bin/dot Not building Python interface. make[1]: Entering directory ` Making all in config make[2]: Entering directory ` make[2]: Nothing to be done for `all'. make[2]: Leaving directory ` Making all in src make[2]: Entering directory ` GEN myconfig-final.hpp <= ../../src/myconfig-default.hpp make all-recursive make[3]: Entering directory ` Making all in . make[4]: Entering directory ` CXX config-features.lo CXX cells.lo CXX collision.lo CXX communication.lo CXX comfixed.lo CXX comforce.lo CXX constraint.lo CXX cuda_interface.lo CXX debug.lo CXX domain_decomposition.lo CXX electrokinetics_pdb_parse.lo CXX energy.lo CXX external_potential.lo ../../src/external_potential.cpp: In function 'int lattice_read_file(Lattice*, char*)': ../../src/external_potential.cpp:176:46: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] CXX errorhandling.lo CXX fft.lo CXX fft-common.lo CXX fft-dipolar.lo CXX forcecap.lo CXX forces.lo CXX galilei.lo CXX ghosts.lo CXX global.lo CXX grid.lo CXX halo.lo CXX iccp3m.lo CXX imd.lo CXX initialize.lo CXX integrate.lo CXX interaction_data.lo CXX lattice.lo ../../src/lattice.cpp: In function 'void _lattice_allocate_memory(Lattice*)': ../../src/lattice.cpp:101:79: warning: overflow in implicit constant conversion [-Woverflow] ../../src/lattice.cpp: In function 'void lattice_interpolate_linear_gradient(Lattice*, double*, double*)': ../../src/lattice.cpp:151:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/lattice.cpp:156:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/lattice.cpp:163:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/lattice.cpp:170:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/lattice.cpp:177:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/lattice.cpp:184:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/lattice.cpp:191:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/lattice.cpp:198:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/lattice.cpp:205:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/lattice.cpp:145:11: warning: unused variable 'w' [-Wunused-variable] ../../src/lattice.cpp:145:17: warning: unused variable 'wd' [-Wunused-variable] ../../src/lattice.cpp:146:12: warning: unused variable 'temp_index' [-Wunused-variable] ../../src/lattice.cpp: In function 'void lattice_interpolate_linear(Lattice*, double*, double*)': ../../src/lattice.cpp:253:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/lattice.cpp:260:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/lattice.cpp:234:12: warning: unused variable 'temp_index' [-Wunused-variable] CXX layered.lo CXX lb.lo CXX lb-boundaries.lo CXX lbgpu.lo CXX metadynamics.lo CXX modes.lo CXX molforces.lo CXX mol_cut.lo CXX nemd.lo CXX nsquare.lo CXX particle_data.lo CXX polymer.lo CXX pressure.lo CXX random.lo CXX rattle.lo CXX reaction.lo CXX rotation.lo CXX specfunc.lo CXX statistics.lo CXX statistics_chain.lo CXX statistics_cluster.lo CXX statistics_correlation.lo CXX statistics_fluid.lo CXX statistics_molecule.lo CXX statistics_observable.lo ../../src/statistics_observable.cpp: In function 'int observable_calc_radial_density_profile(observable*)': ../../src/statistics_observable.cpp:631:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/statistics_observable.cpp: In function 'int observable_calc_radial_flux_density_profile(observable*)': ../../src/statistics_observable.cpp:683:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/statistics_observable.cpp: In function 'int observable_calc_flux_density_profile(observable*)': ../../src/statistics_observable.cpp:765:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/statistics_observable.cpp: In function 'int observable_calc_particle_positions(observable*)': ../../src/statistics_observable.cpp:801:16: warning: unused variable 'i' [-Wunused-variable] ../../src/statistics_observable.cpp: In function 'int observable_calc_particle_forces(observable*)': ../../src/statistics_observable.cpp:821:16: warning: unused variable 'i' [-Wunused-variable] ../../src/statistics_observable.cpp: In function 'int observable_reset_average(observable*)': ../../src/statistics_observable.cpp:885:9: warning: unused variable 'error' [-Wunused-variable] ../../src/statistics_observable.cpp: In function 'int observable_calculate(observable*)': ../../src/statistics_observable.cpp:41:10: warning: 'temp' may be used uninitialized in this function [-Wmaybe-uninitialized] ../../src/statistics_observable.cpp: In function 'int observable_update(observable*)': ../../src/statistics_observable.cpp:49:10: warning: 'temp' may be used uninitialized in this function [-Wmaybe-uninitialized] CXX statistics_wallstuff.lo CXX thermostat.lo CXX topology.lo CXX tuning.lo CXX uwerr.lo CXX verlet.lo CXX virtual_sites.lo CXX virtual_sites_com.lo CXX virtual_sites_relative.lo CXX vmdsock.lo CXX ghmc.lo CXX EspressoSystemInterface.lo CXX bmhtf-nacl.lo CXX buckingham.lo CXX dpd.lo CXX gaussian.lo CXX gb.lo CXX hat.lo CXX hertzian.lo CXX lj.lo CXX ljangle.lo CXX ljcos.lo CXX ljcos2.lo CXX ljgen.lo CXX morse.lo CXX soft_sphere.lo CXX steppot.lo CXX tab.lo CXX tunable_slip.lo CXX angle.lo CXX angle_harmonic.lo CXX angle_cosine.lo CXX angle_cossquare.lo CXX angledist.lo CXX dihedral.lo CXX endangledist.lo CXX fene.lo CXX harmonic.lo CXX overlap.lo CXX subt_lj.lo CXX object-in-fluid/area_force_local.lo CXX object-in-fluid/area_force_global.lo CXX object-in-fluid/bending_force.lo CXX object-in-fluid/stretching_force.lo CXX object-in-fluid/stretchlin_force.lo CXX object-in-fluid/volume_force.lo CXX debye_hueckel.lo CXX elc.lo CXX magnetic_non_p3m_methods.lo CXX mdlc_correction.lo CXX maggs.lo CXX mmm1d.lo CXX mmm2d.lo CXX mmm-common.lo CXX p3m.lo CXX p3m-common.lo CXX p3m-dipolar.lo CXX reaction_field.lo NVCC cuda_init_cuda.lo NVCC cuda_common_cuda.lo NVCC electrokinetics_cuda.lo NVCC lbgpu_cuda.lo NVCC p3m_gpu_cuda.lo NVCC EspressoSystemInterface_cuda.lo NVCC HarmonicForce.lo GEN config-version.cpp CXX config-version.lo CXXLD libEspresso.la make[4]: Leaving directory ` Making all in tcl make[4]: Entering directory ` CXX bin_tcl.lo CXX binary_file_tcl.lo CXX blockfile_tcl.lo CXX cells_tcl.lo CXX channels_tcl.lo CXX collision_tcl.lo CXX comfixed_tcl.lo CXX comforce_tcl.lo CXX config_tcl.lo CXX constraint_tcl.lo CXX domain_decomposition_tcl.lo CXX electrokinetics_tcl.lo CXX external_potential_tcl.lo ../../../src/tcl/external_potential_tcl.cpp: In function 'int tclcommand_external_potential_tabulated(Tcl_Interp*, int, char**, ExternalPotential*)': ../../../src/tcl/external_potential_tcl.cpp:31:7: warning: unused variable 'type' [-Wunused-variable] ../../../src/tcl/external_potential_tcl.cpp:32:10: warning: unused variable 'scale' [-Wunused-variable] CXX energy_tcl.lo CXX galilei_tcl.lo CXX global_tcl.lo CXX grid_tcl.lo CXX iccp3m_tcl.lo ../../../src/tcl/iccp3m_tcl.cpp: In function 'int tclcommand_iccp3m_parse_normals(Tcl_Interp*, int, char*)': ../../../src/tcl/iccp3m_tcl.cpp:191:9: warning: unused variable 'token' [-Wunused-variable] ../../../src/tcl/iccp3m_tcl.cpp:192:7: warning: unused variable 'scan_succes' [-Wunused-variable] ../../../src/tcl/iccp3m_tcl.cpp:196:14: warning: unused variable 'opening_bracket' [-Wunused-variable] ../../../src/tcl/iccp3m_tcl.cpp:197:14: warning: unused variable 'closing_bracket' [-Wunused-variable] ../../../src/tcl/iccp3m_tcl.cpp:198:14: warning: unused variable 'space' [-Wunused-variable] ../../../src/tcl/iccp3m_tcl.cpp:200:14: warning: unused variable 'delimiters' [-Wunused-variable] CXX imd_tcl.lo CXX initialize_interpreter.lo ../../../src/tcl/initialize_interpreter.cpp:28:25: fatal error: cells_tcl.hpp: No such file or directory compilation terminated. make[4]: *** [initialize_interpreter.lo] Error 1 make[4]: Leaving directory ` make[3]: *** [all-recursive] Error 1 make[3]: Leaving directory ` make[2]: *** [all] Error 2 make[2]: Leaving directory ` make[1]: *** [all-recursive] Error 1 make[1]: Leaving directory ` make: *** [distcheck] Error 1 + exit 1 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE Archiving artifacts From MAILER-DAEMON Sun May 25 20:01:02 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WoiLe-0004Hr-Hm for mharc-espressomd-maintainer@gnu.org; Sun, 25 May 2014 20:01:02 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:51258) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WoiLW-0004HT-4R for espressomd-maintainer@nongnu.org; Sun, 25 May 2014 20:01:00 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WoiLP-0007Ip-R1 for espressomd-maintainer@nongnu.org; Sun, 25 May 2014 20:00:54 -0400 Received: from hydra.rus.uni-stuttgart.de ([129.69.192.3]:37197) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WoiLP-0007Ih-Gv for espressomd-maintainer@nongnu.org; Sun, 25 May 2014 20:00:47 -0400 Received: from localhost (localhost [127.0.0.1]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP id DCF9112C901 for ; Mon, 26 May 2014 02:00:43 +0200 (CEST) X-Virus-Scanned: by amavisd-new at hydra.rus.uni-stuttgart.de Received: from hydra.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (hydra.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id I9K-PVe4hN6R for ; Mon, 26 May 2014 02:00:39 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (ica1.uni-stuttgart.de [129.69.120.76]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Mon, 26 May 2014 02:00:38 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id E4148A40EE for ; Mon, 26 May 2014 02:00:38 +0200 (CEST) Date: Mon, 26 May 2014 02:00:38 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1240704795.22.1401062438834.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-nightly-nocuda-nofftw X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.3 Subject: [Espressomd-maintainer] Build failed in Jenkins: master-nightly-nocuda-nofftw #81 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Mon, 26 May 2014 00:01:00 -0000 See Changes: [Axel Arnold] particle print no longer checks for runtime errors, which cannot occur anyways [Axel Arnold] Removed the dysfunctional invalidate_system, updated checkpointing documentation. [Axel Arnold] Removed invalidate_system voodoo from tests ------------------------------------------ [...truncated 296 lines...] Tcl version = tcl8.5 Tk version = none Python ------ python = /usr/local/bin/python -B build python interface = no Other settings -------------- config = myconfig.hpp installation prefix = /home/jenkins/Espresso number of test tasks = 8 mympiexec = mpiexec = /usr/lib64/mpi/gcc/openmpi/bin/mpiexec pdflatex = /usr/bin/pdflatex makeindex = /usr/bin/makeindex bibtex = /usr/bin/bibtex doxygen = /usr/bin/doxygen dot = /usr/bin/dot CUDA disabled or not supported. Not building Python interface. END CONFIGURE + maintainer/jenkins/build.sh 23143 (process ID) old priority 0, new priority 5 srcdir= builddir= insource=true START BUILD myconfig=maxset build_procs=4 Copying maxset.hpp to >make -j 4 Making all in config make[1]: Entering directory ` make[1]: Nothing to be done for `all'. make[1]: Leaving directory ` Making all in src make[1]: Entering directory ` GEN config-features.hpp GEN myconfig-final.hpp <= ../myconfig.hpp GEN config-features.cpp make all-recursive make[2]: Entering directory ` Making all in . make[3]: Entering directory ` CXX cells.lo CXX config-features.lo CXX collision.lo CXX communication.lo CXX comfixed.lo CXX comforce.lo CXX constraint.lo CXX cuda_interface.lo CXX debug.lo CXX domain_decomposition.lo CXX electrokinetics_pdb_parse.lo CXX energy.lo CXX external_potential.lo CXX errorhandling.lo CXX fft.lo CXX fft-common.lo CXX fft-dipolar.lo external_potential.cpp: In function 'int lattice_read_file(Lattice*, char*)': external_potential.cpp:176:46: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] CXX forcecap.lo CXX forces.lo CXX galilei.lo CXX ghosts.lo CXX global.lo CXX grid.lo CXX halo.lo CXX iccp3m.lo CXX imd.lo CXX initialize.lo CXX integrate.lo CXX interaction_data.lo CXX lattice.lo CXX layered.lo lattice.cpp: In function 'void _lattice_allocate_memory(Lattice*)': lattice.cpp:101:79: warning: overflow in implicit constant conversion [-Woverflow] lattice.cpp: In function 'void lattice_interpolate_linear_gradient(Lattice*, double*, double*)': lattice.cpp:151:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:156:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:163:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:170:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:177:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:184:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:191:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:198:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:205:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:145:11: warning: unused variable 'w' [-Wunused-variable] lattice.cpp:145:17: warning: unused variable 'wd' [-Wunused-variable] lattice.cpp:146:12: warning: unused variable 'temp_index' [-Wunused-variable] lattice.cpp: In function 'void lattice_interpolate_linear(Lattice*, double*, double*)': lattice.cpp:253:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:260:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:234:12: warning: unused variable 'temp_index' [-Wunused-variable] CXX lb.lo CXX lb-boundaries.lo CXX lbgpu.lo CXX metadynamics.lo CXX modes.lo CXX molforces.lo CXX mol_cut.lo CXX nemd.lo CXX nsquare.lo CXX particle_data.lo CXX polymer.lo CXX pressure.lo CXX random.lo CXX rattle.lo CXX reaction.lo CXX rotation.lo CXX specfunc.lo CXX statistics.lo CXX statistics_chain.lo CXX statistics_cluster.lo CXX statistics_correlation.lo CXX statistics_fluid.lo CXX statistics_molecule.lo CXX statistics_observable.lo CXX statistics_wallstuff.lo statistics_observable.cpp: In function 'int observable_calc_radial_density_profile(observable*)': statistics_observable.cpp:631:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_radial_flux_density_profile(observable*)': statistics_observable.cpp:683:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_flux_density_profile(observable*)': statistics_observable.cpp:765:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_particle_positions(observable*)': statistics_observable.cpp:801:16: warning: unused variable 'i' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_calc_particle_forces(observable*)': statistics_observable.cpp:821:16: warning: unused variable 'i' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_reset_average(observable*)': statistics_observable.cpp:885:9: warning: unused variable 'error' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_calculate(observable*)': statistics_observable.cpp:41:10: warning: 'temp' may be used uninitialized in this function [-Wmaybe-uninitialized] statistics_observable.cpp: In function 'int observable_update(observable*)': statistics_observable.cpp:49:10: warning: 'temp' may be used uninitialized in this function [-Wmaybe-uninitialized] CXX thermostat.lo CXX topology.lo CXX tuning.lo CXX uwerr.lo CXX verlet.lo CXX virtual_sites.lo CXX virtual_sites_com.lo CXX virtual_sites_relative.lo CXX vmdsock.lo CXX ghmc.lo CXX EspressoSystemInterface.lo CXX bmhtf-nacl.lo CXX buckingham.lo CXX dpd.lo CXX gaussian.lo CXX gb.lo CXX hat.lo CXX hertzian.lo CXX lj.lo CXX ljangle.lo CXX ljcos.lo CXX ljcos2.lo CXX ljgen.lo CXX morse.lo CXX soft_sphere.lo CXX steppot.lo CXX tab.lo CXX tunable_slip.lo CXX angle.lo CXX angle_harmonic.lo CXX angle_cosine.lo CXX angle_cossquare.lo CXX angledist.lo CXX dihedral.lo CXX endangledist.lo CXX fene.lo CXX harmonic.lo CXX overlap.lo CXX subt_lj.lo CXX debye_hueckel.lo CXX elc.lo CXX magnetic_non_p3m_methods.lo CXX mdlc_correction.lo CXX maggs.lo CXX mmm1d.lo CXX mmm2d.lo CXX mmm-common.lo CXX p3m.lo CXX p3m-common.lo CXX p3m-dipolar.lo CXX reaction_field.lo GEN config-version.cpp CXX object-in-fluid/area_force_local.lo CXX object-in-fluid/area_force_global.lo CXX object-in-fluid/bending_force.lo CXX object-in-fluid/stretching_force.lo CXX object-in-fluid/stretchlin_force.lo CXX object-in-fluid/volume_force.lo CXX config-version.lo CXXLD libEspresso.la make[3]: Leaving directory ` Making all in tcl make[3]: Entering directory ` CXX bin_tcl.lo CXX binary_file_tcl.lo CXX blockfile_tcl.lo CXX cells_tcl.lo CXX channels_tcl.lo CXX collision_tcl.lo CXX comfixed_tcl.lo CXX comforce_tcl.lo CXX config_tcl.lo CXX constraint_tcl.lo CXX domain_decomposition_tcl.lo CXX electrokinetics_tcl.lo CXX external_potential_tcl.lo CXX energy_tcl.lo external_potential_tcl.cpp: In function 'int tclcommand_external_potential_tabulated(Tcl_Interp*, int, char**, ExternalPotential*)': external_potential_tcl.cpp:31:7: warning: unused variable 'type' [-Wunused-variable] external_potential_tcl.cpp:32:10: warning: unused variable 'scale' [-Wunused-variable] CXX galilei_tcl.lo CXX global_tcl.lo CXX grid_tcl.lo CXX iccp3m_tcl.lo CXX imd_tcl.lo CXX initialize_interpreter.lo initialize_interpreter.cpp:28:25: fatal error: cells_tcl.hpp: No such file or directory compilation terminated. make[3]: *** [initialize_interpreter.lo] Error 1 make[3]: *** Waiting for unfinished jobs.... iccp3m_tcl.cpp: In function 'int tclcommand_iccp3m_parse_normals(Tcl_Interp*, int, char*)': iccp3m_tcl.cpp:191:9: warning: unused variable 'token' [-Wunused-variable] iccp3m_tcl.cpp:192:7: warning: unused variable 'scan_succes' [-Wunused-variable] iccp3m_tcl.cpp:196:14: warning: unused variable 'opening_bracket' [-Wunused-variable] iccp3m_tcl.cpp:197:14: warning: unused variable 'closing_bracket' [-Wunused-variable] iccp3m_tcl.cpp:198:14: warning: unused variable 'space' [-Wunused-variable] iccp3m_tcl.cpp:200:14: warning: unused variable 'delimiters' [-Wunused-variable] make[3]: Leaving directory ` make[2]: *** [all-recursive] Error 1 make[2]: Leaving directory ` make[1]: *** [all] Error 2 make[1]: Leaving directory ` make: *** [all-recursive] Error 1 + exit 1 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE Archiving artifacts From MAILER-DAEMON Sun May 25 21:39:49 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WojtF-0001zm-2g for mharc-espressomd-maintainer@gnu.org; Sun, 25 May 2014 21:39:49 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:34326) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wojt8-0001p1-BL for espressomd-maintainer@nongnu.org; Sun, 25 May 2014 21:39:48 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1Wojt2-0007yR-GB for espressomd-maintainer@nongnu.org; Sun, 25 May 2014 21:39:42 -0400 Received: from charon.rus.uni-stuttgart.de ([129.69.192.1]:55963) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wojt2-0007yK-5h for espressomd-maintainer@nongnu.org; Sun, 25 May 2014 21:39:36 -0400 Received: from localhost (localhost [127.0.0.1]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP id F0D8E5FE37 for ; Mon, 26 May 2014 03:39:32 +0200 (CEST) X-Virus-Scanned: by amavisd-new at charon.rus.uni-stuttgart.de Received: from charon.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (charon.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id 0REJMEpH2Q4z for ; Mon, 26 May 2014 03:39:28 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (ica1.uni-stuttgart.de [129.69.120.76]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Mon, 26 May 2014 03:39:27 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id D9E02A40EE for ; Mon, 26 May 2014 03:39:27 +0200 (CEST) Date: Mon, 26 May 2014 03:39:27 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1923192109.23.1401068367811.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-nightly-mpich X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.1 Subject: [Espressomd-maintainer] Build failed in Jenkins: master-nightly-mpich #79 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Mon, 26 May 2014 01:39:48 -0000 See Changes: [Axel Arnold] particle print no longer checks for runtime errors, which cannot occur anyways [Axel Arnold] Removed the dysfunctional invalidate_system, updated checkpointing documentation. [Axel Arnold] Removed invalidate_system voodoo from tests ------------------------------------------ [...truncated 317 lines...] installation prefix = /home/jenkins/Espresso number of test tasks = 8 mympiexec = mpiexec = /home/jenkins/mpich/bin/mpiexec pdflatex = /usr/bin/pdflatex makeindex = /usr/bin/makeindex bibtex = /usr/bin/bibtex doxygen = /usr/bin/doxygen dot = /usr/bin/dot Not building Python interface. END CONFIGURE + maintainer/jenkins/build.sh 2646 (process ID) old priority 0, new priority 5 srcdir= builddir= insource=true START BUILD myconfig=maxset build_procs=4 Copying maxset.hpp to >make -j 4 Making all in config make[1]: Entering directory ` make[1]: Nothing to be done for `all'. make[1]: Leaving directory ` Making all in src make[1]: Entering directory ` GEN myconfig-final.hpp <= ../myconfig.hpp GEN config-features.hpp GEN config-features.cpp make all-recursive make[2]: Entering directory ` Making all in . make[3]: Entering directory ` CXX config-features.lo CXX cells.lo CXX collision.lo CXX communication.lo CXX comfixed.lo CXX comforce.lo CXX constraint.lo CXX cuda_interface.lo CXX debug.lo CXX domain_decomposition.lo CXX electrokinetics_pdb_parse.lo CXX energy.lo CXX external_potential.lo CXX errorhandling.lo external_potential.cpp: In function 'int lattice_read_file(Lattice*, char*)': external_potential.cpp:176:46: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] CXX fft.lo CXX fft-common.lo CXX fft-dipolar.lo CXX forcecap.lo CXX forces.lo CXX galilei.lo CXX ghosts.lo CXX global.lo CXX grid.lo CXX halo.lo CXX iccp3m.lo CXX imd.lo CXX initialize.lo CXX integrate.lo CXX interaction_data.lo CXX lattice.lo CXX layered.lo lattice.cpp: In function 'void _lattice_allocate_memory(Lattice*)': lattice.cpp:101:79: warning: overflow in implicit constant conversion [-Woverflow] lattice.cpp: In function 'void lattice_interpolate_linear_gradient(Lattice*, double*, double*)': lattice.cpp:151:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:156:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:163:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:170:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:177:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:184:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:191:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:198:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:205:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:145:11: warning: unused variable 'w' [-Wunused-variable] lattice.cpp:145:17: warning: unused variable 'wd' [-Wunused-variable] lattice.cpp:146:12: warning: unused variable 'temp_index' [-Wunused-variable] lattice.cpp: In function 'void lattice_interpolate_linear(Lattice*, double*, double*)': lattice.cpp:253:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:260:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:234:12: warning: unused variable 'temp_index' [-Wunused-variable] CXX lb.lo CXX lb-boundaries.lo CXX lbgpu.lo CXX metadynamics.lo CXX modes.lo CXX molforces.lo CXX mol_cut.lo CXX nemd.lo CXX nsquare.lo CXX particle_data.lo CXX polymer.lo CXX pressure.lo CXX random.lo CXX rattle.lo CXX reaction.lo CXX rotation.lo CXX specfunc.lo CXX statistics.lo CXX statistics_chain.lo CXX statistics_cluster.lo CXX statistics_correlation.lo CXX statistics_fluid.lo CXX statistics_molecule.lo CXX statistics_observable.lo CXX statistics_wallstuff.lo CXX thermostat.lo CXX topology.lo statistics_observable.cpp: In function 'int observable_calc_radial_density_profile(observable*)': statistics_observable.cpp:631:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_radial_flux_density_profile(observable*)': statistics_observable.cpp:683:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_flux_density_profile(observable*)': statistics_observable.cpp:765:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_particle_positions(observable*)': statistics_observable.cpp:801:16: warning: unused variable 'i' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_calc_particle_forces(observable*)': statistics_observable.cpp:821:16: warning: unused variable 'i' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_reset_average(observable*)': statistics_observable.cpp:885:9: warning: unused variable 'error' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_calculate(observable*)': statistics_observable.cpp:41:10: warning: 'temp' may be used uninitialized in this function [-Wmaybe-uninitialized] statistics_observable.cpp: In function 'int observable_update(observable*)': statistics_observable.cpp:49:10: warning: 'temp' may be used uninitialized in this function [-Wmaybe-uninitialized] CXX tuning.lo CXX uwerr.lo CXX verlet.lo CXX virtual_sites.lo CXX virtual_sites_com.lo CXX virtual_sites_relative.lo CXX vmdsock.lo CXX ghmc.lo CXX EspressoSystemInterface.lo CXX bmhtf-nacl.lo CXX buckingham.lo CXX dpd.lo CXX gaussian.lo CXX gb.lo CXX hat.lo CXX hertzian.lo CXX lj.lo CXX ljangle.lo CXX ljcos.lo CXX ljcos2.lo CXX ljgen.lo CXX morse.lo CXX soft_sphere.lo CXX steppot.lo CXX tab.lo CXX tunable_slip.lo CXX angle.lo CXX angle_harmonic.lo CXX angle_cosine.lo CXX angle_cossquare.lo CXX angledist.lo CXX dihedral.lo CXX endangledist.lo CXX fene.lo CXX harmonic.lo CXX overlap.lo CXX subt_lj.lo CXX debye_hueckel.lo CXX elc.lo CXX magnetic_non_p3m_methods.lo CXX mdlc_correction.lo CXX maggs.lo CXX mmm1d.lo CXX mmm2d.lo CXX mmm-common.lo CXX p3m.lo CXX p3m-common.lo CXX p3m-dipolar.lo CXX reaction_field.lo NVCC cuda_init_cuda.lo NVCC cuda_common_cuda.lo NVCC electrokinetics_cuda.lo NVCC lbgpu_cuda.lo lbgpu_cuda.cu(3531): warning: variable "Rho" was declared but never referenced NVCC p3m_gpu_cuda.lo NVCC EspressoSystemInterface_cuda.lo lbgpu_cuda.cu(3531): warning: variable "Rho" was declared but never referenced NVCC HarmonicForce.lo GEN config-version.cpp CXX object-in-fluid/area_force_local.lo CXX object-in-fluid/area_force_global.lo CXX object-in-fluid/bending_force.lo CXX object-in-fluid/stretching_force.lo CXX object-in-fluid/stretchlin_force.lo CXX object-in-fluid/volume_force.lo CXX config-version.lo CXXLD libEspresso.la make[3]: Leaving directory ` Making all in tcl make[3]: Entering directory ` CXX bin_tcl.lo CXX binary_file_tcl.lo CXX blockfile_tcl.lo CXX cells_tcl.lo CXX channels_tcl.lo CXX collision_tcl.lo CXX comfixed_tcl.lo CXX comforce_tcl.lo CXX config_tcl.lo CXX constraint_tcl.lo CXX domain_decomposition_tcl.lo CXX electrokinetics_tcl.lo CXX external_potential_tcl.lo CXX energy_tcl.lo external_potential_tcl.cpp: In function 'int tclcommand_external_potential_tabulated(Tcl_Interp*, int, char**, ExternalPotential*)': external_potential_tcl.cpp:31:7: warning: unused variable 'type' [-Wunused-variable] external_potential_tcl.cpp:32:10: warning: unused variable 'scale' [-Wunused-variable] CXX galilei_tcl.lo CXX global_tcl.lo CXX grid_tcl.lo CXX iccp3m_tcl.lo CXX imd_tcl.lo CXX initialize_interpreter.lo CXX integrate_tcl.lo iccp3m_tcl.cpp: In function 'int tclcommand_iccp3m_parse_normals(Tcl_Interp*, int, char*)': iccp3m_tcl.cpp:191:9: warning: unused variable 'token' [-Wunused-variable] iccp3m_tcl.cpp:192:7: warning: unused variable 'scan_succes' [-Wunused-variable] iccp3m_tcl.cpp:196:14: warning: unused variable 'opening_bracket' [-Wunused-variable] iccp3m_tcl.cpp:197:14: warning: unused variable 'closing_bracket' [-Wunused-variable] iccp3m_tcl.cpp:198:14: warning: unused variable 'space' [-Wunused-variable] iccp3m_tcl.cpp:200:14: warning: unused variable 'delimiters' [-Wunused-variable] initialize_interpreter.cpp:28:25: fatal error: cells_tcl.hpp: No such file or directory compilation terminated. make[3]: *** [initialize_interpreter.lo] Error 1 make[3]: *** Waiting for unfinished jobs.... make[3]: Leaving directory ` make[2]: *** [all-recursive] Error 1 make[2]: Leaving directory ` make[1]: *** [all] Error 2 make[1]: Leaving directory ` make: *** [all-recursive] Error 1 + exit 1 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE Archiving artifacts From MAILER-DAEMON Sun May 25 22:07:21 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WokJt-00046j-H9 for mharc-espressomd-maintainer@gnu.org; Sun, 25 May 2014 22:07:21 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:37075) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WokJm-00046a-Lr for espressomd-maintainer@nongnu.org; Sun, 25 May 2014 22:07:20 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WokJg-0007Ni-O9 for espressomd-maintainer@nongnu.org; Sun, 25 May 2014 22:07:14 -0400 Received: from hydra.rus.uni-stuttgart.de ([129.69.192.3]:41268) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WokJg-0007NH-EO for espressomd-maintainer@nongnu.org; Sun, 25 May 2014 22:07:08 -0400 Received: from localhost (localhost [127.0.0.1]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP id 1376D12CA1E for ; Mon, 26 May 2014 04:07:07 +0200 (CEST) X-Virus-Scanned: by amavisd-new at hydra.rus.uni-stuttgart.de Received: from hydra.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (hydra.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id I2hymVHhjl0W for ; Mon, 26 May 2014 04:07:02 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (icp.uni-stuttgart.de [129.69.120.76]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Mon, 26 May 2014 04:07:02 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 1585BA40EE for ; Mon, 26 May 2014 04:07:02 +0200 (CEST) Date: Mon, 26 May 2014 04:07:02 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <706151379.24.1401070022067.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-nightly-debug X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.3 Subject: [Espressomd-maintainer] Build failed in Jenkins: master-nightly-debug #76 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Mon, 26 May 2014 02:07:20 -0000 See Changes: [Axel Arnold] particle print no longer checks for runtime errors, which cannot occur anyways [Axel Arnold] Removed the dysfunctional invalidate_system, updated checkpointing documentation. [Axel Arnold] Removed invalidate_system voodoo from tests ------------------------------------------ [...truncated 325 lines...] dot = /usr/bin/dot Not building Python interface. END CONFIGURE + maintainer/jenkins/build.sh 17264 (process ID) old priority 0, new priority 5 srcdir= builddir= insource=true START BUILD myconfig=nocheck-maxset build_procs=4 Copying nocheck-maxset.hpp to >make -j 4 Making all in config make[1]: Entering directory ` make[1]: Nothing to be done for `all'. make[1]: Leaving directory ` Making all in src make[1]: Entering directory ` GEN myconfig-final.hpp <= ../myconfig.hpp GEN config-features.hpp GEN config-features.cpp make all-recursive make[2]: Entering directory ` Making all in . make[3]: Entering directory ` CXX config-features.lo CXX cells.lo CXX collision.lo CXX communication.lo CXX comfixed.lo CXX comforce.lo CXX constraint.lo CXX cuda_interface.lo CXX debug.lo CXX domain_decomposition.lo CXX electrokinetics_pdb_parse.lo CXX energy.lo CXX external_potential.lo CXX errorhandling.lo CXX fft.lo CXX fft-common.lo external_potential.cpp: In function 'int lattice_read_file(Lattice*, char*)': external_potential.cpp:176:46: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] CXX fft-dipolar.lo CXX forcecap.lo CXX forces.lo CXX galilei.lo CXX ghosts.lo CXX global.lo CXX grid.lo CXX halo.lo CXX iccp3m.lo CXX imd.lo CXX initialize.lo CXX integrate.lo CXX interaction_data.lo CXX lattice.lo lattice.cpp: In function 'void _lattice_allocate_memory(Lattice*)': lattice.cpp:101:79: warning: overflow in implicit constant conversion [-Woverflow] lattice.cpp: In function 'void lattice_interpolate_linear_gradient(Lattice*, double*, double*)': lattice.cpp:151:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:156:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:163:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:170:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:177:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:184:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:191:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:198:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:205:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:145:11: warning: unused variable 'w' [-Wunused-variable] lattice.cpp:145:17: warning: unused variable 'wd' [-Wunused-variable] lattice.cpp:146:12: warning: unused variable 'temp_index' [-Wunused-variable] lattice.cpp: In function 'void lattice_interpolate_linear(Lattice*, double*, double*)': lattice.cpp:253:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:260:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:234:12: warning: unused variable 'temp_index' [-Wunused-variable] CXX layered.lo CXX lb.lo CXX lb-boundaries.lo lb.cpp: In function 'void lb_reinit_parameters()': lb.cpp:1830:3: warning: format '%f' expects argument of type 'double', but argument 9 has type 'double*' [-Wformat] lb.cpp:1830:3: warning: format '%f' expects argument of type 'double', but argument 10 has type 'double*' [-Wformat] CXX lbgpu.lo CXX metadynamics.lo CXX modes.lo CXX molforces.lo CXX mol_cut.lo CXX nemd.lo CXX nsquare.lo CXX particle_data.lo lb.cpp: At global scope: lb.cpp:152:12: warning: 'failcounter' defined but not used [-Wunused-variable] CXX polymer.lo CXX pressure.lo CXX random.lo CXX rattle.lo CXX reaction.lo CXX rotation.lo CXX specfunc.lo CXX statistics.lo CXX statistics_chain.lo CXX statistics_cluster.lo CXX statistics_correlation.lo CXX statistics_fluid.lo CXX statistics_molecule.lo CXX statistics_observable.lo CXX statistics_wallstuff.lo CXX thermostat.lo statistics_observable.cpp: In function 'int observable_calc_radial_density_profile(observable*)': statistics_observable.cpp:631:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_radial_flux_density_profile(observable*)': statistics_observable.cpp:683:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_flux_density_profile(observable*)': statistics_observable.cpp:765:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_particle_positions(observable*)': statistics_observable.cpp:801:16: warning: unused variable 'i' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_calc_particle_forces(observable*)': statistics_observable.cpp:821:16: warning: unused variable 'i' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_reset_average(observable*)': statistics_observable.cpp:885:9: warning: unused variable 'error' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_calculate(observable*)': statistics_observable.cpp:41:10: warning: 'temp' may be used uninitialized in this function [-Wmaybe-uninitialized] statistics_observable.cpp: In function 'int observable_update(observable*)': statistics_observable.cpp:49:10: warning: 'temp' may be used uninitialized in this function [-Wmaybe-uninitialized] CXX topology.lo CXX tuning.lo CXX uwerr.lo CXX verlet.lo CXX virtual_sites.lo CXX virtual_sites_com.lo CXX virtual_sites_relative.lo CXX vmdsock.lo CXX ghmc.lo CXX EspressoSystemInterface.lo CXX bmhtf-nacl.lo CXX buckingham.lo CXX dpd.lo CXX gaussian.lo CXX gb.lo CXX hat.lo CXX hertzian.lo CXX lj.lo CXX ljangle.lo CXX ljcos.lo CXX ljcos2.lo CXX ljgen.lo CXX morse.lo CXX soft_sphere.lo CXX steppot.lo CXX tab.lo CXX tunable_slip.lo CXX angle.lo CXX angle_harmonic.lo CXX angle_cosine.lo CXX angle_cossquare.lo CXX angledist.lo CXX dihedral.lo CXX endangledist.lo endangledist.cpp: In function 'int calc_endangledist_pair_force(Particle*, Particle*, Bonded_ia_parameters*, double*, double*, double*)': endangledist.cpp:239:3: warning: too many arguments for format [-Wformat-extra-args] CXX fene.lo endangledist.cpp:239:3: warning: 'fac_b' may be used uninitialized in this function [-Wmaybe-uninitialized] endangledist.cpp:239:3: warning: 'fac_a' may be used uninitialized in this function [-Wmaybe-uninitialized] endangledist.cpp:239:3: warning: 'dist' may be used uninitialized in this function [-Wmaybe-uninitialized] CXX harmonic.lo CXX overlap.lo CXX subt_lj.lo CXX debye_hueckel.lo CXX elc.lo CXX magnetic_non_p3m_methods.lo CXX mdlc_correction.lo CXX maggs.lo CXX mmm1d.lo CXX mmm2d.lo CXX mmm-common.lo CXX p3m.lo CXX p3m-common.lo CXX p3m-dipolar.lo CXX reaction_field.lo NVCC cuda_init_cuda.lo NVCC cuda_common_cuda.lo NVCC electrokinetics_cuda.lo NVCC lbgpu_cuda.lo lbgpu_cuda.cu(3531): warning: variable "Rho" was declared but never referenced NVCC p3m_gpu_cuda.lo NVCC EspressoSystemInterface_cuda.lo lbgpu_cuda.cu(3531): warning: variable "Rho" was declared but never referenced NVCC HarmonicForce.lo GEN config-version.cpp CXX object-in-fluid/area_force_local.lo CXX object-in-fluid/area_force_global.lo CXX object-in-fluid/bending_force.lo CXX object-in-fluid/stretching_force.lo CXX object-in-fluid/stretchlin_force.lo CXX object-in-fluid/volume_force.lo CXX config-version.lo CXXLD libEspresso.la make[3]: Leaving directory ` Making all in tcl make[3]: Entering directory ` CXX binary_file_tcl.lo CXX bin_tcl.lo CXX blockfile_tcl.lo CXX cells_tcl.lo CXX channels_tcl.lo CXX collision_tcl.lo CXX comfixed_tcl.lo CXX comforce_tcl.lo CXX config_tcl.lo CXX constraint_tcl.lo CXX domain_decomposition_tcl.lo CXX electrokinetics_tcl.lo CXX external_potential_tcl.lo CXX energy_tcl.lo external_potential_tcl.cpp: In function 'int tclcommand_external_potential_tabulated(Tcl_Interp*, int, char**, ExternalPotential*)': external_potential_tcl.cpp:31:7: warning: unused variable 'type' [-Wunused-variable] external_potential_tcl.cpp:32:10: warning: unused variable 'scale' [-Wunused-variable] CXX galilei_tcl.lo CXX global_tcl.lo CXX grid_tcl.lo CXX iccp3m_tcl.lo CXX imd_tcl.lo CXX initialize_interpreter.lo initialize_interpreter.cpp:28:25: fatal error: cells_tcl.hpp: No such file or directory compilation terminated. make[3]: *** [initialize_interpreter.lo] Error 1 make[3]: *** Waiting for unfinished jobs.... iccp3m_tcl.cpp: In function 'int tclcommand_iccp3m_parse_normals(Tcl_Interp*, int, char*)': iccp3m_tcl.cpp:191:9: warning: unused variable 'token' [-Wunused-variable] iccp3m_tcl.cpp:192:7: warning: unused variable 'scan_succes' [-Wunused-variable] iccp3m_tcl.cpp:196:14: warning: unused variable 'opening_bracket' [-Wunused-variable] iccp3m_tcl.cpp:197:14: warning: unused variable 'closing_bracket' [-Wunused-variable] iccp3m_tcl.cpp:198:14: warning: unused variable 'space' [-Wunused-variable] iccp3m_tcl.cpp:200:14: warning: unused variable 'delimiters' [-Wunused-variable] make[3]: Leaving directory ` make[2]: *** [all-recursive] Error 1 make[2]: Leaving directory ` make[1]: *** [all] Error 2 make[1]: Leaving directory ` make: *** [all-recursive] Error 1 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE Archiving artifacts From MAILER-DAEMON Sun May 25 22:13:11 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WokPX-0005gS-HD for mharc-espressomd-maintainer@gnu.org; Sun, 25 May 2014 22:13:11 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:37583) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WokPR-0005eP-4i for espressomd-maintainer@nongnu.org; Sun, 25 May 2014 22:13:10 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WokPL-0000L0-Hs for espressomd-maintainer@nongnu.org; Sun, 25 May 2014 22:13:05 -0400 Received: from charon-out.rus.uni-stuttgart.de ([2001:7c0:2041:25::1:1]:58502 helo=charon.rus.uni-stuttgart.de) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WokPL-0000Kl-8A for espressomd-maintainer@nongnu.org; Sun, 25 May 2014 22:12:59 -0400 Received: from localhost (localhost [127.0.0.1]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP id 18E855FDCD for ; Mon, 26 May 2014 04:12:58 +0200 (CEST) X-Virus-Scanned: by amavisd-new at charon.rus.uni-stuttgart.de Received: from charon.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (charon.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id iMmrwAR2ic5I for ; Mon, 26 May 2014 04:12:53 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (ica1.uni-stuttgart.de [129.69.120.76]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Mon, 26 May 2014 04:12:53 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 1FECCA40EE for ; Mon, 26 May 2014 04:12:53 +0200 (CEST) Date: Mon, 26 May 2014 04:12:52 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <532434.25.1401070373026.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: default,3core X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2001:7c0:2041:25::1:1 Subject: [Espressomd-maintainer] =?utf-8?q?Build_failed_in_Jenkins=3A_mast?= =?utf-8?q?er-nightly-multiconfig_=C2=BB_default=2C3core_=2394?= X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Mon, 26 May 2014 02:13:10 -0000 See Changes: [Axel Arnold] particle print no longer checks for runtime errors, which cannot occur anyways [Axel Arnold] Removed the dysfunctional invalidate_system, updated checkpointing documentation. [Axel Arnold] Removed invalidate_system voodoo from tests ------------------------------------------ [...truncated 313 lines...] build python interface = no Other settings -------------- config = myconfig.hpp installation prefix = /home/jenkins/Espresso number of test tasks = 8 mympiexec = mpiexec = /usr/lib64/mpi/gcc/openmpi/bin/mpiexec pdflatex = /usr/bin/pdflatex makeindex = /usr/bin/makeindex bibtex = /usr/bin/bibtex doxygen = /usr/bin/doxygen dot = /usr/bin/dot Not building Python interface. END CONFIGURE + maintainer/jenkins/build.sh 14036 (process ID) old priority 0, new priority 5 srcdir= builddir= insource=true parallelism=3core START BUILD myconfig=default build_procs=4 Using default myconfig. >make -j 4 Making all in config make[1]: Entering directory ` make[1]: Nothing to be done for `all'. make[1]: Leaving directory ` Making all in src make[1]: Entering directory ` GEN config-features.hpp GEN myconfig-final.hpp <= ./myconfig-default.hpp GEN config-features.cpp make all-recursive make[2]: Entering directory ` Making all in . make[3]: Entering directory ` CXX config-features.lo CXX collision.lo CXX cells.lo CXX communication.lo CXX comfixed.lo CXX comforce.lo CXX constraint.lo CXX cuda_interface.lo CXX debug.lo CXX domain_decomposition.lo CXX electrokinetics_pdb_parse.lo CXX energy.lo CXX external_potential.lo CXX errorhandling.lo CXX fft.lo CXX fft-common.lo external_potential.cpp: In function 'int lattice_read_file(Lattice*, char*)': external_potential.cpp:176:46: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] CXX fft-dipolar.lo CXX forcecap.lo CXX forces.lo CXX galilei.lo CXX ghosts.lo CXX global.lo CXX grid.lo CXX halo.lo CXX iccp3m.lo CXX imd.lo CXX initialize.lo CXX integrate.lo CXX interaction_data.lo CXX lattice.lo CXX layered.lo lattice.cpp: In function 'void _lattice_allocate_memory(Lattice*)': lattice.cpp:101:79: warning: overflow in implicit constant conversion [-Woverflow] lattice.cpp: In function 'void lattice_interpolate_linear_gradient(Lattice*, double*, double*)': lattice.cpp:151:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:156:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:163:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:170:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:177:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:184:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:191:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:198:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:205:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:145:11: warning: unused variable 'w' [-Wunused-variable] lattice.cpp:145:17: warning: unused variable 'wd' [-Wunused-variable] lattice.cpp:146:12: warning: unused variable 'temp_index' [-Wunused-variable] lattice.cpp: In function 'void lattice_interpolate_linear(Lattice*, double*, double*)': lattice.cpp:253:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:260:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:234:12: warning: unused variable 'temp_index' [-Wunused-variable] CXX lb.lo CXX lb-boundaries.lo CXX lbgpu.lo CXX metadynamics.lo CXX modes.lo CXX molforces.lo CXX mol_cut.lo CXX nemd.lo CXX nsquare.lo CXX particle_data.lo CXX polymer.lo CXX pressure.lo CXX random.lo CXX rattle.lo CXX reaction.lo CXX rotation.lo CXX specfunc.lo CXX statistics.lo CXX statistics_chain.lo CXX statistics_cluster.lo CXX statistics_correlation.lo CXX statistics_fluid.lo CXX statistics_molecule.lo CXX statistics_observable.lo CXX statistics_wallstuff.lo statistics_observable.cpp: In function 'int observable_calc_radial_density_profile(observable*)': statistics_observable.cpp:631:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_radial_flux_density_profile(observable*)': statistics_observable.cpp:683:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_flux_density_profile(observable*)': statistics_observable.cpp:765:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_particle_positions(observable*)': statistics_observable.cpp:801:16: warning: unused variable 'i' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_calc_particle_forces(observable*)': statistics_observable.cpp:821:16: warning: unused variable 'i' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_reset_average(observable*)': statistics_observable.cpp:885:9: warning: unused variable 'error' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_calculate(observable*)': statistics_observable.cpp:41:10: warning: 'temp' may be used uninitialized in this function [-Wmaybe-uninitialized] statistics_observable.cpp: In function 'int observable_update(observable*)': statistics_observable.cpp:49:10: warning: 'temp' may be used uninitialized in this function [-Wmaybe-uninitialized] CXX thermostat.lo CXX topology.lo CXX tuning.lo CXX uwerr.lo CXX verlet.lo CXX virtual_sites.lo CXX virtual_sites_com.lo CXX virtual_sites_relative.lo CXX vmdsock.lo CXX ghmc.lo CXX EspressoSystemInterface.lo CXX bmhtf-nacl.lo CXX buckingham.lo CXX dpd.lo CXX gaussian.lo CXX gb.lo CXX hat.lo CXX hertzian.lo CXX lj.lo CXX ljangle.lo CXX ljcos.lo CXX ljcos2.lo CXX ljgen.lo CXX morse.lo CXX soft_sphere.lo CXX steppot.lo CXX tab.lo CXX tunable_slip.lo CXX angle.lo CXX angle_harmonic.lo CXX angle_cosine.lo CXX angle_cossquare.lo CXX angledist.lo CXX dihedral.lo CXX endangledist.lo CXX fene.lo CXX harmonic.lo CXX overlap.lo CXX subt_lj.lo CXX debye_hueckel.lo CXX elc.lo CXX magnetic_non_p3m_methods.lo CXX mdlc_correction.lo CXX maggs.lo CXX mmm1d.lo CXX mmm2d.lo CXX mmm-common.lo CXX p3m.lo CXX p3m-common.lo CXX p3m-dipolar.lo CXX reaction_field.lo NVCC cuda_init_cuda.lo NVCC cuda_common_cuda.lo NVCC electrokinetics_cuda.lo NVCC lbgpu_cuda.lo NVCC p3m_gpu_cuda.lo NVCC EspressoSystemInterface_cuda.lo NVCC HarmonicForce.lo GEN config-version.cpp CXX object-in-fluid/area_force_local.lo CXX object-in-fluid/area_force_global.lo CXX object-in-fluid/bending_force.lo CXX object-in-fluid/stretching_force.lo CXX object-in-fluid/stretchlin_force.lo CXX object-in-fluid/volume_force.lo CXX config-version.lo CXXLD libEspresso.la make[3]: Leaving directory ` Making all in tcl make[3]: Entering directory ` CXX bin_tcl.lo CXX binary_file_tcl.lo CXX blockfile_tcl.lo CXX cells_tcl.lo CXX channels_tcl.lo CXX collision_tcl.lo CXX comfixed_tcl.lo CXX comforce_tcl.lo CXX config_tcl.lo CXX constraint_tcl.lo CXX domain_decomposition_tcl.lo CXX electrokinetics_tcl.lo CXX external_potential_tcl.lo CXX energy_tcl.lo CXX galilei_tcl.lo external_potential_tcl.cpp: In function 'int tclcommand_external_potential_tabulated(Tcl_Interp*, int, char**, ExternalPotential*)': external_potential_tcl.cpp:31:7: warning: unused variable 'type' [-Wunused-variable] external_potential_tcl.cpp:32:10: warning: unused variable 'scale' [-Wunused-variable] CXX global_tcl.lo CXX grid_tcl.lo CXX iccp3m_tcl.lo CXX imd_tcl.lo CXX initialize_interpreter.lo initialize_interpreter.cpp:28:25: fatal error: cells_tcl.hpp: No such file or directory compilation terminated. make[3]: *** [initialize_interpreter.lo] Error 1 make[3]: *** Waiting for unfinished jobs.... iccp3m_tcl.cpp: In function 'int tclcommand_iccp3m_parse_normals(Tcl_Interp*, int, char*)': iccp3m_tcl.cpp:191:9: warning: unused variable 'token' [-Wunused-variable] iccp3m_tcl.cpp:192:7: warning: unused variable 'scan_succes' [-Wunused-variable] iccp3m_tcl.cpp:196:14: warning: unused variable 'opening_bracket' [-Wunused-variable] iccp3m_tcl.cpp:197:14: warning: unused variable 'closing_bracket' [-Wunused-variable] iccp3m_tcl.cpp:198:14: warning: unused variable 'space' [-Wunused-variable] iccp3m_tcl.cpp:200:14: warning: unused variable 'delimiters' [-Wunused-variable] make[3]: Leaving directory ` make[2]: *** [all-recursive] Error 1 make[2]: Leaving directory ` make[1]: *** [all] Error 2 make[1]: Leaving directory ` make: *** [all-recursive] Error 1 + exit 1 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE From MAILER-DAEMON Sun May 25 22:13:14 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WokPa-0005iG-Km for mharc-espressomd-maintainer@gnu.org; Sun, 25 May 2014 22:13:14 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:37591) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WokPT-0005ec-SH for espressomd-maintainer@nongnu.org; Sun, 25 May 2014 22:13:13 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WokPL-0000L5-Ic for espressomd-maintainer@nongnu.org; Sun, 25 May 2014 22:13:07 -0400 Received: from hydra-out.rus.uni-stuttgart.de ([2001:7c0:2041:25::1:3]:36950 helo=hydra.rus.uni-stuttgart.de) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WokPL-0000Kp-85 for espressomd-maintainer@nongnu.org; Sun, 25 May 2014 22:12:59 -0400 Received: from localhost (localhost [127.0.0.1]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP id 457C812C87E for ; Mon, 26 May 2014 04:12:58 +0200 (CEST) X-Virus-Scanned: by amavisd-new at hydra.rus.uni-stuttgart.de Received: from hydra.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (hydra.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id NE1VCtly-p62 for ; Mon, 26 May 2014 04:12:53 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (smtp.icp.uni-stuttgart.de [129.69.120.76]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Mon, 26 May 2014 04:12:53 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 507D0A40F1 for ; Mon, 26 May 2014 04:12:53 +0200 (CEST) Date: Mon, 26 May 2014 04:12:53 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1908675915.26.1401070373269.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: default,nompi X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2001:7c0:2041:25::1:3 Subject: [Espressomd-maintainer] =?utf-8?q?Build_failed_in_Jenkins=3A_mast?= =?utf-8?q?er-nightly-multiconfig_=C2=BB_default=2Cnompi_=2394?= X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Mon, 26 May 2014 02:13:13 -0000 See Changes: [Axel Arnold] particle print no longer checks for runtime errors, which cannot occur anyways [Axel Arnold] Removed the dysfunctional invalidate_system, updated checkpointing documentation. [Axel Arnold] Removed invalidate_system voodoo from tests ------------------------------------------ [...truncated 312 lines...] Other settings -------------- config = myconfig.hpp installation prefix = /home/jenkins/Espresso number of test tasks = 8 mympiexec = mpiexec = pdflatex = /usr/bin/pdflatex makeindex = /usr/bin/makeindex bibtex = /usr/bin/bibtex doxygen = /usr/bin/doxygen dot = /usr/bin/dot WARNING: MPI disabled or not supported! Parallelization turned off. Not building Python interface. END CONFIGURE + maintainer/jenkins/build.sh 25284 (process ID) old priority 0, new priority 5 srcdir= builddir= insource=true parallelism=nompi START BUILD myconfig=default build_procs=4 Using default myconfig. >make -j 4 Making all in config make[1]: Entering directory ` make[1]: Nothing to be done for `all'. make[1]: Leaving directory ` Making all in src make[1]: Entering directory ` GEN myconfig-final.hpp <= ./myconfig-default.hpp GEN config-features.cpp GEN config-features.hpp make all-recursive make[2]: Entering directory ` Making all in . make[3]: Entering directory ` CXX config-features.lo CXX cells.lo CXX collision.lo CXX communication.lo CXX comfixed.lo CXX comforce.lo CXX constraint.lo CXX cuda_interface.lo CXX debug.lo CXX domain_decomposition.lo CXX electrokinetics_pdb_parse.lo CXX energy.lo CXX external_potential.lo CXX errorhandling.lo external_potential.cpp: In function 'int lattice_read_file(Lattice*, char*)': external_potential.cpp:176:46: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] CXX fft.lo CXX fft-common.lo CXX fft-dipolar.lo CXX forcecap.lo CXX forces.lo CXX galilei.lo CXX ghosts.lo CXX global.lo CXX grid.lo CXX halo.lo CXX iccp3m.lo CXX imd.lo CXX initialize.lo CXX integrate.lo CXX interaction_data.lo CXX lattice.lo CXX layered.lo CXX lb.lo lattice.cpp: In function 'void _lattice_allocate_memory(Lattice*)': lattice.cpp:101:79: warning: overflow in implicit constant conversion [-Woverflow] lattice.cpp: In function 'void lattice_interpolate_linear_gradient(Lattice*, double*, double*)': lattice.cpp:151:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:156:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:163:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:170:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:177:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:184:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:191:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:198:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:205:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:145:11: warning: unused variable 'w' [-Wunused-variable] lattice.cpp:145:17: warning: unused variable 'wd' [-Wunused-variable] lattice.cpp:146:12: warning: unused variable 'temp_index' [-Wunused-variable] lattice.cpp: In function 'void lattice_interpolate_linear(Lattice*, double*, double*)': lattice.cpp:253:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:260:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:234:12: warning: unused variable 'temp_index' [-Wunused-variable] CXX lb-boundaries.lo CXX lbgpu.lo CXX metadynamics.lo CXX modes.lo CXX molforces.lo CXX mol_cut.lo CXX nemd.lo CXX nsquare.lo CXX particle_data.lo CXX polymer.lo CXX pressure.lo CXX random.lo CXX rattle.lo CXX reaction.lo CXX rotation.lo CXX specfunc.lo CXX statistics.lo CXX statistics_chain.lo CXX statistics_cluster.lo CXX statistics_correlation.lo CXX statistics_fluid.lo CXX statistics_molecule.lo CXX statistics_observable.lo CXX statistics_wallstuff.lo CXX thermostat.lo statistics_observable.cpp: In function 'int observable_calc_radial_density_profile(observable*)': statistics_observable.cpp:631:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_radial_flux_density_profile(observable*)': statistics_observable.cpp:683:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_flux_density_profile(observable*)': statistics_observable.cpp:765:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_particle_positions(observable*)': statistics_observable.cpp:801:16: warning: unused variable 'i' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_calc_particle_forces(observable*)': statistics_observable.cpp:821:16: warning: unused variable 'i' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_reset_average(observable*)': statistics_observable.cpp:885:9: warning: unused variable 'error' [-Wunused-variable] CXX topology.lo statistics_observable.cpp: In function 'int observable_calculate(observable*)': statistics_observable.cpp:41:10: warning: 'temp' may be used uninitialized in this function [-Wmaybe-uninitialized] statistics_observable.cpp: In function 'int observable_update(observable*)': statistics_observable.cpp:49:10: warning: 'temp' may be used uninitialized in this function [-Wmaybe-uninitialized] CXX tuning.lo CXX uwerr.lo CXX verlet.lo CXX virtual_sites.lo CXX virtual_sites_com.lo CXX virtual_sites_relative.lo CXX vmdsock.lo CXX ghmc.lo CXX EspressoSystemInterface.lo CXX bmhtf-nacl.lo CXX buckingham.lo CXX dpd.lo CXX gaussian.lo CXX gb.lo CXX hat.lo CXX hertzian.lo CXX lj.lo CXX ljangle.lo CXX ljcos.lo CXX ljcos2.lo CXX ljgen.lo CXX morse.lo CXX soft_sphere.lo CXX steppot.lo CXX tab.lo CXX tunable_slip.lo CXX angle.lo CXX angle_harmonic.lo CXX angle_cosine.lo CXX angle_cossquare.lo CXX angledist.lo CXX dihedral.lo CXX endangledist.lo CXX fene.lo CXX harmonic.lo CXX overlap.lo CXX subt_lj.lo CXX debye_hueckel.lo CXX elc.lo CXX magnetic_non_p3m_methods.lo CXX mdlc_correction.lo CXX maggs.lo CXX mmm1d.lo CXX mmm2d.lo CXX mmm-common.lo CXX p3m.lo CXX p3m-common.lo CXX p3m-dipolar.lo CXX reaction_field.lo NVCC cuda_init_cuda.lo NVCC cuda_common_cuda.lo NVCC electrokinetics_cuda.lo NVCC lbgpu_cuda.lo NVCC p3m_gpu_cuda.lo NVCC EspressoSystemInterface_cuda.lo NVCC HarmonicForce.lo GEN config-version.cpp CXX object-in-fluid/area_force_local.lo CXX object-in-fluid/area_force_global.lo CXX object-in-fluid/bending_force.lo CXX object-in-fluid/stretching_force.lo CXX object-in-fluid/stretchlin_force.lo CXX object-in-fluid/volume_force.lo CXX config-version.lo CXX mpifake/mpi.lo CXXLD libEspresso.la make[3]: Leaving directory ` Making all in tcl make[3]: Entering directory ` CXX binary_file_tcl.lo CXX bin_tcl.lo CXX blockfile_tcl.lo CXX cells_tcl.lo CXX channels_tcl.lo CXX collision_tcl.lo CXX comfixed_tcl.lo CXX comforce_tcl.lo CXX constraint_tcl.lo CXX domain_decomposition_tcl.lo CXX config_tcl.lo CXX electrokinetics_tcl.lo CXX external_potential_tcl.lo CXX energy_tcl.lo CXX galilei_tcl.lo external_potential_tcl.cpp: In function 'int tclcommand_external_potential_tabulated(Tcl_Interp*, int, char**, ExternalPotential*)': external_potential_tcl.cpp:31:7: warning: unused variable 'type' [-Wunused-variable] external_potential_tcl.cpp:32:10: warning: unused variable 'scale' [-Wunused-variable] CXX global_tcl.lo CXX grid_tcl.lo CXX iccp3m_tcl.lo CXX imd_tcl.lo CXX initialize_interpreter.lo initialize_interpreter.cpp:28:25: fatal error: cells_tcl.hpp: No such file or directory compilation terminated. make[3]: *** [initialize_interpreter.lo] Error 1 make[3]: *** Waiting for unfinished jobs.... iccp3m_tcl.cpp: In function 'int tclcommand_iccp3m_parse_normals(Tcl_Interp*, int, char*)': iccp3m_tcl.cpp:191:9: warning: unused variable 'token' [-Wunused-variable] iccp3m_tcl.cpp:192:7: warning: unused variable 'scan_succes' [-Wunused-variable] iccp3m_tcl.cpp:196:14: warning: unused variable 'opening_bracket' [-Wunused-variable] iccp3m_tcl.cpp:197:14: warning: unused variable 'closing_bracket' [-Wunused-variable] iccp3m_tcl.cpp:198:14: warning: unused variable 'space' [-Wunused-variable] iccp3m_tcl.cpp:200:14: warning: unused variable 'delimiters' [-Wunused-variable] make[3]: Leaving directory ` make[2]: *** [all-recursive] Error 1 make[2]: Leaving directory ` make[1]: *** [all] Error 2 make[1]: Leaving directory ` make: *** [all-recursive] Error 1 + exit 1 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE From MAILER-DAEMON Sun May 25 22:13:16 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WokPc-0005iy-OX for mharc-espressomd-maintainer@gnu.org; Sun, 25 May 2014 22:13:16 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:37601) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WokPV-0005fV-MM for espressomd-maintainer@nongnu.org; Sun, 25 May 2014 22:13:15 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WokPP-0000Lt-RO for espressomd-maintainer@nongnu.org; Sun, 25 May 2014 22:13:09 -0400 Received: from charon.rus.uni-stuttgart.de ([129.69.192.1]:57032) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WokPP-0000Le-Cd for espressomd-maintainer@nongnu.org; Sun, 25 May 2014 22:13:03 -0400 Received: from localhost (localhost [127.0.0.1]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP id A423F5FDCD for ; Mon, 26 May 2014 04:13:02 +0200 (CEST) X-Virus-Scanned: by amavisd-new at charon.rus.uni-stuttgart.de Received: from charon.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (charon.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id GWhWUjTxtizu for ; Mon, 26 May 2014 04:12:57 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (anoa.ica1.uni-stuttgart.de [129.69.120.76]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Mon, 26 May 2014 04:12:57 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id B81FBA40F5 for ; Mon, 26 May 2014 04:12:57 +0200 (CEST) Date: Mon, 26 May 2014 04:12:57 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <366012109.27.1401070377750.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: default,4core X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.1 Subject: [Espressomd-maintainer] =?utf-8?q?Build_failed_in_Jenkins=3A_mast?= =?utf-8?q?er-nightly-multiconfig_=C2=BB_default=2C4core_=2394?= X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Mon, 26 May 2014 02:13:15 -0000 See Changes: [Axel Arnold] particle print no longer checks for runtime errors, which cannot occur anyways [Axel Arnold] Removed the dysfunctional invalidate_system, updated checkpointing documentation. [Axel Arnold] Removed invalidate_system voodoo from tests ------------------------------------------ [...truncated 313 lines...] build python interface = no Other settings -------------- config = myconfig.hpp installation prefix = /home/jenkins/Espresso number of test tasks = 8 mympiexec = mpiexec = /usr/lib64/mpi/gcc/openmpi/bin/mpiexec pdflatex = /usr/bin/pdflatex makeindex = /usr/bin/makeindex bibtex = /usr/bin/bibtex doxygen = /usr/bin/doxygen dot = /usr/bin/dot Not building Python interface. END CONFIGURE + maintainer/jenkins/build.sh 16829 (process ID) old priority 0, new priority 5 srcdir= builddir= insource=true parallelism=4core START BUILD myconfig=default build_procs=4 Using default myconfig. >make -j 4 Making all in config make[1]: Entering directory ` make[1]: Nothing to be done for `all'. make[1]: Leaving directory ` Making all in src make[1]: Entering directory ` GEN config-features.hpp GEN myconfig-final.hpp <= ./myconfig-default.hpp GEN config-features.cpp make all-recursive make[2]: Entering directory ` Making all in . make[3]: Entering directory ` CXX cells.lo CXX config-features.lo CXX collision.lo CXX communication.lo CXX comfixed.lo CXX comforce.lo CXX constraint.lo CXX cuda_interface.lo CXX debug.lo CXX domain_decomposition.lo CXX electrokinetics_pdb_parse.lo CXX energy.lo CXX external_potential.lo CXX errorhandling.lo CXX fft.lo CXX fft-common.lo external_potential.cpp: In function 'int lattice_read_file(Lattice*, char*)': external_potential.cpp:176:46: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] CXX fft-dipolar.lo CXX forcecap.lo CXX forces.lo CXX galilei.lo CXX ghosts.lo CXX global.lo CXX grid.lo CXX halo.lo CXX iccp3m.lo CXX imd.lo CXX initialize.lo CXX integrate.lo CXX interaction_data.lo CXX lattice.lo CXX layered.lo lattice.cpp: In function 'void _lattice_allocate_memory(Lattice*)': lattice.cpp:101:79: warning: overflow in implicit constant conversion [-Woverflow] lattice.cpp: In function 'void lattice_interpolate_linear_gradient(Lattice*, double*, double*)': lattice.cpp:151:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:156:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:163:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:170:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:177:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:184:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:191:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:198:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:205:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:145:11: warning: unused variable 'w' [-Wunused-variable] lattice.cpp:145:17: warning: unused variable 'wd' [-Wunused-variable] lattice.cpp:146:12: warning: unused variable 'temp_index' [-Wunused-variable] lattice.cpp: In function 'void lattice_interpolate_linear(Lattice*, double*, double*)': lattice.cpp:253:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:260:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:234:12: warning: unused variable 'temp_index' [-Wunused-variable] CXX lb.lo CXX lb-boundaries.lo CXX lbgpu.lo CXX metadynamics.lo CXX modes.lo CXX molforces.lo CXX mol_cut.lo CXX nemd.lo CXX nsquare.lo CXX particle_data.lo CXX polymer.lo CXX pressure.lo CXX random.lo CXX rattle.lo CXX reaction.lo CXX rotation.lo CXX specfunc.lo CXX statistics.lo CXX statistics_chain.lo CXX statistics_cluster.lo CXX statistics_correlation.lo CXX statistics_fluid.lo CXX statistics_molecule.lo CXX statistics_observable.lo CXX statistics_wallstuff.lo CXX thermostat.lo statistics_observable.cpp: In function 'int observable_calc_radial_density_profile(observable*)': statistics_observable.cpp:631:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_radial_flux_density_profile(observable*)': statistics_observable.cpp:683:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_flux_density_profile(observable*)': statistics_observable.cpp:765:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_particle_positions(observable*)': statistics_observable.cpp:801:16: warning: unused variable 'i' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_calc_particle_forces(observable*)': statistics_observable.cpp:821:16: warning: unused variable 'i' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_reset_average(observable*)': statistics_observable.cpp:885:9: warning: unused variable 'error' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_calculate(observable*)': statistics_observable.cpp:41:10: warning: 'temp' may be used uninitialized in this function [-Wmaybe-uninitialized] statistics_observable.cpp: In function 'int observable_update(observable*)': statistics_observable.cpp:49:10: warning: 'temp' may be used uninitialized in this function [-Wmaybe-uninitialized] CXX topology.lo CXX tuning.lo CXX uwerr.lo CXX verlet.lo CXX virtual_sites.lo CXX virtual_sites_com.lo CXX virtual_sites_relative.lo CXX vmdsock.lo CXX ghmc.lo CXX EspressoSystemInterface.lo CXX bmhtf-nacl.lo CXX buckingham.lo CXX dpd.lo CXX gaussian.lo CXX gb.lo CXX hat.lo CXX hertzian.lo CXX lj.lo CXX ljangle.lo CXX ljcos.lo CXX ljcos2.lo CXX ljgen.lo CXX morse.lo CXX soft_sphere.lo CXX steppot.lo CXX tab.lo CXX tunable_slip.lo CXX angle.lo CXX angle_harmonic.lo CXX angle_cosine.lo CXX angle_cossquare.lo CXX angledist.lo CXX dihedral.lo CXX endangledist.lo CXX fene.lo CXX harmonic.lo CXX overlap.lo CXX subt_lj.lo CXX debye_hueckel.lo CXX elc.lo CXX magnetic_non_p3m_methods.lo CXX mdlc_correction.lo CXX maggs.lo CXX mmm1d.lo CXX mmm2d.lo CXX mmm-common.lo CXX p3m.lo CXX p3m-common.lo CXX p3m-dipolar.lo CXX reaction_field.lo NVCC cuda_init_cuda.lo NVCC cuda_common_cuda.lo NVCC electrokinetics_cuda.lo NVCC lbgpu_cuda.lo NVCC p3m_gpu_cuda.lo NVCC EspressoSystemInterface_cuda.lo NVCC HarmonicForce.lo GEN config-version.cpp CXX object-in-fluid/area_force_local.lo CXX object-in-fluid/area_force_global.lo CXX object-in-fluid/bending_force.lo CXX object-in-fluid/stretching_force.lo CXX object-in-fluid/stretchlin_force.lo CXX object-in-fluid/volume_force.lo CXX config-version.lo CXXLD libEspresso.la make[3]: Leaving directory ` Making all in tcl make[3]: Entering directory ` CXX bin_tcl.lo CXX binary_file_tcl.lo CXX blockfile_tcl.lo CXX cells_tcl.lo CXX channels_tcl.lo CXX collision_tcl.lo CXX comfixed_tcl.lo CXX comforce_tcl.lo CXX config_tcl.lo CXX constraint_tcl.lo CXX domain_decomposition_tcl.lo CXX electrokinetics_tcl.lo CXX external_potential_tcl.lo CXX energy_tcl.lo external_potential_tcl.cpp: In function 'int tclcommand_external_potential_tabulated(Tcl_Interp*, int, char**, ExternalPotential*)': external_potential_tcl.cpp:31:7: warning: unused variable 'type' [-Wunused-variable] external_potential_tcl.cpp:32:10: warning: unused variable 'scale' [-Wunused-variable] CXX galilei_tcl.lo CXX global_tcl.lo CXX grid_tcl.lo CXX iccp3m_tcl.lo CXX imd_tcl.lo CXX initialize_interpreter.lo initialize_interpreter.cpp:28:25: fatal error: cells_tcl.hpp: No such file or directory compilation terminated. make[3]: *** [initialize_interpreter.lo] Error 1 make[3]: *** Waiting for unfinished jobs.... iccp3m_tcl.cpp: In function 'int tclcommand_iccp3m_parse_normals(Tcl_Interp*, int, char*)': iccp3m_tcl.cpp:191:9: warning: unused variable 'token' [-Wunused-variable] iccp3m_tcl.cpp:192:7: warning: unused variable 'scan_succes' [-Wunused-variable] iccp3m_tcl.cpp:196:14: warning: unused variable 'opening_bracket' [-Wunused-variable] iccp3m_tcl.cpp:197:14: warning: unused variable 'closing_bracket' [-Wunused-variable] iccp3m_tcl.cpp:198:14: warning: unused variable 'space' [-Wunused-variable] iccp3m_tcl.cpp:200:14: warning: unused variable 'delimiters' [-Wunused-variable] make[3]: Leaving directory ` make[2]: *** [all-recursive] Error 1 make[2]: Leaving directory ` make[1]: *** [all] Error 2 make[1]: Leaving directory ` make: *** [all-recursive] Error 1 + exit 1 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE From MAILER-DAEMON Mon May 26 03:20:58 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WopDO-00069c-6Z for mharc-espressomd-maintainer@gnu.org; Mon, 26 May 2014 03:20:58 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:44286) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WopDG-0005sT-IR for espressomd-maintainer@nongnu.org; Mon, 26 May 2014 03:20:56 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1WopDA-0007QY-W7 for espressomd-maintainer@nongnu.org; Mon, 26 May 2014 03:20:50 -0400 Received: from hydra-out.rus.uni-stuttgart.de ([2001:7c0:2041:25::1:3]:58756 helo=hydra.rus.uni-stuttgart.de) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WopDA-0007QQ-JY for espressomd-maintainer@nongnu.org; Mon, 26 May 2014 03:20:44 -0400 Received: from localhost (localhost [127.0.0.1]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP id 10D0212C97D for ; Mon, 26 May 2014 09:20:43 +0200 (CEST) X-Virus-Scanned: by amavisd-new at hydra.rus.uni-stuttgart.de Received: from hydra.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (hydra.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id XQ_pCSATZY4B for ; Mon, 26 May 2014 09:20:38 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (mailrelay.icp.uni-stuttgart.de [129.69.120.76]) by hydra.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Mon, 26 May 2014 09:20:38 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 11BB5A40EE for ; Mon, 26 May 2014 09:20:38 +0200 (CEST) Date: Mon, 26 May 2014 09:20:37 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1688480125.28.1401088837975.JavaMail.jenkins@elk> In-Reply-To: <1867316234.20.1401042430382.JavaMail.jenkins@elk> References: <1867316234.20.1401042430382.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-build-check X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2001:7c0:2041:25::1:3 Subject: [Espressomd-maintainer] Build failed in Jenkins: master-build-check #179 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Mon, 26 May 2014 07:20:56 -0000 See Changes: [Olaf Lenz] Updated NEWS. [Olaf Lenz] Clarified docs on checkpointing. ------------------------------------------ [...truncated 341 lines...] Other settings -------------- config = myconfig.hpp installation prefix = /home/jenkins/Espresso number of test tasks = 8 mympiexec = mpiexec = /usr/lib64/mpi/gcc/openmpi/bin/mpiexec pdflatex = /usr/bin/pdflatex makeindex = /usr/bin/makeindex bibtex = /usr/bin/bibtex doxygen = /usr/bin/doxygen dot = /usr/bin/dot Not building Python interface. END CONFIGURE + maintainer/jenkins/build.sh srcdir= builddir= insource=true START BUILD myconfig=maxset build_procs=1 Copying maxset.hpp to >make -j 1 Making all in config make[1]: Entering directory ` make[1]: Nothing to be done for `all'. make[1]: Leaving directory ` Making all in src make[1]: Entering directory ` GEN myconfig-final.hpp <= ../myconfig.hpp GEN config-features.hpp make all-recursive make[2]: Entering directory ` Making all in . make[3]: Entering directory ` CXX config-features.lo CXX cells.lo CXX collision.lo CXX communication.lo CXX comfixed.lo CXX comforce.lo CXX constraint.lo CXX cuda_interface.lo CXX debug.lo CXX domain_decomposition.lo CXX electrokinetics_pdb_parse.lo CXX energy.lo CXX external_potential.lo external_potential.cpp: In function 'int lattice_read_file(Lattice*, char*)': external_potential.cpp:176:46: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] CXX errorhandling.lo CXX fft.lo CXX fft-common.lo CXX fft-dipolar.lo CXX forcecap.lo CXX forces.lo CXX galilei.lo CXX ghosts.lo CXX global.lo CXX grid.lo CXX halo.lo CXX iccp3m.lo CXX imd.lo CXX initialize.lo CXX integrate.lo CXX interaction_data.lo CXX lattice.lo lattice.cpp: In function 'void _lattice_allocate_memory(Lattice*)': lattice.cpp:101:79: warning: overflow in implicit constant conversion [-Woverflow] lattice.cpp: In function 'void lattice_interpolate_linear_gradient(Lattice*, double*, double*)': lattice.cpp:151:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:156:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:163:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:170:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:177:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:184:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:191:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:198:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:205:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:145:11: warning: unused variable 'w' [-Wunused-variable] lattice.cpp:145:17: warning: unused variable 'wd' [-Wunused-variable] lattice.cpp:146:12: warning: unused variable 'temp_index' [-Wunused-variable] lattice.cpp: In function 'void lattice_interpolate_linear(Lattice*, double*, double*)': lattice.cpp:253:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:260:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:234:12: warning: unused variable 'temp_index' [-Wunused-variable] CXX layered.lo CXX lb.lo CXX lb-boundaries.lo CXX lbgpu.lo CXX metadynamics.lo CXX modes.lo CXX molforces.lo CXX mol_cut.lo CXX nemd.lo CXX nsquare.lo CXX particle_data.lo CXX polymer.lo CXX pressure.lo CXX random.lo CXX rattle.lo CXX reaction.lo CXX rotation.lo CXX specfunc.lo CXX statistics.lo CXX statistics_chain.lo CXX statistics_cluster.lo CXX statistics_correlation.lo CXX statistics_fluid.lo CXX statistics_molecule.lo CXX statistics_observable.lo statistics_observable.cpp: In function 'int observable_calc_radial_density_profile(observable*)': statistics_observable.cpp:631:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_radial_flux_density_profile(observable*)': statistics_observable.cpp:683:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_flux_density_profile(observable*)': statistics_observable.cpp:765:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_particle_positions(observable*)': statistics_observable.cpp:801:16: warning: unused variable 'i' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_calc_particle_forces(observable*)': statistics_observable.cpp:821:16: warning: unused variable 'i' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_reset_average(observable*)': statistics_observable.cpp:885:9: warning: unused variable 'error' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_calculate(observable*)': statistics_observable.cpp:41:10: warning: 'temp' may be used uninitialized in this function [-Wmaybe-uninitialized] statistics_observable.cpp: In function 'int observable_update(observable*)': statistics_observable.cpp:49:10: warning: 'temp' may be used uninitialized in this function [-Wmaybe-uninitialized] CXX statistics_wallstuff.lo CXX thermostat.lo CXX topology.lo CXX tuning.lo CXX uwerr.lo CXX verlet.lo CXX virtual_sites.lo CXX virtual_sites_com.lo CXX virtual_sites_relative.lo CXX vmdsock.lo CXX ghmc.lo CXX EspressoSystemInterface.lo CXX bmhtf-nacl.lo CXX buckingham.lo CXX dpd.lo CXX gaussian.lo CXX gb.lo CXX hat.lo CXX hertzian.lo CXX lj.lo CXX ljangle.lo CXX ljcos.lo CXX ljcos2.lo CXX ljgen.lo CXX morse.lo CXX soft_sphere.lo CXX steppot.lo CXX tab.lo CXX tunable_slip.lo CXX angle.lo CXX angle_harmonic.lo CXX angle_cosine.lo CXX angle_cossquare.lo CXX angledist.lo CXX dihedral.lo CXX endangledist.lo CXX fene.lo CXX harmonic.lo CXX overlap.lo CXX subt_lj.lo CXX object-in-fluid/area_force_local.lo CXX object-in-fluid/area_force_global.lo CXX object-in-fluid/bending_force.lo CXX object-in-fluid/stretching_force.lo CXX object-in-fluid/stretchlin_force.lo CXX object-in-fluid/volume_force.lo CXX debye_hueckel.lo CXX elc.lo CXX magnetic_non_p3m_methods.lo CXX mdlc_correction.lo CXX maggs.lo CXX mmm1d.lo CXX mmm2d.lo CXX mmm-common.lo CXX p3m.lo CXX p3m-common.lo CXX p3m-dipolar.lo CXX reaction_field.lo NVCC cuda_init_cuda.lo NVCC cuda_common_cuda.lo NVCC electrokinetics_cuda.lo NVCC lbgpu_cuda.lo lbgpu_cuda.cu(3531): warning: variable "Rho" was declared but never referenced lbgpu_cuda.cu(3531): warning: variable "Rho" was declared but never referenced NVCC p3m_gpu_cuda.lo NVCC EspressoSystemInterface_cuda.lo NVCC HarmonicForce.lo GEN config-version.cpp CXX config-version.lo CXXLD libEspresso.la make[3]: Leaving directory ` Making all in tcl make[3]: Entering directory ` CXX bin_tcl.lo CXX binary_file_tcl.lo CXX blockfile_tcl.lo CXX cells_tcl.lo CXX channels_tcl.lo CXX collision_tcl.lo CXX comfixed_tcl.lo CXX comforce_tcl.lo CXX config_tcl.lo CXX constraint_tcl.lo CXX domain_decomposition_tcl.lo CXX electrokinetics_tcl.lo CXX external_potential_tcl.lo external_potential_tcl.cpp: In function 'int tclcommand_external_potential_tabulated(Tcl_Interp*, int, char**, ExternalPotential*)': external_potential_tcl.cpp:31:7: warning: unused variable 'type' [-Wunused-variable] external_potential_tcl.cpp:32:10: warning: unused variable 'scale' [-Wunused-variable] CXX energy_tcl.lo CXX galilei_tcl.lo CXX global_tcl.lo CXX grid_tcl.lo CXX iccp3m_tcl.lo iccp3m_tcl.cpp: In function 'int tclcommand_iccp3m_parse_normals(Tcl_Interp*, int, char*)': iccp3m_tcl.cpp:191:9: warning: unused variable 'token' [-Wunused-variable] iccp3m_tcl.cpp:192:7: warning: unused variable 'scan_succes' [-Wunused-variable] iccp3m_tcl.cpp:196:14: warning: unused variable 'opening_bracket' [-Wunused-variable] iccp3m_tcl.cpp:197:14: warning: unused variable 'closing_bracket' [-Wunused-variable] iccp3m_tcl.cpp:198:14: warning: unused variable 'space' [-Wunused-variable] iccp3m_tcl.cpp:200:14: warning: unused variable 'delimiters' [-Wunused-variable] CXX imd_tcl.lo CXX initialize_interpreter.lo initialize_interpreter.cpp:27:25: fatal error: cells_tcl.hpp: No such file or directory compilation terminated. make[3]: *** [initialize_interpreter.lo] Error 1 make[3]: Leaving directory ` make[2]: *** [all-recursive] Error 1 make[2]: Leaving directory ` make[1]: *** [all] Error 2 make[1]: Leaving directory ` make: *** [all-recursive] Error 1 + exit 1 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE Archiving artifacts From MAILER-DAEMON Mon May 26 04:03:54 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1Wopsw-0003sc-RC for mharc-espressomd-maintainer@gnu.org; Mon, 26 May 2014 04:03:54 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:52857) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wopsp-0003sV-GV for espressomd-maintainer@nongnu.org; Mon, 26 May 2014 04:03:53 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1Wopsi-0003VK-5L for espressomd-maintainer@nongnu.org; Mon, 26 May 2014 04:03:47 -0400 Received: from charon-out.rus.uni-stuttgart.de ([2001:7c0:2041:25::1:1]:42276 helo=charon.rus.uni-stuttgart.de) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wopsh-0003Ut-Ru for espressomd-maintainer@nongnu.org; Mon, 26 May 2014 04:03:40 -0400 Received: from localhost (localhost [127.0.0.1]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP id 1077E5FE01 for ; Mon, 26 May 2014 10:03:38 +0200 (CEST) X-Virus-Scanned: by amavisd-new at charon.rus.uni-stuttgart.de Received: from charon.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (charon.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id qdjc77Cm2RfS for ; Mon, 26 May 2014 10:03:33 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (icp.uni-stuttgart.de [129.69.120.76]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Mon, 26 May 2014 10:03:33 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 0F31EA40EE for ; Mon, 26 May 2014 10:03:33 +0200 (CEST) Date: Mon, 26 May 2014 10:03:33 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <487270147.29.1401091413054.JavaMail.jenkins@elk> In-Reply-To: <1688480125.28.1401088837975.JavaMail.jenkins@elk> References: <1688480125.28.1401088837975.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-build-check X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2001:7c0:2041:25::1:1 Subject: [Espressomd-maintainer] Build failed in Jenkins: master-build-check #180 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Mon, 26 May 2014 08:03:53 -0000 See Changes: [Olaf Lenz] Updated autotools files. ------------------------------------------ [...truncated 341 lines...] Other settings -------------- config = myconfig.hpp installation prefix = /home/jenkins/Espresso number of test tasks = 8 mympiexec = mpiexec = /usr/lib64/mpi/gcc/openmpi/bin/mpiexec pdflatex = /usr/bin/pdflatex makeindex = /usr/bin/makeindex bibtex = /usr/bin/bibtex doxygen = /usr/bin/doxygen dot = /usr/bin/dot Not building Python interface. END CONFIGURE + maintainer/jenkins/build.sh srcdir= builddir= insource=true START BUILD myconfig=maxset build_procs=1 Copying maxset.hpp to >make -j 1 Making all in config make[1]: Entering directory ` make[1]: Nothing to be done for `all'. make[1]: Leaving directory ` Making all in src make[1]: Entering directory ` GEN myconfig-final.hpp <= ../myconfig.hpp GEN config-features.hpp make all-recursive make[2]: Entering directory ` Making all in . make[3]: Entering directory ` CXX config-features.lo CXX cells.lo CXX collision.lo CXX communication.lo CXX comfixed.lo CXX comforce.lo CXX constraint.lo CXX cuda_interface.lo CXX debug.lo CXX domain_decomposition.lo CXX electrokinetics_pdb_parse.lo CXX energy.lo CXX external_potential.lo external_potential.cpp: In function 'int lattice_read_file(Lattice*, char*)': external_potential.cpp:176:46: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] CXX errorhandling.lo CXX fft.lo CXX fft-common.lo CXX fft-dipolar.lo CXX forcecap.lo CXX forces.lo CXX galilei.lo CXX ghosts.lo CXX global.lo CXX grid.lo CXX halo.lo CXX iccp3m.lo CXX imd.lo CXX initialize.lo CXX integrate.lo CXX interaction_data.lo CXX lattice.lo lattice.cpp: In function 'void _lattice_allocate_memory(Lattice*)': lattice.cpp:101:79: warning: overflow in implicit constant conversion [-Woverflow] lattice.cpp: In function 'void lattice_interpolate_linear_gradient(Lattice*, double*, double*)': lattice.cpp:151:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:156:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:163:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:170:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:177:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:184:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:191:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:198:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:205:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:145:11: warning: unused variable 'w' [-Wunused-variable] lattice.cpp:145:17: warning: unused variable 'wd' [-Wunused-variable] lattice.cpp:146:12: warning: unused variable 'temp_index' [-Wunused-variable] lattice.cpp: In function 'void lattice_interpolate_linear(Lattice*, double*, double*)': lattice.cpp:253:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:260:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] lattice.cpp:234:12: warning: unused variable 'temp_index' [-Wunused-variable] CXX layered.lo CXX lb.lo CXX lb-boundaries.lo CXX lbgpu.lo CXX metadynamics.lo CXX modes.lo CXX molforces.lo CXX mol_cut.lo CXX nemd.lo CXX nsquare.lo CXX particle_data.lo CXX polymer.lo CXX pressure.lo CXX random.lo CXX rattle.lo CXX reaction.lo CXX rotation.lo CXX specfunc.lo CXX statistics.lo CXX statistics_chain.lo CXX statistics_cluster.lo CXX statistics_correlation.lo CXX statistics_fluid.lo CXX statistics_molecule.lo CXX statistics_observable.lo statistics_observable.cpp: In function 'int observable_calc_radial_density_profile(observable*)': statistics_observable.cpp:631:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_radial_flux_density_profile(observable*)': statistics_observable.cpp:683:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_flux_density_profile(observable*)': statistics_observable.cpp:765:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] statistics_observable.cpp: In function 'int observable_calc_particle_positions(observable*)': statistics_observable.cpp:801:16: warning: unused variable 'i' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_calc_particle_forces(observable*)': statistics_observable.cpp:821:16: warning: unused variable 'i' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_reset_average(observable*)': statistics_observable.cpp:885:9: warning: unused variable 'error' [-Wunused-variable] statistics_observable.cpp: In function 'int observable_calculate(observable*)': statistics_observable.cpp:41:10: warning: 'temp' may be used uninitialized in this function [-Wmaybe-uninitialized] statistics_observable.cpp: In function 'int observable_update(observable*)': statistics_observable.cpp:49:10: warning: 'temp' may be used uninitialized in this function [-Wmaybe-uninitialized] CXX statistics_wallstuff.lo CXX thermostat.lo CXX topology.lo CXX tuning.lo CXX uwerr.lo CXX verlet.lo CXX virtual_sites.lo CXX virtual_sites_com.lo CXX virtual_sites_relative.lo CXX vmdsock.lo CXX ghmc.lo CXX EspressoSystemInterface.lo CXX bmhtf-nacl.lo CXX buckingham.lo CXX dpd.lo CXX gaussian.lo CXX gb.lo CXX hat.lo CXX hertzian.lo CXX lj.lo CXX ljangle.lo CXX ljcos.lo CXX ljcos2.lo CXX ljgen.lo CXX morse.lo CXX soft_sphere.lo CXX steppot.lo CXX tab.lo CXX tunable_slip.lo CXX angle.lo CXX angle_harmonic.lo CXX angle_cosine.lo CXX angle_cossquare.lo CXX angledist.lo CXX dihedral.lo CXX endangledist.lo CXX fene.lo CXX harmonic.lo CXX overlap.lo CXX subt_lj.lo CXX object-in-fluid/area_force_local.lo CXX object-in-fluid/area_force_global.lo CXX object-in-fluid/bending_force.lo CXX object-in-fluid/stretching_force.lo CXX object-in-fluid/stretchlin_force.lo CXX object-in-fluid/volume_force.lo CXX debye_hueckel.lo CXX elc.lo CXX magnetic_non_p3m_methods.lo CXX mdlc_correction.lo CXX maggs.lo CXX mmm1d.lo CXX mmm2d.lo CXX mmm-common.lo CXX p3m.lo CXX p3m-common.lo CXX p3m-dipolar.lo CXX reaction_field.lo NVCC cuda_init_cuda.lo NVCC cuda_common_cuda.lo NVCC electrokinetics_cuda.lo NVCC lbgpu_cuda.lo lbgpu_cuda.cu(3531): warning: variable "Rho" was declared but never referenced lbgpu_cuda.cu(3531): warning: variable "Rho" was declared but never referenced NVCC p3m_gpu_cuda.lo NVCC EspressoSystemInterface_cuda.lo NVCC HarmonicForce.lo GEN config-version.cpp CXX config-version.lo CXXLD libEspresso.la make[3]: Leaving directory ` Making all in tcl make[3]: Entering directory ` CXX bin_tcl.lo CXX binary_file_tcl.lo CXX blockfile_tcl.lo CXX cells_tcl.lo CXX channels_tcl.lo CXX collision_tcl.lo CXX comfixed_tcl.lo CXX comforce_tcl.lo CXX config_tcl.lo CXX constraint_tcl.lo CXX domain_decomposition_tcl.lo CXX electrokinetics_tcl.lo CXX external_potential_tcl.lo external_potential_tcl.cpp: In function 'int tclcommand_external_potential_tabulated(Tcl_Interp*, int, char**, ExternalPotential*)': external_potential_tcl.cpp:31:7: warning: unused variable 'type' [-Wunused-variable] external_potential_tcl.cpp:32:10: warning: unused variable 'scale' [-Wunused-variable] CXX energy_tcl.lo CXX galilei_tcl.lo CXX global_tcl.lo CXX grid_tcl.lo CXX iccp3m_tcl.lo iccp3m_tcl.cpp: In function 'int tclcommand_iccp3m_parse_normals(Tcl_Interp*, int, char*)': iccp3m_tcl.cpp:191:9: warning: unused variable 'token' [-Wunused-variable] iccp3m_tcl.cpp:192:7: warning: unused variable 'scan_succes' [-Wunused-variable] iccp3m_tcl.cpp:196:14: warning: unused variable 'opening_bracket' [-Wunused-variable] iccp3m_tcl.cpp:197:14: warning: unused variable 'closing_bracket' [-Wunused-variable] iccp3m_tcl.cpp:198:14: warning: unused variable 'space' [-Wunused-variable] iccp3m_tcl.cpp:200:14: warning: unused variable 'delimiters' [-Wunused-variable] CXX imd_tcl.lo CXX initialize_interpreter.lo initialize_interpreter.cpp:27:25: fatal error: cells_tcl.hpp: No such file or directory compilation terminated. make[3]: *** [initialize_interpreter.lo] Error 1 make[3]: Leaving directory ` make[2]: *** [all-recursive] Error 1 make[2]: Leaving directory ` make[1]: *** [all] Error 2 make[1]: Leaving directory ` make: *** [all-recursive] Error 1 + exit 1 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE Archiving artifacts From MAILER-DAEMON Mon May 26 05:04:19 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WoqpP-0006rj-IV for mharc-espressomd-maintainer@gnu.org; Mon, 26 May 2014 05:04:19 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:40096) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WoqpH-0006q6-Lg for espressomd-maintainer@nongnu.org; Mon, 26 May 2014 05:04:18 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1Woqp9-00009l-6V for espressomd-maintainer@nongnu.org; Mon, 26 May 2014 05:04:11 -0400 Received: from medousa.rus.uni-stuttgart.de ([129.69.192.4]:51078) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Woqp9-00009R-0w for espressomd-maintainer@nongnu.org; Mon, 26 May 2014 05:04:03 -0400 Received: from localhost (localhost [127.0.0.1]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP id 437AF3802C for ; Mon, 26 May 2014 11:04:01 +0200 (CEST) X-Virus-Scanned: by amavisd-new at medousa.rus.uni-stuttgart.de Received: from medousa.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (medousa.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id teOIIWSkq3ft for ; Mon, 26 May 2014 11:03:56 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (icp.uni-stuttgart.de [129.69.120.76]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Mon, 26 May 2014 11:03:56 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id B8366A40EE for ; Mon, 26 May 2014 11:03:56 +0200 (CEST) Date: Mon, 26 May 2014 11:03:56 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1047797164.30.1401095036721.JavaMail.jenkins@elk> In-Reply-To: <487270147.29.1401091413054.JavaMail.jenkins@elk> References: <487270147.29.1401091413054.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-build-check X-Jenkins-Result: SUCCESS X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.4 Subject: [Espressomd-maintainer] Jenkins build is back to normal : master-build-check #181 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Mon, 26 May 2014 09:04:18 -0000 See From MAILER-DAEMON Mon May 26 18:54:42 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1Wp3n0-00089X-Ip for mharc-espressomd-maintainer@gnu.org; Mon, 26 May 2014 18:54:42 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:53220) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wp3ms-00080f-Mh for espressomd-maintainer@nongnu.org; Mon, 26 May 2014 18:54:41 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1Wp3ml-0001dm-Vf for espressomd-maintainer@nongnu.org; Mon, 26 May 2014 18:54:34 -0400 Received: from medousa-out.rus.uni-stuttgart.de ([2001:7c0:2041:25::1:4]:42263 helo=medousa.rus.uni-stuttgart.de) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wp3ml-0001d3-LE for espressomd-maintainer@nongnu.org; Mon, 26 May 2014 18:54:27 -0400 Received: from localhost (localhost [127.0.0.1]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP id 59CF738081 for ; Tue, 27 May 2014 00:54:19 +0200 (CEST) X-Virus-Scanned: by amavisd-new at medousa.rus.uni-stuttgart.de Received: from medousa.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (medousa.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id dBJ2tJoPwJdF for ; Tue, 27 May 2014 00:54:14 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (anoa.icp.uni-stuttgart.de [129.69.120.76]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Tue, 27 May 2014 00:54:14 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 80398A40EE for ; Tue, 27 May 2014 00:54:14 +0200 (CEST) Date: Tue, 27 May 2014 00:54:14 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <563636264.31.1401144854431.JavaMail.jenkins@elk> In-Reply-To: <1227700939.21.1401058440797.JavaMail.jenkins@elk> References: <1227700939.21.1401058440797.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-nightly-distcheck X-Jenkins-Result: FAILURE X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2001:7c0:2041:25::1:4 Subject: [Espressomd-maintainer] Build failed in Jenkins: master-nightly-distcheck #86 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Mon, 26 May 2014 22:54:41 -0000 See Changes: [Olaf Lenz] Add derived features to code_info. ------------------------------------------ [...truncated 883 lines...] Cuda ---- CUDA compiler = /usr/local/cuda/bin/nvcc CUDA flags = --ptxas-options=-v -gencode arch=compute_20,code=compute_20 Tcl/Tk ------ Tcl version = tcl8.5 Tk version = none Python ------ python = /usr/local/bin/python -B build python interface = no Other settings -------------- config = myconfig.hpp installation prefix = number of test tasks = 8 mympiexec = mpiexec = /usr/lib64/mpi/gcc/openmpi/bin/mpiexec pdflatex = /usr/bin/pdflatex makeindex = /usr/bin/makeindex bibtex = /usr/bin/bibtex doxygen = /usr/bin/doxygen dot = /usr/bin/dot Not building Python interface. make[1]: Entering directory ` Making all in config make[2]: Entering directory ` make[2]: Nothing to be done for `all'. make[2]: Leaving directory ` Making all in src make[2]: Entering directory ` GEN myconfig-final.hpp <= ../../src/myconfig-default.hpp make all-recursive make[3]: Entering directory ` Making all in . make[4]: Entering directory ` CXX config-features.lo CXX cells.lo CXX collision.lo CXX communication.lo CXX comfixed.lo CXX comforce.lo CXX constraint.lo CXX cuda_interface.lo CXX debug.lo CXX domain_decomposition.lo CXX electrokinetics_pdb_parse.lo CXX energy.lo CXX external_potential.lo ../../src/external_potential.cpp: In function 'int lattice_read_file(Lattice*, char*)': ../../src/external_potential.cpp:176:46: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings] CXX errorhandling.lo CXX fft.lo CXX fft-common.lo CXX fft-dipolar.lo CXX forcecap.lo CXX forces.lo CXX galilei.lo CXX ghosts.lo CXX global.lo CXX grid.lo CXX halo.lo CXX iccp3m.lo CXX imd.lo CXX initialize.lo CXX integrate.lo CXX interaction_data.lo CXX lattice.lo ../../src/lattice.cpp: In function 'void _lattice_allocate_memory(Lattice*)': ../../src/lattice.cpp:101:79: warning: overflow in implicit constant conversion [-Woverflow] ../../src/lattice.cpp: In function 'void lattice_interpolate_linear_gradient(Lattice*, double*, double*)': ../../src/lattice.cpp:151:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/lattice.cpp:156:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/lattice.cpp:163:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/lattice.cpp:170:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/lattice.cpp:177:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/lattice.cpp:184:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/lattice.cpp:191:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/lattice.cpp:198:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/lattice.cpp:205:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/lattice.cpp:145:11: warning: unused variable 'w' [-Wunused-variable] ../../src/lattice.cpp:145:17: warning: unused variable 'wd' [-Wunused-variable] ../../src/lattice.cpp:146:12: warning: unused variable 'temp_index' [-Wunused-variable] ../../src/lattice.cpp: In function 'void lattice_interpolate_linear(Lattice*, double*, double*)': ../../src/lattice.cpp:253:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/lattice.cpp:260:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/lattice.cpp:234:12: warning: unused variable 'temp_index' [-Wunused-variable] CXX layered.lo CXX lb.lo CXX lb-boundaries.lo CXX lbgpu.lo CXX metadynamics.lo CXX modes.lo CXX molforces.lo CXX mol_cut.lo CXX nemd.lo CXX nsquare.lo CXX particle_data.lo CXX polymer.lo CXX pressure.lo CXX random.lo CXX rattle.lo CXX reaction.lo CXX rotation.lo CXX specfunc.lo CXX statistics.lo CXX statistics_chain.lo CXX statistics_cluster.lo CXX statistics_correlation.lo CXX statistics_fluid.lo CXX statistics_molecule.lo CXX statistics_observable.lo ../../src/statistics_observable.cpp: In function 'int observable_calc_radial_density_profile(observable*)': ../../src/statistics_observable.cpp:631:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/statistics_observable.cpp: In function 'int observable_calc_radial_flux_density_profile(observable*)': ../../src/statistics_observable.cpp:683:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/statistics_observable.cpp: In function 'int observable_calc_flux_density_profile(observable*)': ../../src/statistics_observable.cpp:765:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] ../../src/statistics_observable.cpp: In function 'int observable_calc_particle_positions(observable*)': ../../src/statistics_observable.cpp:801:16: warning: unused variable 'i' [-Wunused-variable] ../../src/statistics_observable.cpp: In function 'int observable_calc_particle_forces(observable*)': ../../src/statistics_observable.cpp:821:16: warning: unused variable 'i' [-Wunused-variable] ../../src/statistics_observable.cpp: In function 'int observable_reset_average(observable*)': ../../src/statistics_observable.cpp:885:9: warning: unused variable 'error' [-Wunused-variable] ../../src/statistics_observable.cpp: In function 'int observable_calculate(observable*)': ../../src/statistics_observable.cpp:41:10: warning: 'temp' may be used uninitialized in this function [-Wmaybe-uninitialized] ../../src/statistics_observable.cpp: In function 'int observable_update(observable*)': ../../src/statistics_observable.cpp:49:10: warning: 'temp' may be used uninitialized in this function [-Wmaybe-uninitialized] CXX statistics_wallstuff.lo CXX thermostat.lo CXX topology.lo CXX tuning.lo CXX uwerr.lo CXX verlet.lo CXX virtual_sites.lo CXX virtual_sites_com.lo CXX virtual_sites_relative.lo CXX vmdsock.lo CXX ghmc.lo CXX EspressoSystemInterface.lo CXX bmhtf-nacl.lo CXX buckingham.lo CXX dpd.lo CXX gaussian.lo CXX gb.lo CXX hat.lo CXX hertzian.lo CXX lj.lo CXX ljangle.lo CXX ljcos.lo CXX ljcos2.lo CXX ljgen.lo CXX morse.lo CXX soft_sphere.lo CXX steppot.lo CXX tab.lo CXX tunable_slip.lo CXX angle.lo CXX angle_harmonic.lo CXX angle_cosine.lo CXX angle_cossquare.lo CXX angledist.lo CXX dihedral.lo CXX endangledist.lo CXX fene.lo CXX harmonic.lo CXX overlap.lo CXX subt_lj.lo CXX object-in-fluid/area_force_local.lo CXX object-in-fluid/area_force_global.lo CXX object-in-fluid/bending_force.lo CXX object-in-fluid/stretching_force.lo CXX object-in-fluid/stretchlin_force.lo CXX object-in-fluid/volume_force.lo CXX debye_hueckel.lo CXX elc.lo CXX magnetic_non_p3m_methods.lo CXX mdlc_correction.lo CXX maggs.lo CXX mmm1d.lo CXX mmm2d.lo CXX mmm-common.lo CXX p3m.lo CXX p3m-common.lo CXX p3m-dipolar.lo CXX reaction_field.lo NVCC cuda_init_cuda.lo NVCC cuda_common_cuda.lo NVCC electrokinetics_cuda.lo NVCC lbgpu_cuda.lo NVCC p3m_gpu_cuda.lo NVCC EspressoSystemInterface_cuda.lo NVCC HarmonicForce.lo GEN config-version.cpp CXX config-version.lo CXXLD libEspresso.la make[4]: Leaving directory ` Making all in tcl make[4]: Entering directory ` CXX bin_tcl.lo CXX binary_file_tcl.lo CXX blockfile_tcl.lo CXX cells_tcl.lo CXX channels_tcl.lo CXX collision_tcl.lo CXX comfixed_tcl.lo CXX comforce_tcl.lo CXX config_tcl.lo CXX constraint_tcl.lo CXX domain_decomposition_tcl.lo CXX electrokinetics_tcl.lo CXX external_potential_tcl.lo ../../../src/tcl/external_potential_tcl.cpp: In function 'int tclcommand_external_potential_tabulated(Tcl_Interp*, int, char**, ExternalPotential*)': ../../../src/tcl/external_potential_tcl.cpp:31:7: warning: unused variable 'type' [-Wunused-variable] ../../../src/tcl/external_potential_tcl.cpp:32:10: warning: unused variable 'scale' [-Wunused-variable] CXX energy_tcl.lo CXX galilei_tcl.lo CXX global_tcl.lo CXX grid_tcl.lo CXX iccp3m_tcl.lo ../../../src/tcl/iccp3m_tcl.cpp: In function 'int tclcommand_iccp3m_parse_normals(Tcl_Interp*, int, char*)': ../../../src/tcl/iccp3m_tcl.cpp:191:9: warning: unused variable 'token' [-Wunused-variable] ../../../src/tcl/iccp3m_tcl.cpp:192:7: warning: unused variable 'scan_succes' [-Wunused-variable] ../../../src/tcl/iccp3m_tcl.cpp:196:14: warning: unused variable 'opening_bracket' [-Wunused-variable] ../../../src/tcl/iccp3m_tcl.cpp:197:14: warning: unused variable 'closing_bracket' [-Wunused-variable] ../../../src/tcl/iccp3m_tcl.cpp:198:14: warning: unused variable 'space' [-Wunused-variable] ../../../src/tcl/iccp3m_tcl.cpp:200:14: warning: unused variable 'delimiters' [-Wunused-variable] CXX imd_tcl.lo CXX initialize_interpreter.lo ../../../src/tcl/initialize_interpreter.cpp:27:25: fatal error: cells_tcl.hpp: No such file or directory compilation terminated. make[4]: *** [initialize_interpreter.lo] Error 1 make[4]: Leaving directory ` make[3]: *** [all-recursive] Error 1 make[3]: Leaving directory ` make[2]: *** [all] Error 2 make[2]: Leaving directory ` make[1]: *** [all-recursive] Error 1 make[1]: Leaving directory ` make: *** [distcheck] Error 1 + exit 1 Build step 'Execute shell' marked build as failure [WARNINGS] Skipping publisher since build result is FAILURE Archiving artifacts From MAILER-DAEMON Mon May 26 20:03:10 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1Wp4rG-0000OU-6L for mharc-espressomd-maintainer@gnu.org; Mon, 26 May 2014 20:03:10 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:41903) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wp4r7-0000N7-Ka for espressomd-maintainer@nongnu.org; Mon, 26 May 2014 20:03:08 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1Wp4r0-0007OE-NN for espressomd-maintainer@nongnu.org; Mon, 26 May 2014 20:03:01 -0400 Received: from medousa-out.rus.uni-stuttgart.de ([2001:7c0:2041:25::1:4]:47258 helo=medousa.rus.uni-stuttgart.de) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wp4r0-0007Nj-H8 for espressomd-maintainer@nongnu.org; Mon, 26 May 2014 20:02:54 -0400 Received: from localhost (localhost [127.0.0.1]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP id CF69F3809A for ; Tue, 27 May 2014 02:02:52 +0200 (CEST) X-Virus-Scanned: by amavisd-new at medousa.rus.uni-stuttgart.de Received: from medousa.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (medousa.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id y6p01UaTDGA7 for ; Tue, 27 May 2014 02:02:48 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (anoa.icp.uni-stuttgart.de [129.69.120.76]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Tue, 27 May 2014 02:02:48 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 5CB7EA40EE for ; Tue, 27 May 2014 02:02:48 +0200 (CEST) Date: Tue, 27 May 2014 02:02:48 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1144153363.32.1401148968298.JavaMail.jenkins@elk> In-Reply-To: <1240704795.22.1401062438834.JavaMail.jenkins@elk> References: <1240704795.22.1401062438834.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-nightly-nocuda-nofftw X-Jenkins-Result: SUCCESS X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2001:7c0:2041:25::1:4 Subject: [Espressomd-maintainer] Jenkins build is back to normal : master-nightly-nocuda-nofftw #82 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Tue, 27 May 2014 00:03:08 -0000 See From MAILER-DAEMON Mon May 26 21:42:26 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1Wp6PK-0006lf-Id for mharc-espressomd-maintainer@gnu.org; Mon, 26 May 2014 21:42:26 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:35334) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wp6PB-0006UG-QR for espressomd-maintainer@nongnu.org; Mon, 26 May 2014 21:42:24 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1Wp6P4-0005W4-TG for espressomd-maintainer@nongnu.org; Mon, 26 May 2014 21:42:17 -0400 Received: from charon-out.rus.uni-stuttgart.de ([2001:7c0:2041:25::1:1]:57219 helo=charon.rus.uni-stuttgart.de) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wp6P4-0005Uu-GO for espressomd-maintainer@nongnu.org; Mon, 26 May 2014 21:42:10 -0400 Received: from localhost (localhost [127.0.0.1]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP id E9AFF5FF13 for ; Tue, 27 May 2014 03:42:08 +0200 (CEST) X-Virus-Scanned: by amavisd-new at charon.rus.uni-stuttgart.de Received: from charon.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (charon.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id 9s3mdVA0OpbG for ; Tue, 27 May 2014 03:42:04 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (anoa.icp.uni-stuttgart.de [129.69.120.76]) by charon.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Tue, 27 May 2014 03:42:04 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 74A2FA40EE for ; Tue, 27 May 2014 03:42:04 +0200 (CEST) Date: Tue, 27 May 2014 03:42:04 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1318921339.33.1401154924389.JavaMail.jenkins@elk> In-Reply-To: <1923192109.23.1401068367811.JavaMail.jenkins@elk> References: <1923192109.23.1401068367811.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-nightly-mpich X-Jenkins-Result: SUCCESS X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2001:7c0:2041:25::1:1 Subject: [Espressomd-maintainer] Jenkins build is back to normal : master-nightly-mpich #80 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Tue, 27 May 2014 01:42:25 -0000 See From MAILER-DAEMON Mon May 26 22:07:37 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1Wp6nh-0007IM-3f for mharc-espressomd-maintainer@gnu.org; Mon, 26 May 2014 22:07:37 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:42197) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wp6nZ-0007IC-JJ for espressomd-maintainer@nongnu.org; Mon, 26 May 2014 22:07:36 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1Wp6nS-0005lh-QU for espressomd-maintainer@nongnu.org; Mon, 26 May 2014 22:07:29 -0400 Received: from charon.rus.uni-stuttgart.de ([129.69.192.1]:56895) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wp6nS-0005la-K6 for espressomd-maintainer@nongnu.org; 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charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-nightly-debug X-Jenkins-Result: SUCCESS X-detected-operating-system: by eggs.gnu.org: GNU/Linux 3.x X-Received-From: 129.69.192.1 Subject: [Espressomd-maintainer] Jenkins build is back to normal : master-nightly-debug #77 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Tue, 27 May 2014 02:07:36 -0000 See From MAILER-DAEMON Mon May 26 22:13:51 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1Wp6tj-0001Ge-Bo for mharc-espressomd-maintainer@gnu.org; Mon, 26 May 2014 22:13:51 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:43226) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wp6tb-0001GP-FB for espressomd-maintainer@nongnu.org; Mon, 26 May 2014 22:13:50 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1Wp6tU-0007Ve-GU for espressomd-maintainer@nongnu.org; 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Tue, 27 May 2014 04:13:30 +0200 (CEST) Date: Tue, 27 May 2014 04:13:30 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <920484139.35.1401156810605.JavaMail.jenkins@elk> In-Reply-To: <1908675915.26.1401070373269.JavaMail.jenkins@elk> References: <1908675915.26.1401070373269.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: default,nompi X-Jenkins-Result: SUCCESS X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). 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X-Received-From: 2001:7c0:2041:25::1:1 Subject: [Espressomd-maintainer] =?utf-8?q?Jenkins_build_is_back_to_normal?= =?utf-8?q?_=3A_master-nightly-multiconfig_=C2=BB_default=2C4core_=2395?= X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Tue, 27 May 2014 02:15:02 -0000 See From MAILER-DAEMON Wed May 28 18:58:01 2014 Received: from list by lists.gnu.org with archive (Exim 4.71) id 1WpmnJ-0000zF-It for mharc-espressomd-maintainer@gnu.org; Wed, 28 May 2014 18:58:01 -0400 Received: from eggs.gnu.org ([2001:4830:134:3::10]:35398) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1WpmnA-0000yw-OF for espressomd-maintainer@nongnu.org; Wed, 28 May 2014 18:57:59 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1Wpmmy-00065t-8a for espressomd-maintainer@nongnu.org; Wed, 28 May 2014 18:57:52 -0400 Received: from medousa-out.rus.uni-stuttgart.de ([2001:7c0:2041:25::1:4]:40447 helo=medousa.rus.uni-stuttgart.de) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Wpmmy-00064a-1i for espressomd-maintainer@nongnu.org; Wed, 28 May 2014 18:57:40 -0400 Received: from localhost (localhost [127.0.0.1]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP id 959E637FB3 for ; Thu, 29 May 2014 00:57:30 +0200 (CEST) X-Virus-Scanned: by amavisd-new at medousa.rus.uni-stuttgart.de Received: from medousa.rus.uni-stuttgart.de ([127.0.0.1]) by localhost (medousa.rus.uni-stuttgart.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id zdwpgp3WOJOf for ; Thu, 29 May 2014 00:57:26 +0200 (CEST) Received: from anoa.icp.uni-stuttgart.de (anoa.icp.uni-stuttgart.de [129.69.120.76]) by medousa.rus.uni-stuttgart.de (Postfix) with ESMTP for ; Thu, 29 May 2014 00:57:26 +0200 (CEST) Received: from elk.icp.uni-stuttgart.de (elk.icp.uni-stuttgart.de [129.69.120.50]) by anoa.icp.uni-stuttgart.de (Postfix) with ESMTP id 1C60EA40EE for ; Thu, 29 May 2014 00:57:26 +0200 (CEST) Date: Thu, 29 May 2014 00:57:25 +0200 (CEST) From: Jenkins Demon To: espressomd-maintainer@nongnu.org Message-ID: <1587230575.0.1401317846042.JavaMail.jenkins@elk> In-Reply-To: <563636264.31.1401144854431.JavaMail.jenkins@elk> References: <563636264.31.1401144854431.JavaMail.jenkins@elk> MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Jenkins-Job: master-nightly-distcheck X-Jenkins-Result: SUCCESS X-detected-operating-system: by eggs.gnu.org: Error: Malformed IPv6 address (bad octet value). X-Received-From: 2001:7c0:2041:25::1:4 Subject: [Espressomd-maintainer] Jenkins build is back to normal : master-nightly-distcheck #87 X-BeenThere: espressomd-maintainer@nongnu.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Maintainer list of ESPResSo List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Wed, 28 May 2014 22:58:00 -0000 See