bug#55127: closed ([PATCH] gnu: Add r-adsplit.)

[GNU bug Tracking System]

Your message dated Wed, 27 Apr 2022 16:09:53 +0200
with message-id <87o80m4ny6.fsf@elephly.net>
and subject line Re: [bug#55127] [PATCH] gnu: Add r-adsplit.
has caused the debbugs.gnu.org bug report #55127,
regarding [PATCH] gnu: Add r-adsplit.
to be marked as done.

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-- 
55127: https://debbugs.gnu.org/cgi/bugreport.cgi?bug=55127
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> --- Begin Message ---
>
>
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> Subject: 
>
> [PATCH] gnu: Add r-adsplit.
>
>
>
>
> Date: 
>
> Tue, 26 Apr 2022 16:07:09 +0200
>
>
>
>
> * gnu/packages/bioconductor.scm (r-adsplit): New variable.
> ---
>  gnu/packages/bioconductor.scm | 27 +++++++++++++++++++++++++++
>  1 file changed, 27 insertions(+)
>
> diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
> index fa862d736f..f0a7359590 100644
> --- a/gnu/packages/bioconductor.scm
> +++ b/gnu/packages/bioconductor.scm
> @@ -1616,6 +1616,33 @@ (define-public r-adam
>  functionally associated genes} (GFAG).")
>      (license license:gpl2+)))
>  
> +(define-public r-adsplit
> +  (package
> +    (name "r-adsplit")
> +    (version "1.64.0")
> +    (source (origin
> +              (method url-fetch)
> +              (uri (bioconductor-uri "adSplit" version))
> +              (sha256
> +               (base32
> +                "1b4ck371h3a76m5h0brvlzsyg1g6q5fjrhra5hqv9pwxr330h9r2"))))
> +    (properties `((upstream-name . "adSplit")))
> +    (build-system r-build-system)
> +    (propagated-inputs (list r-annotationdbi
> +                             r-biobase
> +                             r-cluster
> +                             r-go-db
> +                             r-keggrest
> +                             r-multtest))
> +    (home-page "http://compdiag.molgen.mpg.de/software/adSplit.shtml";)
> +    (synopsis "Annotation-driven splits in microarray data")
> +    (description
> +     "This package implements clustering of microarray gene expression profiles
> +according to functional annotations.  For each term genes are annotated to,
> +splits into two subclasses are computed and a significance of the supporting
> +gene set is determined.")
> +    (license license:gpl2+)))
> +
>  (define-public r-aneufinder
>    (package
>      (name "r-aneufinder")
>
> base-commit: 30ff557bd7255dddec16f4a032e58f5a88d5e448
> -- 
> 2.34.0
>
>
>
>
> --- End Message ---
> --- Begin Message ---
>
>
>
> Subject: 
>
> Re: [bug#55127] [PATCH] gnu: Add r-adsplit.
>
>
>
>
> Date: 
>
> Wed, 27 Apr 2022 16:09:53 +0200
>
>
>
>
> User-agent: 
>
> mu4e 1.6.10; emacs 28.0.50
>
>
>
>
> Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de> writes:
>
> > * gnu/packages/bioconductor.scm (r-adsplit): New variable.
>
> Applied with stylistic changes.  Thank you!
>
> -- 
> Ricardo
>
>
> --- End Message ---