[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]
[bug#47171] [PATCH 07/10] gnu: r-biocparallel: Move to (gnu packages bio
From: |
zimoun |
Subject: |
[bug#47171] [PATCH 07/10] gnu: r-biocparallel: Move to (gnu packages bioconductor). |
Date: |
Mon, 15 Mar 2021 19:09:01 +0100 |
* gnu/packages/bioinformatics.scm (r-biocparallel): Move from here...
* gnu/packages/bioconductor.scm (r-biocparallel): ...to here.
---
gnu/packages/bioconductor.scm | 27 +++++++++++++++++++++++++++
gnu/packages/bioinformatics.scm | 27 ---------------------------
2 files changed, 27 insertions(+), 27 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 897e85dfe3..6482d8e4c1 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -1659,6 +1659,33 @@ users direct access to a diverse set of data and enable
a wide range of
powerful online queries from gene annotation to database mining.")
(license license:artistic2.0)))
+(define-public r-biocparallel
+ (package
+ (name "r-biocparallel")
+ (version "1.24.1")
+ (source (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "BiocParallel" version))
+ (sha256
+ (base32
+ "1iryicvmcagcrj29kp49mqhiq2kn72j4idj380hi9illmdrg9ism"))))
+ (properties
+ `((upstream-name . "BiocParallel")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-futile-logger" ,r-futile-logger)
+ ("r-snow" ,r-snow)
+ ("r-bh" ,r-bh)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
+ (home-page "https://bioconductor.org/packages/BiocParallel")
+ (synopsis "Bioconductor facilities for parallel evaluation")
+ (description
+ "This package provides modified versions and novel implementation of
+functions for parallel evaluation, tailored to use with Bioconductor
+objects.")
+ (license (list license:gpl2+ license:gpl3+))))
+
(define-public r-category
(package
(name "r-category")
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 289a96f572..af3fa36b19 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -7691,33 +7691,6 @@ including VCF header and contents in RDF and JSON.")
(home-page "https://github.com/vcflib/bio-vcf")
(license license:expat)))
-(define-public r-biocparallel
- (package
- (name "r-biocparallel")
- (version "1.24.1")
- (source (origin
- (method url-fetch)
- (uri (bioconductor-uri "BiocParallel" version))
- (sha256
- (base32
- "1iryicvmcagcrj29kp49mqhiq2kn72j4idj380hi9illmdrg9ism"))))
- (properties
- `((upstream-name . "BiocParallel")))
- (build-system r-build-system)
- (propagated-inputs
- `(("r-futile-logger" ,r-futile-logger)
- ("r-snow" ,r-snow)
- ("r-bh" ,r-bh)))
- (native-inputs
- `(("r-knitr" ,r-knitr)))
- (home-page "https://bioconductor.org/packages/BiocParallel")
- (synopsis "Bioconductor facilities for parallel evaluation")
- (description
- "This package provides modified versions and novel implementation of
-functions for parallel evaluation, tailored to use with Bioconductor
-objects.")
- (license (list license:gpl2+ license:gpl3+))))
-
(define-public r-biostrings
(package
(name "r-biostrings")
--
2.30.1
- [bug#47171] [PATCH 00/10] Move some Bioconductor packages to (gnu packages bioconductor)., zimoun, 2021/03/15
- [bug#47171] [PATCH 01/10] gnu: r-limma: Move to (gnu packages bioconductor)., zimoun, 2021/03/15
- [bug#47171] [PATCH 03/10] gnu: r-genomicranges: Move to (gnu packages bioconductor)., zimoun, 2021/03/15
- [bug#47171] [PATCH 02/10] gnu: r-xvector: Move to (gnu packages bioconductor)., zimoun, 2021/03/15
- [bug#47171] [PATCH 04/10] gnu: r-biobase: Move to (gnu packages bioconductor)., zimoun, 2021/03/15
- [bug#47171] [PATCH 08/10] gnu: r-biostrings: Move to (gnu packages bioconductor)., zimoun, 2021/03/15
- [bug#47171] [PATCH 10/10] gnu: r-delayedarray: Move to (gnu packages bioconductor)., zimoun, 2021/03/15
- [bug#47171] [PATCH 09/10] gnu: r-rsamtools: Move to (gnu packages bioconductor)., zimoun, 2021/03/15
- [bug#47171] [PATCH 05/10] gnu: r-annotationdbi: Move to (gnu packages bioconductor)., zimoun, 2021/03/15
- [bug#47171] [PATCH 06/10] gnu: r-biomart: Move to (gnu packages bioconductor)., zimoun, 2021/03/15
- [bug#47171] [PATCH 07/10] gnu: r-biocparallel: Move to (gnu packages bioconductor).,
zimoun <=
- bug#47171: [PATCH 00/10] Move some Bioconductor packages to (gnu packages bioconductor)., Ricardo Wurmus, 2021/03/15
- [bug#47171] [PATCH 00/10] Move some Bioconductor packages to (gnu packages bioconductor)., Leo Famulari, 2021/03/15
- [bug#47171] [PATCH 00/10] Move some Bioconductor packages to (gnu packages bioconductor)., zimoun, 2021/03/16
- [bug#47171] [PATCH 00/10] Move some Bioconductor packages to (gnu packages bioconductor)., Ricardo Wurmus, 2021/03/16
- [bug#47171] [PATCH 00/10] Move some Bioconductor packages to (gnu packages bioconductor)., zimoun, 2021/03/16
- [bug#47171] [PATCH 00/10] Move some Bioconductor packages to (gnu packages bioconductor)., Ricardo Wurmus, 2021/03/16
- [bug#47171] [PATCH 00/10] Move some Bioconductor packages to (gnu packages bioconductor)., zimoun, 2021/03/16
- [bug#47171] [PATCH 00/10] Move some Bioconductor packages to (gnu packages bioconductor)., Ricardo Wurmus, 2021/03/16
- [bug#47171] [PATCH 00/10] Move some Bioconductor packages to (gnu packages bioconductor)., zimoun, 2021/03/17
[bug#47171] [PATCH v2 1/3] gnu: r-bisquerna: Move to (gnu packages bioconductor)., zimoun, 2021/03/17