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[bug#61220] [PATCH 01/10] gnu: Add r-glad.
From: |
Mădălin Ionel Patrașcu |
Subject: |
[bug#61220] [PATCH 01/10] gnu: Add r-glad. |
Date: |
Thu, 2 Feb 2023 03:26:48 +0100 |
* gnu/packages/bioconductor.scm (r-glad): New variable.
---
gnu/packages/bioconductor.scm | 25 +++++++++++++++++++++++++
1 file changed, 25 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 711b988e7f..451dcfde86 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -6122,6 +6122,31 @@ (define-public r-genomicranges
manipulating genomic intervals and variables defined along a genome.")
(license license:artistic2.0)))
+(define-public r-glad
+ (package
+ (name "r-glad")
+ (version "2.62.0")
+ (source (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "GLAD" version))
+ (sha256
+ (base32
+ "0gb52ic5r6nkgm2ynm174vcvbmkbhhjgv71lsmxpxzcsb6rr7qj6"))))
+ (properties `((upstream-name . "GLAD")))
+ (build-system r-build-system)
+ (propagated-inputs
+ (list gsl
+ r-aws))
+ (native-inputs (list pkg-config))
+ (home-page "http://bioinfo.curie.fr")
+ (synopsis "Gain and loss analysis of DNA")
+ (description
+ "This package helps with the analysis of array @acronym{CGH, comparative
+genomic hybridization} data by detecting of the breakpoints in the genomic
profiles
+and assignment of a status (gain, normal or loss) to each chromosomal regions
+identified.")
+ (license license:gpl2)))
+
(define-public r-gostats
(package
(name "r-gostats")
base-commit: 6564a04efaf506a5ef51a7c100144fa31bbe1f31
--
2.39.1
- [bug#61220] [patch] gnu: Add r-glad, r-italicsdata, r-pd-mapping50k-xba240, r-italics, r-manor, r-tilingarray, r-snapcgh, r-quantsmooth, r-beadarraysnp and r-adacgh2., address@hidden, 2023/02/01
- [bug#61220] [PATCH 01/10] gnu: Add r-glad.,
Mădălin Ionel Patrașcu <=
- [bug#61220] [PATCH 03/10] gnu: Add r-pd-mapping50k-xba240., Mădălin Ionel Patrașcu, 2023/02/01
- [bug#61220] [PATCH 07/10] gnu: Add r-snapcgh., Mădălin Ionel Patrașcu, 2023/02/01
- [bug#61220] [PATCH 04/10] gnu: Add r-italics., Mădălin Ionel Patrașcu, 2023/02/01
- [bug#61220] [PATCH 02/10] gnu: Add r-italicsdata., Mădălin Ionel Patrașcu, 2023/02/01
- [bug#61220] [PATCH 09/10] gnu: Add r-beadarraysnp., Mădălin Ionel Patrașcu, 2023/02/01
- [bug#61220] [PATCH 06/10] gnu: Add r-tilingarray., Mădălin Ionel Patrașcu, 2023/02/01
- [bug#61220] [PATCH 10/10] gnu: Add r-adacgh2., Mădălin Ionel Patrașcu, 2023/02/01
- [bug#61220] [PATCH 05/10] gnu: Add r-manor., Mădălin Ionel Patrașcu, 2023/02/01
- [bug#61220] [PATCH 08/10] gnu: Add r-quantsmooth., Mădălin Ionel Patrașcu, 2023/02/01