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[bug#63542] [PATCH v2 13/20] gnu: python-pynbody: Update to 1.3.1, simpl
From: |
Sharlatan Hellseher |
Subject: |
[bug#63542] [PATCH v2 13/20] gnu: python-pynbody: Update to 1.3.1, simplify. |
Date: |
Wed, 24 May 2023 22:51:47 +0100 |
* gnu/packages/astronomy.scm (python-pynbody): Update to 1.3.1, simplify
package.
[build-system]: Shift to pyproject-build-system.
[arguments]: Do not modify standard phases, use #:test-flags instead.
---
gnu/packages/astronomy.scm | 77 +++++++++++++++++---------------------
1 file changed, 34 insertions(+), 43 deletions(-)
diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm
index c74867948f..011e1374fc 100644
--- a/gnu/packages/astronomy.scm
+++ b/gnu/packages/astronomy.scm
@@ -2602,55 +2602,46 @@ (define-public python-pyerfa
(define-public python-pynbody
(package
(name "python-pynbody")
- (version "1.2.3")
+ (version "1.3.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pynbody" version))
(sha256
- (base32 "1jxwk2s4qz1znvyak2lj7ld01kl1jh87xp81ki7a8dz1gcy93fkx"))))
- (build-system python-build-system)
+ (base32 "1yp7ja66zqmbnh7bbwbyimxq1nkrmjrcif2rzfm1hswm0fp2fbga"))))
+ (build-system pyproject-build-system)
(arguments
- (list #:phases
- #~(modify-phases %standard-phases
- (add-after 'unpack 'disable-tests-require-testdata
- (lambda _
- ;; Disable tests which need to download additional 1.0GiB+
- ;; of test data archive from
- ;; http://star.ucl.ac.uk/~app/testdata.tar.gz
- ;; https://github.com/pynbody/pynbody/blob/ \
- ;; f4bd482dc47532831b3ec115c7cb07149d61bfc5/ \
- ;; .github/workflows/build-test.yaml#L41
- (with-directory-excursion "tests"
- (for-each delete-file
- '("gravity_test.py"
- "adaptahop_test.py"
- "ahf_halos_test.py"
- "array_test.py"
- "bridge_test.py"
- "family_test.py"
- "partial_tipsy_test.py"
- "snapshot_test.py"
- "test_profile.py"
- "gadget_test.py"
- "gadgethdf_test.py"
- "grafic_test.py"
- "halotools_test.py"
- "nchilada_test.py"
- "ramses_new_ptcl_format_test.py"
- "ramses_test.py"
- "rockstar_test.py"
- "sph_image_test.py"
- "sph_smooth_test.py"
- "subfind_test.py"
- "subfindhdf_gadget4_test.py"
- "tipsy_test.py")))))
- (replace 'check
- (lambda* (#:key tests? inputs outputs #:allow-other-keys)
- (when tests?
- (add-installed-pythonpath inputs outputs)
- (setenv "HOME" "/tmp")
- (invoke "pytest" "-vv")))))))
+ (list
+ #:test-flags
+ #~(list
+ ;; Disable tests which need to download additional 1.0GiB+
+ ;; of test data archive from
+ ;; http://star.ucl.ac.uk/~app/testdata.tar.gz
+ ;; https://github.com/pynbody/pynbody/blob/ \
+ ;; f4bd482dc47532831b3ec115c7cb07149d61bfc5/ \
+ ;; .github/workflows/build-test.yaml#L41
+ "--ignore=tests/gravity_test.py"
+ "--ignore=tests/adaptahop_test.py"
+ "--ignore=tests/ahf_halos_test.py"
+ "--ignore=tests/array_test.py"
+ "--ignore=tests/bridge_test.py"
+ "--ignore=tests/family_test.py"
+ "--ignore=tests/partial_tipsy_test.py"
+ "--ignore=tests/snapshot_test.py"
+ "--ignore=tests/test_profile.py"
+ "--ignore=tests/gadget_test.py"
+ "--ignore=tests/gadgethdf_test.py"
+ "--ignore=tests/grafic_test.py"
+ "--ignore=tests/halotools_test.py"
+ "--ignore=tests/nchilada_test.py"
+ "--ignore=tests/ramses_new_ptcl_format_test.py"
+ "--ignore=tests/ramses_test.py"
+ "--ignore=tests/rockstar_test.py"
+ "--ignore=tests/sph_image_test.py"
+ "--ignore=tests/sph_smooth_test.py"
+ "--ignore=tests/subfind_test.py"
+ "--ignore=tests/subfindhdf_gadget4_test.py"
+ "--ignore=tests/tipsy_test.py")))
(native-inputs
(list python-cython
python-pandas
--
2.39.2
- [bug#63542] [PATCH v2 04/20] gnu: python-sunpy: Update to 4.1.5., (continued)
- [bug#63542] [PATCH v2 04/20] gnu: python-sunpy: Update to 4.1.5., Sharlatan Hellseher, 2023/05/24
- [bug#63542] [PATCH v2 06/20] gnu: python-sgp4: Update to 2.22., Sharlatan Hellseher, 2023/05/24
- [bug#63542] [PATCH v2 12/20] gnu: python-astroquery: Use Gexp., Sharlatan Hellseher, 2023/05/24
- [bug#63542] [PATCH v2 14/20] gnu: python-astral: Update to 3.2., Sharlatan Hellseher, 2023/05/24
- [bug#63542] [PATCH v2 10/20] gnu: python-fitsio: Use Gexp., Sharlatan Hellseher, 2023/05/24
- [bug#63542] [PATCH v2 17/20] gnu: python-ephem: Update to 4.1.4., Sharlatan Hellseher, 2023/05/24
- [bug#63542] [PATCH v2 08/20] gnu: python-reproject: Update to 0.10.0., Sharlatan Hellseher, 2023/05/24
- [bug#63542] [PATCH v2 09/20] gnu: python-pyvo: Update to 1.4.1., Sharlatan Hellseher, 2023/05/24
- [bug#63542] [PATCH v2 11/20] gnu: python-astropy-healpix: Use Gexp., Sharlatan Hellseher, 2023/05/24
- [bug#63542] [PATCH v2 15/20] gnu: python-poppy: Update to 1.1.1., Sharlatan Hellseher, 2023/05/24
- [bug#63542] [PATCH v2 13/20] gnu: python-pynbody: Update to 1.3.1, simplify.,
Sharlatan Hellseher <=
- [bug#63542] [PATCH v2 16/20] gnu: python-photutils: Update to 1.7.0., Sharlatan Hellseher, 2023/05/24
- [bug#63542] [PATCH v2 18/20] gnu: python-asdf: Update to 2.15.0., Sharlatan Hellseher, 2023/05/24
- [bug#63542] [PATCH v2 20/20] gnu: python-asdf: Enable tests., Sharlatan Hellseher, 2023/05/24
- [bug#63542] [PATCH v2 19/20] gnu: python-asdf-coordinates-schemas: Update to 0.2.0., Sharlatan Hellseher, 2023/05/24
- bug#63542: [PATCH v2 00/20]: Cover review points., Vinicius Monego, 2023/05/25