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45/47: gnu: Add r-acmeeqtl.

From: guix-commits
Subject: 45/47: gnu: Add r-acmeeqtl.
Date: Fri, 13 Dec 2019 16:42:23 -0500 (EST)

rekado pushed a commit to branch master
in repository guix.

commit 73f055df34b1d174544e0232b5aaf1d735f90d9e
Author: Ricardo Wurmus <address@hidden>
Date:   Fri Dec 13 19:24:31 2019 +0100

    gnu: Add r-acmeeqtl.
    * gnu/packages/cran.scm (r-acmeeqtl): New variable.
 gnu/packages/cran.scm | 25 +++++++++++++++++++++++++
 1 file changed, 25 insertions(+)

diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index ddbd8de..943a1b6 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -17186,3 +17186,28 @@ as with usual R matrices.  It supports very large 
matrices; the package has
 been tested on multi-terabyte matrices.  It allows for more than 2^32 rows or
 columns, ad allows for quick addition of extra columns to a filematrix.")
     (license license:lgpl3)))
+(define-public r-acmeeqtl
+  (package
+    (name "r-acmeeqtl")
+    (version "1.6")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (cran-uri "ACMEeqtl" version))
+       (sha256
+        (base32
+         "049xjv2ym35bbn43zwi68cq27fwdh404vp0r2ca5gxgmmx8kj1cz"))))
+    (properties `((upstream-name . "ACMEeqtl")))
+    (build-system r-build-system)
+    (propagated-inputs
+     `(("r-filematrix" ,r-filematrix)))
+    (home-page "";)
+    (synopsis "Estimation of interpretable eQTL effect sizes")
+    (description
+     "This package provides a non-linear model, termed ACME, that reflects a
+parsimonious biological model for allelic contributions of cis-acting eQTLs.
+With non-linear least-squares algorithm the maximum likelihood parameters can
+be estimated.  The ACME model provides interpretable effect size estimates and
+p-values with well controlled Type-I error.")
+    (license license:lgpl3)))

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