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190/296: gnu: r-motifdb: Update to 1.30.0.
From: |
guix-commits |
Subject: |
190/296: gnu: r-motifdb: Update to 1.30.0. |
Date: |
Fri, 12 Jun 2020 19:30:21 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit da6a75fe0032e1485db36aac4762223a0e170e1f
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Sat Jun 13 00:50:57 2020 +0200
gnu: r-motifdb: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-motifdb): Update to 1.30.0.
[propagated-inputs]: Add r-genomicranges.
[native-inputs]: Add r-knitr.
---
gnu/packages/bioconductor.scm | 7 +++++--
1 file changed, 5 insertions(+), 2 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index d906b4d..c638749 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -4209,21 +4209,24 @@ distributions, modules and filter motifs.")
(define-public r-motifdb
(package
(name "r-motifdb")
- (version "1.28.0")
+ (version "1.30.0")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "MotifDb" version))
(sha256
- (base32 "0m5apkjlvdq9yhjdyds3hivfnkbm6f059hy2bkjhalrlhd2si2jc"))))
+ (base32 "0ixmdqp0s0xv9ar85n2wirbbssrzlk8a892wam55jdsf9y8aabkm"))))
(properties `((upstream-name . "MotifDb")))
(build-system r-build-system)
(propagated-inputs
`(("r-biocgenerics" ,r-biocgenerics)
("r-biostrings" ,r-biostrings)
+ ("r-genomicranges" ,r-genomicranges)
("r-iranges" ,r-iranges)
("r-rtracklayer" ,r-rtracklayer)
("r-s4vectors" ,r-s4vectors)
("r-splitstackshape" ,r-splitstackshape)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
(home-page "https://www.bioconductor.org/packages/MotifDb/")
(synopsis "Annotated collection of protein-DNA binding sequence motifs")
(description "This package provides more than 2000 annotated position
- 294/296: gnu: r-biocworkflowtools: Update to 1.14.0., (continued)
- 294/296: gnu: r-biocworkflowtools: Update to 1.14.0., guix-commits, 2020/06/12
- 157/296: gnu: r-scdd: Update to 1.12.0., guix-commits, 2020/06/12
- 163/296: gnu: r-minfi: Update to 1.34.0., guix-commits, 2020/06/12
- 167/296: gnu: r-ioniser: Update to 2.12.0., guix-commits, 2020/06/12
- 174/296: gnu: r-fgsea: Update to 1.14.0., guix-commits, 2020/06/12
- 178/296: gnu: r-mlinterfaces: Update to 1.68.0., guix-commits, 2020/06/12
- 181/296: gnu: r-a4classif: Update to 1.36.0., guix-commits, 2020/06/12
- 185/296: gnu: r-a4: Update to 1.36.0., guix-commits, 2020/06/12
- 184/296: gnu: r-a4base: Update to 1.36.0., guix-commits, 2020/06/12
- 183/296: gnu: r-a4reporting: Update to 1.36.0., guix-commits, 2020/06/12
- 190/296: gnu: r-motifdb: Update to 1.30.0.,
guix-commits <=
- 191/296: gnu: r-motifbreakr: Update to 2.2.0., guix-commits, 2020/06/12
- 200/296: gnu: r-aucell: Update to 1.10.0., guix-commits, 2020/06/12
- 197/296: gnu: r-annotationfuncs: Update to 1.38.0., guix-commits, 2020/06/12
- 199/296: gnu: r-allelicimbalance: Update to 1.26.0., guix-commits, 2020/06/12
- 196/296: gnu: r-abaenrichment: Update to 1.18.0., guix-commits, 2020/06/12
- 204/296: gnu: r-somaticsignatures: Update to 2.24.0., guix-commits, 2020/06/12
- 205/296: gnu: r-yapsa: Update to 1.14.0., guix-commits, 2020/06/12
- 210/296: gnu: r-yarn: Update to 1.14.0., guix-commits, 2020/06/12
- 208/296: gnu: r-yaqcaffy: Update to 1.48.0., guix-commits, 2020/06/12
- 217/296: gnu: r-widgettools: Update to 1.66.0., guix-commits, 2020/06/12