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205/296: gnu: r-yapsa: Update to 1.14.0.
From: |
guix-commits |
Subject: |
205/296: gnu: r-yapsa: Update to 1.14.0. |
Date: |
Fri, 12 Jun 2020 19:30:27 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 8a5abc62d514299bcd006efd944871755ca2b7d3
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Sat Jun 13 00:55:32 2020 +0200
gnu: r-yapsa: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-yapsa): Update to 1.14.0.
[propagated-inputs]: Add r-biostrings, r-bsgenome-hsapiens-ucsc-hg19,
r-doparallel, r-dplyr, r-ggbeeswarm, r-magrittr, and r-pracma.
[native-inputs]: Add r-knitr.
---
gnu/packages/bioconductor.scm | 15 ++++++++++++---
1 file changed, 12 insertions(+), 3 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 1db98d4..5e72cf8 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -4757,33 +4757,42 @@ decomposition algorithms.")
(define-public r-yapsa
(package
(name "r-yapsa")
- (version "1.12.0")
+ (version "1.14.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "YAPSA" version))
(sha256
(base32
- "132x51f8k8zyx6j8jk05x4lr9q1hlblgvr69wkhn0q3f8mhaj926"))))
+ "06lkf01vl4fyhj82srx8k870fhw76a1han0kp4jglh43b1c19c1k"))))
(properties `((upstream-name . "YAPSA")))
(build-system r-build-system)
(propagated-inputs
- `(("r-circlize" ,r-circlize)
+ `(("r-biostrings" ,r-biostrings)
+ ("r-bsgenome-hsapiens-ucsc-hg19" ,r-bsgenome-hsapiens-ucsc-hg19)
+ ("r-circlize" ,r-circlize)
("r-complexheatmap" ,r-complexheatmap)
("r-corrplot" ,r-corrplot)
("r-dendextend" ,r-dendextend)
+ ("r-doparallel" ,r-doparallel)
+ ("r-dplyr" ,r-dplyr)
("r-genomeinfodb" ,r-genomeinfodb)
("r-genomicranges" ,r-genomicranges)
("r-getoptlong" ,r-getoptlong)
+ ("r-ggbeeswarm" ,r-ggbeeswarm)
("r-ggplot2" ,r-ggplot2)
("r-gridextra" ,r-gridextra)
("r-gtrellis" ,r-gtrellis)
("r-keggrest" ,r-keggrest)
("r-lsei" ,r-lsei)
+ ("r-magrittr" ,r-magrittr)
("r-pmcmr" ,r-pmcmr)
+ ("r-pracma" ,r-pracma)
("r-reshape2" ,r-reshape2)
("r-somaticsignatures" ,r-somaticsignatures)
("r-variantannotation" ,r-variantannotation)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
(home-page "https://bioconductor.org/packages/YAPSA/")
(synopsis "Yet another package for signature analysis")
(description
- 185/296: gnu: r-a4: Update to 1.36.0., (continued)
- 185/296: gnu: r-a4: Update to 1.36.0., guix-commits, 2020/06/12
- 184/296: gnu: r-a4base: Update to 1.36.0., guix-commits, 2020/06/12
- 183/296: gnu: r-a4reporting: Update to 1.36.0., guix-commits, 2020/06/12
- 190/296: gnu: r-motifdb: Update to 1.30.0., guix-commits, 2020/06/12
- 191/296: gnu: r-motifbreakr: Update to 2.2.0., guix-commits, 2020/06/12
- 200/296: gnu: r-aucell: Update to 1.10.0., guix-commits, 2020/06/12
- 197/296: gnu: r-annotationfuncs: Update to 1.38.0., guix-commits, 2020/06/12
- 199/296: gnu: r-allelicimbalance: Update to 1.26.0., guix-commits, 2020/06/12
- 196/296: gnu: r-abaenrichment: Update to 1.18.0., guix-commits, 2020/06/12
- 204/296: gnu: r-somaticsignatures: Update to 2.24.0., guix-commits, 2020/06/12
- 205/296: gnu: r-yapsa: Update to 1.14.0.,
guix-commits <=
- 210/296: gnu: r-yarn: Update to 1.14.0., guix-commits, 2020/06/12
- 208/296: gnu: r-yaqcaffy: Update to 1.48.0., guix-commits, 2020/06/12
- 217/296: gnu: r-widgettools: Update to 1.66.0., guix-commits, 2020/06/12
- 216/296: gnu: r-wiggleplotr: Update to 1.12.0., guix-commits, 2020/06/12
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- 215/296: gnu: r-wrench: Update to 1.6.0., guix-commits, 2020/06/12
- 214/296: gnu: r-xcms: Update to 3.10.1., guix-commits, 2020/06/12
- 223/296: gnu: r-biocfilecache: Update to 1.12.0., guix-commits, 2020/06/12
- 225/296: gnu: r-rbowtie: Update to 1.28.0., guix-commits, 2020/06/12
- 224/296: gnu: r-iclusterplus: Update to 1.24.0., guix-commits, 2020/06/12