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214/296: gnu: r-xcms: Update to 3.10.1.
From: |
guix-commits |
Subject: |
214/296: gnu: r-xcms: Update to 3.10.1. |
Date: |
Fri, 12 Jun 2020 19:30:30 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit ff9f179a0c09dba305ae05007a52efd47a486594
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Sat Jun 13 00:56:53 2020 +0200
gnu: r-xcms: Update to 3.10.1.
* gnu/packages/bioconductor.scm (r-xcms): Update to 3.10.1.
[propagated-inputs]: Remove r-multtest; add r-summarizedexperiment.
[native-inputs]: Add r-knitr.
---
gnu/packages/bioconductor.scm | 10 ++++++----
1 file changed, 6 insertions(+), 4 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index c89489f..3db0fdc 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -5054,14 +5054,14 @@ based on @dfn{Continuous Wavelet Transform} (CWT).")
(define-public r-xcms
(package
(name "r-xcms")
- (version "3.8.2")
+ (version "3.10.1")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "xcms" version))
(sha256
(base32
- "0bfl56v3l6k31i11l09nx1yqfjy6z5yragm6k83z4w0mpgk18y7g"))))
+ "1aa11gy1v7kkamv3hsnvdx715q8f1saw9p664j6wifyjj0hx13kn"))))
(build-system r-build-system)
(propagated-inputs
`(("r-biobase" ,r-biobase)
@@ -5071,14 +5071,16 @@ based on @dfn{Continuous Wavelet Transform} (CWT).")
("r-lattice" ,r-lattice)
("r-massspecwavelet" ,r-massspecwavelet)
("r-msnbase" ,r-msnbase)
- ("r-multtest" ,r-multtest)
("r-mzr" ,r-mzr)
("r-plyr" ,r-plyr)
("r-protgenerics" ,r-protgenerics)
("r-rann" ,r-rann)
("r-rcolorbrewer" ,r-rcolorbrewer)
("r-robustbase" ,r-robustbase)
- ("r-s4vectors" ,r-s4vectors)))
+ ("r-s4vectors" ,r-s4vectors)
+ ("r-summarizedexperiment" ,r-summarizedexperiment)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
(home-page "https://bioconductor.org/packages/xcms/")
(synopsis "LC/MS and GC/MS mass spectrometry data analysis")
(description
- 199/296: gnu: r-allelicimbalance: Update to 1.26.0., (continued)
- 199/296: gnu: r-allelicimbalance: Update to 1.26.0., guix-commits, 2020/06/12
- 196/296: gnu: r-abaenrichment: Update to 1.18.0., guix-commits, 2020/06/12
- 204/296: gnu: r-somaticsignatures: Update to 2.24.0., guix-commits, 2020/06/12
- 205/296: gnu: r-yapsa: Update to 1.14.0., guix-commits, 2020/06/12
- 210/296: gnu: r-yarn: Update to 1.14.0., guix-commits, 2020/06/12
- 208/296: gnu: r-yaqcaffy: Update to 1.48.0., guix-commits, 2020/06/12
- 217/296: gnu: r-widgettools: Update to 1.66.0., guix-commits, 2020/06/12
- 216/296: gnu: r-wiggleplotr: Update to 1.12.0., guix-commits, 2020/06/12
- 213/296: gnu: r-massspecwavelet: Update to 1.54.0., guix-commits, 2020/06/12
- 215/296: gnu: r-wrench: Update to 1.6.0., guix-commits, 2020/06/12
- 214/296: gnu: r-xcms: Update to 3.10.1.,
guix-commits <=
- 223/296: gnu: r-biocfilecache: Update to 1.12.0., guix-commits, 2020/06/12
- 225/296: gnu: r-rbowtie: Update to 1.28.0., guix-commits, 2020/06/12
- 224/296: gnu: r-iclusterplus: Update to 1.24.0., guix-commits, 2020/06/12
- 227/296: gnu: r-rhisat2: Update to 1.4.0., guix-commits, 2020/06/12
- 231/296: gnu: r-birta: Update to 1.31.0., guix-commits, 2020/06/12
- 236/296: gnu: r-rsubread: Update to 2.2.2., guix-commits, 2020/06/12
- 237/296: gnu: r-flowutils: Update to 1.52.0., guix-commits, 2020/06/12
- 239/296: gnu: r-cytolib: Update to 2.0.3., guix-commits, 2020/06/12
- 241/296: gnu: r-flowmeans: Update to 1.48.0., guix-commits, 2020/06/12
- 242/296: gnu: r-ncdfflow: Update to 2.34.0., guix-commits, 2020/06/12