guix-commits
[Top][All Lists]
Advanced

[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]

36/54: gnu: r-motifrg: Move to (gnu packages bioconductor).


From: guix-commits
Subject: 36/54: gnu: r-motifrg: Move to (gnu packages bioconductor).
Date: Mon, 31 May 2021 10:03:15 -0400 (EDT)

rekado pushed a commit to branch master
in repository guix.

commit c2a18aee16a59330a005bf6818df733a2f56c425
Author: zimoun <zimon.toutoune@gmail.com>
AuthorDate: Fri May 21 22:26:08 2021 +0200

    gnu: r-motifrg: Move to (gnu packages bioconductor).
    
    * gnu/packages/bioinformatics.scm (r-motifrg): Move from here...
    * gnu/packages/bioconductor.scm (r-motifrg): ...to here.
---
 gnu/packages/bioconductor.scm   | 27 +++++++++++++++++++++++++++
 gnu/packages/bioinformatics.scm | 27 ---------------------------
 2 files changed, 27 insertions(+), 27 deletions(-)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index a4d99dd..c9f72c5 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -3129,6 +3129,33 @@ and the assessment of differential expression.  The 
analysis methods apply to
 different technologies, including microarrays, RNA-seq, and quantitative PCR.")
     (license license:gpl2+)))
 
+(define-public r-motifrg
+  (package
+    (name "r-motifrg")
+    (version "1.31.0")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (bioconductor-uri "motifRG" version))
+       (sha256
+        (base32
+         "1ml6zyzlk8yjbnfhga2qnw8nl43rankvka0kc1yljxr2b66aqbhn"))))
+    (properties `((upstream-name . "motifRG")))
+    (build-system r-build-system)
+    (propagated-inputs
+     `(("r-biostrings" ,r-biostrings)
+       ("r-bsgenome" ,r-bsgenome)
+       ("r-bsgenome-hsapiens-ucsc-hg19" ,r-bsgenome-hsapiens-ucsc-hg19)
+       ("r-iranges" ,r-iranges)
+       ("r-seqlogo" ,r-seqlogo)
+       ("r-xvector" ,r-xvector)))
+    (home-page "https://bioconductor.org/packages/motifRG";)
+    (synopsis "Discover motifs in high throughput sequencing data")
+    (description
+     "This package provides tools for discriminative motif discovery in high
+throughput genetic sequencing data sets using regression methods.")
+    (license license:artistic2.0)))
+
 (define-public r-msnbase
   (package
     (name "r-msnbase")
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index cb0fe50..8f011f0 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -8046,33 +8046,6 @@ plots the corresponding sequence logo as introduced by 
Schneider and
 Stephens (1990).")
     (license license:lgpl2.0+)))
 
-(define-public r-motifrg
-  (package
-    (name "r-motifrg")
-    (version "1.31.0")
-    (source
-     (origin
-       (method url-fetch)
-       (uri (bioconductor-uri "motifRG" version))
-       (sha256
-        (base32
-         "1ml6zyzlk8yjbnfhga2qnw8nl43rankvka0kc1yljxr2b66aqbhn"))))
-    (properties `((upstream-name . "motifRG")))
-    (build-system r-build-system)
-    (propagated-inputs
-     `(("r-biostrings" ,r-biostrings)
-       ("r-bsgenome" ,r-bsgenome)
-       ("r-bsgenome-hsapiens-ucsc-hg19" ,r-bsgenome-hsapiens-ucsc-hg19)
-       ("r-iranges" ,r-iranges)
-       ("r-seqlogo" ,r-seqlogo)
-       ("r-xvector" ,r-xvector)))
-    (home-page "https://bioconductor.org/packages/motifRG";)
-    (synopsis "Discover motifs in high throughput sequencing data")
-    (description
-     "This package provides tools for discriminative motif discovery in high
-throughput genetic sequencing data sets using regression methods.")
-    (license license:artistic2.0)))
-
 (define-public r-zlibbioc
   (package
     (name "r-zlibbioc")



reply via email to

[Prev in Thread] Current Thread [Next in Thread]