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[bug#62428] [PATCH 03/14] gnu: Add r-hybridmtest.
From: |
Mădălin Ionel Patrașcu |
Subject: |
[bug#62428] [PATCH 03/14] gnu: Add r-hybridmtest. |
Date: |
Sat, 25 Mar 2023 00:18:49 +0100 |
* gnu/packages/bioconductor.scm (r-hybridmtest): New variable.
---
gnu/packages/bioconductor.scm | 30 ++++++++++++++++++++++++++++++
1 file changed, 30 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 37b649a7d6..c58613bea3 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -16248,6 +16248,36 @@ (define-public r-rsbml
validating output, provides an S4 SBML DOM, converts SBML to R graph objects.")
(license license:artistic2.0)))
+(define-public r-hybridmtest
+ (package
+ (name "r-hybridmtest")
+ (version "1.42.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "HybridMTest" version))
+ (sha256
+ (base32 "0mv092lq8548l306ghgvh8yka1fnyvs7w1yzfjzcchj8vlsb0qns"))))
+ (properties `((upstream-name . "HybridMTest")))
+ (build-system r-build-system)
+ (propagated-inputs
+ (list r-biobase
+ r-fdrtool
+ r-mass
+ r-survival))
+ (home-page "https://bioconductor.org/packages/HybridMTest")
+ (synopsis "Hybrid multiple testing")
+ (description
+ "This package performs hybrid multiple testing that incorporates method
+selection and assumption evaluations into the analysis using @acronym{EBP,
+empirical Bayes probability} estimates obtained by Grenander density
estimation.
+For instance, for 3-group comparison analysis, Hybrid Multiple testing
considers
+EBPs as weighted EBPs between F-test and H-test with EBPs from Shapiro Wilk
test
+of normality as weigth. Instead of just using EBPs from F-test only or using
H-
+test only, this methodology combines both types of EBPs through EBPs from
Shapiro
+Wilk test of normality. This methodology uses then the law of total EBPs.")
+ (license license:gpl2+)))
+
(define-public r-hypergraph
(package
(name "r-hypergraph")
--
2.39.2
- [bug#62428] gnu: Add r-anota2seq, r-hybridmtest, r-apalyzer, r-org-sc-sgd-db, r-apcomplex, r-mdqc, , r-parody, r-arraymvout, r-arrayquality, r-beaddatapackr, r-beadarray, r-arrayqualitymetrics, r-repmis, r-setrng.., Mădălin Ionel Patrașcu, 2023/03/24
- [bug#62428] [PATCH 01/14] gnu: Add r-anota2seq., Mădălin Ionel Patrașcu, 2023/03/24
- [bug#62428], Mădălin Ionel Patrașcu, 2023/03/24
- [bug#62428] [PATCH 05/14] gnu: Add r-org-sc-sgd-db., Mădălin Ionel Patrașcu, 2023/03/24
- [bug#62428] [PATCH 08/14] gnu: Add r-parody., Mădălin Ionel Patrașcu, 2023/03/24
- [bug#62428] [PATCH 03/14] gnu: Add r-hybridmtest.,
Mădălin Ionel Patrașcu <=
- [bug#62428] [PATCH 09/14] gnu: Add r-arraymvout., Mădălin Ionel Patrașcu, 2023/03/24
- [bug#62428] [PATCH 11/14] gnu: Add r-setrng., Mădălin Ionel Patrașcu, 2023/03/24
- [bug#62428] [PATCH 07/14] gnu: Add r-mdqc., Mădălin Ionel Patrașcu, 2023/03/24
- [bug#62428] [PATCH 02/14] gnu: Add r-repmis., Mădălin Ionel Patrașcu, 2023/03/24
- [bug#62428] [PATCH 06/14] gnu: Add r-apcomplex., Mădălin Ionel Patrașcu, 2023/03/24
- [bug#62428] [PATCH 10/14] gnu: Add r-arrayquality., Mădălin Ionel Patrașcu, 2023/03/24
- [bug#62428] [PATCH 14/14] gnu: Add r-arrayqualitymetrics., Mădălin Ionel Patrașcu, 2023/03/24
- [bug#62428] [PATCH 12/14] gnu: Add r-beaddatapackr., Mădălin Ionel Patrașcu, 2023/03/24
- [bug#62428] [PATCH 13/14] gnu: Add r-beadarray., Mădălin Ionel Patrașcu, 2023/03/24