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42/296: gnu: r-genomicfeatures: Update to 1.40.0.
From: |
guix-commits |
Subject: |
42/296: gnu: r-genomicfeatures: Update to 1.40.0. |
Date: |
Fri, 12 Jun 2020 19:29:33 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit a285314e298c66b8c9a4c640672f86665ee05278
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Fri Jun 12 16:14:43 2020 +0200
gnu: r-genomicfeatures: Update to 1.40.0.
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.40.0.
[native-inputs]: Add r-knitr.
---
gnu/packages/bioinformatics.scm | 6 ++++--
1 file changed, 4 insertions(+), 2 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index ef28629..54c5f8c 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -8232,13 +8232,13 @@ as well as query and modify the browser state, such as
the current viewport.")
(define-public r-genomicfeatures
(package
(name "r-genomicfeatures")
- (version "1.38.2")
+ (version "1.40.0")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "GenomicFeatures" version))
(sha256
(base32
- "0dd226kgks50jdx5w35f3wmg95hy8aibi4kcn8p5kmqp5i8j580b"))))
+ "09ffsflk2yhhj9ivm028y3qdkvv8idgxpm4il3y9rym7shc8b3f8"))))
(properties
`((upstream-name . "GenomicFeatures")))
(build-system r-build-system)
@@ -8257,6 +8257,8 @@ as well as query and modify the browser state, such as
the current viewport.")
("r-rtracklayer" ,r-rtracklayer)
("r-s4vectors" ,r-s4vectors)
("r-xvector" ,r-xvector)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
(home-page "https://bioconductor.org/packages/GenomicFeatures")
(synopsis "Tools for working with transcript centric annotations")
(description
- 26/296: gnu: r-genomeinfodb: Update to 1.24.0., (continued)
- 26/296: gnu: r-genomeinfodb: Update to 1.24.0., guix-commits, 2020/06/12
- 29/296: gnu: r-limma: Update to 3.44.1., guix-commits, 2020/06/12
- 27/296: gnu: r-edger: Update to 3.30.3., guix-commits, 2020/06/12
- 28/296: gnu: r-variantannotation: Update to 1.34.0., guix-commits, 2020/06/12
- 30/296: gnu: r-xvector: Update to 0.28.0., guix-commits, 2020/06/12
- 36/296: gnu: r-biostrings: Update to 2.56.0., guix-commits, 2020/06/12
- 40/296: gnu: r-genomicalignments: Update to 1.24.0., guix-commits, 2020/06/12
- 41/296: gnu: r-rtracklayer: Update to 1.48.0., guix-commits, 2020/06/12
- 43/296: gnu: r-topgo: Update to 2.40.0., guix-commits, 2020/06/12
- 37/296: gnu: r-rsamtools: Update to 2.4.0., guix-commits, 2020/06/12
- 42/296: gnu: r-genomicfeatures: Update to 1.40.0.,
guix-commits <=
- 44/296: gnu: r-bsgenome: Update to 1.56.0., guix-commits, 2020/06/12
- 46/296: gnu: r-seqpattern: Update to 1.20.0., guix-commits, 2020/06/12
- 47/296: gnu: r-genomation: Update to 1.20.0., guix-commits, 2020/06/12
- 48/296: gnu: r-seqlogo: Update to 1.54.3., guix-commits, 2020/06/12
- 31/296: gnu: r-genomicranges: Update to 1.40.0., guix-commits, 2020/06/12
- 32/296: gnu: r-biobase: Update to 2.48.0., guix-commits, 2020/06/12
- 33/296: gnu: r-annotationdbi: Update to 1.50.0., guix-commits, 2020/06/12
- 34/296: gnu: r-biomart: Update to 2.44.0., guix-commits, 2020/06/12
- 51/296: gnu: r-rhtslib: Update to 1.20.0., guix-commits, 2020/06/12
- 49/296: gnu: r-motifrg: Update to 1.31.0., guix-commits, 2020/06/12