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09/15: gnu: Add r-beadarraysnp.
From: |
guix-commits |
Subject: |
09/15: gnu: Add r-beadarraysnp. |
Date: |
Tue, 7 Feb 2023 05:14:14 -0500 (EST) |
rekado pushed a commit to branch master
in repository guix.
commit d451470b5d7ce911a7c2a4f0f9e8dc062ba6f504
Author: Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de>
AuthorDate: Thu Feb 2 03:26:56 2023 +0100
gnu: Add r-beadarraysnp.
* gnu/packages/bioconductor.scm (r-beadarraysnp): New variable.
---
gnu/packages/bioconductor.scm | 20 ++++++++++++++++++++
1 file changed, 20 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 07da3c49b3..cb610dd003 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -17111,6 +17111,26 @@ variety of commonly used matrix types, including
sparse and HDF5-backed
matrices.")
(license license:gpl3)))
+(define-public r-beadarraysnp
+ (package
+ (name "r-beadarraysnp")
+ (version "1.64.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "beadarraySNP" version))
+ (sha256
+ (base32 "06hy89pclbyxjw5yf5i9bc3wr789b9pmhd9sdchgljlijs9vcj6g"))))
+ (properties `((upstream-name . "beadarraySNP")))
+ (build-system r-build-system)
+ (propagated-inputs (list r-biobase r-quantsmooth))
+ (home-page "https://bioconductor.org/packages/beadarraySNP")
+ (synopsis "Normalization and reporting of Illumina SNP bead arrays")
+ (description
+ "This package is importing data from Illumina SNP experiments and it
+performs copy number calculations and reports.")
+ (license license:gpl2)))
+
;; This package includes files that have been taken from kentutils. Some
;; parts of kentutils are not released under a free license, but this package
;; only uses files that are also found in the free parts of kentutils.
- branch master updated (8f09b385d9 -> a402c9c20f), guix-commits, 2023/02/07
- 03/15: gnu: Add r-pd-mapping50k-xba240., guix-commits, 2023/02/07
- 06/15: gnu: Add r-tilingarray., guix-commits, 2023/02/07
- 02/15: gnu: Add r-italicsdata., guix-commits, 2023/02/07
- 04/15: gnu: Add r-italics., guix-commits, 2023/02/07
- 12/15: gnu: azr3: Remove trailing #T from build phase., guix-commits, 2023/02/07
- 08/15: gnu: Add r-quantsmooth., guix-commits, 2023/02/07
- 09/15: gnu: Add r-beadarraysnp.,
guix-commits <=
- 11/15: gnu: azr3: Remove lash., guix-commits, 2023/02/07
- 15/15: gnu: azr3: Use JACK 2., guix-commits, 2023/02/07
- 07/15: gnu: Add r-snapcgh., guix-commits, 2023/02/07
- 10/15: gnu: Add r-adacgh2., guix-commits, 2023/02/07
- 01/15: gnu: Add r-glad., guix-commits, 2023/02/07
- 13/15: gnu: azr3: Use Gexp., guix-commits, 2023/02/07
- 14/15: gnu: azr3: Update to 1.2.3-1.3391a0a., guix-commits, 2023/02/07
- 05/15: gnu: Add r-manor., guix-commits, 2023/02/07